Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041584_P001 | Maize | cytosol | 80.9 | 82.11 |
| TraesCS5A01G087400.1 | Wheat | cytosol | 62.43 | 73.1 |
| Os12t0564800-01 | Rice | plastid | 74.08 | 72.56 |
| TraesCS5D01G098700.1 | Wheat | cytosol | 71.46 | 71.68 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 71.46 | 71.61 |
| TraesCS5D01G098800.2 | Wheat | plastid | 65.79 | 68.75 |
| EES16173 | Sorghum | cytosol | 54.46 | 57.48 |
| KXG28987 | Sorghum | cytosol | 46.9 | 48.27 |
| OQU79403 | Sorghum | endoplasmic reticulum, extracellular | 33.16 | 46.95 |
| OQU80417 | Sorghum | plasma membrane | 42.39 | 43.12 |
| KXG25270 | Sorghum | cytosol | 41.97 | 42.6 |
| OQU79405 | Sorghum | cytosol | 33.68 | 42.46 |
| OQU84038 | Sorghum | cytosol | 41.55 | 42.04 |
| EES08659 | Sorghum | cytosol | 40.29 | 42.01 |
| EER95860 | Sorghum | cytosol | 40.5 | 41.42 |
| OQU77418 | Sorghum | cytosol | 30.22 | 41.08 |
| EES17236 | Sorghum | plastid, vacuole | 39.24 | 40.74 |
| EES16086 | Sorghum | cytosol | 40.4 | 39.37 |
| KXG36822 | Sorghum | cytosol | 36.2 | 38.33 |
| EER97636 | Sorghum | cytosol | 37.15 | 37.74 |
| OQU83206 | Sorghum | cytosol | 37.67 | 37.55 |
| OQU83209 | Sorghum | cytosol | 37.46 | 37.42 |
| KXG24334 | Sorghum | cytosol | 36.41 | 37.19 |
| EES02901 | Sorghum | cytosol | 30.75 | 36.04 |
| KXG24574 | Sorghum | cytosol | 38.09 | 36.01 |
| KXG24573 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 27.91 | 35.05 |
| KXG21363 | Sorghum | cytosol | 37.88 | 30.7 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1B6PDF5 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | ProteinID:KXG23714.1 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| EnsemblPlants:OQU79329 | ProteinID:OQU79329 | ProteinID:OQU79329.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF37 | InterPro:RX-like_CC | EnsemblPlantsGene:SORBI_3008G131900 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000189D081 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:55816339..55821120
Molecular Weight (calculated)
109653.0 Da
IEP (calculated)
6.603
GRAVY (calculated)
-0.154
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAIVCASHG AMGSLLWKLG ALLSDEYKLL SSVKVDMMFL KAELEVMHAF LKKMSEVEVP DEQSKCWMKE VRELSYDIED SIDSFIFSLG CESNSEPRGF
101: KGFVGRCLNL FADAKTRHWI AKKIQRLKCH VIEASNRRGR YRVDDAVPRL SRTSIDPRLP ALYTETTRLV GVDGPRDKLI KLLTEREGTT TQLSVVSIVG
201: FGGLGKTTLA NEVYQKLEGQ FDYRAFVSVS QKPDIKKILR HILCQYSCRE CGNNEIWDEQ QLINTTRQFL KDKRYFIVID DIWSISAWRT IRCAFPENNC
301: SSRILTTTRI ITVAKYCCSP HRDHVYELKP LDAAHSKSLF FNRIFGSEDR CPLHLKEVSN GILKKCGGLP LAIITVASLL VTKAITKEEW EKMLKSIGSA
401: LEKDTDMEEM KKILLLSYND LPYHLKTCLL YLGVFPEDYE IKRDRLIRRW IAEGFITTEG GQDMEEIGEC YFNELINRSM IQPVGIQYDG RADACRVHDM
501: ILDLIISKSV EENFLTLCGD GNHKLLQQDK VRRLSINYHA RDDIIVPTNM IVSNVRSLTI FGYDENMPGL SNFLLLRVLD LENRVVLEYN YLRHIGRLSQ
601: LRYLRLSSRR ITALPEQIGD LQNLQTLDLR WTRIKRLPQS VVLLRRLTCL LVNSLELPEG IGNMQALQEL SEIEINCHTS VSSLLELGKL TNIRILGLNW
701: CILDTNYVTK IHADSLVMSL CKLGMLNLRS IQIQSYHSCS LDFLKDSWFP PPRRLQIFDM SIDYHFPRIP NWIISLEYLS YLDIYLTPVD EESFRTLGDL
801: PSLLFLWISS REAKPKEGVI VSSNGFRCLK EFYFTCWEIG TGLSFEPGAM PMLEKLRIPF NAHGVCSLHG VLDSGIWHLC SLRHLHVEII CHGARLKEVE
901: AVEEAVKNAA SYLSDELFLD VRRWDEEEIL KDEEHKLEEE EFSSYDSKSI TQY
101: KGFVGRCLNL FADAKTRHWI AKKIQRLKCH VIEASNRRGR YRVDDAVPRL SRTSIDPRLP ALYTETTRLV GVDGPRDKLI KLLTEREGTT TQLSVVSIVG
201: FGGLGKTTLA NEVYQKLEGQ FDYRAFVSVS QKPDIKKILR HILCQYSCRE CGNNEIWDEQ QLINTTRQFL KDKRYFIVID DIWSISAWRT IRCAFPENNC
301: SSRILTTTRI ITVAKYCCSP HRDHVYELKP LDAAHSKSLF FNRIFGSEDR CPLHLKEVSN GILKKCGGLP LAIITVASLL VTKAITKEEW EKMLKSIGSA
401: LEKDTDMEEM KKILLLSYND LPYHLKTCLL YLGVFPEDYE IKRDRLIRRW IAEGFITTEG GQDMEEIGEC YFNELINRSM IQPVGIQYDG RADACRVHDM
501: ILDLIISKSV EENFLTLCGD GNHKLLQQDK VRRLSINYHA RDDIIVPTNM IVSNVRSLTI FGYDENMPGL SNFLLLRVLD LENRVVLEYN YLRHIGRLSQ
601: LRYLRLSSRR ITALPEQIGD LQNLQTLDLR WTRIKRLPQS VVLLRRLTCL LVNSLELPEG IGNMQALQEL SEIEINCHTS VSSLLELGKL TNIRILGLNW
701: CILDTNYVTK IHADSLVMSL CKLGMLNLRS IQIQSYHSCS LDFLKDSWFP PPRRLQIFDM SIDYHFPRIP NWIISLEYLS YLDIYLTPVD EESFRTLGDL
801: PSLLFLWISS REAKPKEGVI VSSNGFRCLK EFYFTCWEIG TGLSFEPGAM PMLEKLRIPF NAHGVCSLHG VLDSGIWHLC SLRHLHVEII CHGARLKEVE
901: AVEEAVKNAA SYLSDELFLD VRRWDEEEIL KDEEHKLEEE EFSSYDSKSI TQY
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.