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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU83209 Sorghum cytosol 75.63 75.79
Os02t0272900-01 Rice cytosol 42.36 55.18
TraesCSU01G135400.1 Wheat cytosol 43.93 45.21
OQU79403 Sorghum endoplasmic reticulum, extracellular 31.07 44.13
TraesCS1D01G045300.1 Wheat cytosol 19.14 40.31
OQU79405 Sorghum cytosol 31.28 39.55
EES17236 Sorghum plastid, vacuole 37.45 39.0
EES16173 Sorghum cytosol 36.3 38.43
KXG28987 Sorghum cytosol 37.03 38.23
OQU79329 Sorghum plasma membrane 37.55 37.67
EER95860 Sorghum cytosol 36.19 37.12
KXG25270 Sorghum cytosol 35.46 36.1
EES08659 Sorghum cytosol 34.41 36.0
EES16086 Sorghum cytosol 36.72 35.89
OQU77418 Sorghum cytosol 26.26 35.81
OQU80417 Sorghum plasma membrane 34.52 35.22
OQU84038 Sorghum cytosol 34.62 35.14
EER97636 Sorghum cytosol 32.22 32.84
EES02901 Sorghum cytosol 27.62 32.47
KXG24574 Sorghum cytosol 33.89 32.14
KXG36822 Sorghum cytosol 29.92 31.78
KXG24334 Sorghum cytosol 29.08 29.8
KXG24573 Sorghum endoplasmic reticulum, golgi, plasma membrane 22.8 28.72
KXG21363 Sorghum cytosol 34.94 28.4
Os02t0273000-01 Rice cytosol, plasma membrane 0.63 1.23
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1Z5RHJ5GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0043531InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARCEnsemblPlants:OQU83206
ProteinID:OQU83206ProteinID:OQU83206.1ProteinID:OQU83208.1InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364
PANTHER:PTHR43889PANTHER:PTHR43889:SF21InterPro:RX-like_CCEnsemblPlantsGene:SORBI_3005G092000SUPFAM:SSF52058SUPFAM:SSF52540
UniParc:UPI000B425DF5SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:+:13601987..13608328
Molecular Weight (calculated)
107077.0 Da
IEP (calculated)
7.181
GRAVY (calculated)
-0.119
Length
956 amino acids
Sequence
(BLAST)
001: MAEVMASAAA GVMGSVIGKL GTMLTEKYKL AKDVERGIRF LQEELSTMDA VLQMLADKDD DQIDPLAKDW RSKVRELSYD IEDCIDRFML NHSHGGSKAN
101: FVRKAMRKVK TLFEDGGIAE EIQELKSLVS EQSERGKRYY DINQCLAASA QPVLLDPRAP ALFQEAMDLV GVDAPREEII QLLKCEEQQH KVVSIYGIGG
201: QGKTTLAMEV YHKITEVFDC RAFVSVSQTP DMKTLLRDIL SQISKSNFDS SERMETDQQL IRTVRQRLMD KRYFILIDDI WSVSAWELLR SALPLNNNGS
301: RIITTTRVKA VANSCCTGIA AQMYEAKPLN DDDSQRLFFK RLFFSSDDCH PDLRKVCSDI LKKCSGLPLA IISIAGLLAN RSKTLEVWNN VLRSISAAVD
401: KDSPIDKMKR ILLLSYFDLP HHLKSCLLYL SVFPEDFSID CRELILLWVA EGLIPGQDRE SMEQLGRSYL NELINRSLVQ PTKVGVDGTN VKQCRVHDVI
501: LEFIVSKAVE DNFVTIWNGD GFSRNIYSSN KIRRLSIRNV NSAQAAKEIA RTIKNGAHIR SINVYQSDSY LLRKHASEFL NSQVLRVLAI GGIFSECNLG
601: HVKSFGQLKY LGAGLQLTED AQKLQHLETL DLSWANLESI PTCITQLHKL VRLLVRSSVH LPDEIRNLQA LEELSRVNLG IQSIKFIQGL GDLTNLKVLE
701: IEWLCSIELR DMKDHKEACI STVSRLFSHL RELRVLESDP DATCLFNKAS YVPAPPPLQK LVLYTHIFNR VCPQISSLVN LSRLHIKGIN IHGDVGKEGI
801: NMIASLPVLL SLTFGFLSND EEGDSSIPYP RHAISRQGFQ RLVKFNLCCG CEALEFEPGA MPKLQMLKLR LMARCQFKFG EGGLLVGLQN LGLGLKHVAV
901: DVNCHGAVAD EVEALEDGIR GAAAVHPNCP ILQVERRNQI GMAQGCSRRP SDHAEA
Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.