Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24574 | Sorghum | cytosol | 95.65 | 72.02 |
| OQU77418 | Sorghum | cytosol | 32.94 | 35.66 |
| EES16173 | Sorghum | cytosol | 34.91 | 29.35 |
| EER95860 | Sorghum | cytosol | 35.05 | 28.54 |
| OQU79405 | Sorghum | cytosol | 28.33 | 28.44 |
| KXG28987 | Sorghum | cytosol | 34.39 | 28.19 |
| OQU79329 | Sorghum | plasma membrane | 35.05 | 27.91 |
| OQU79403 | Sorghum | endoplasmic reticulum, extracellular | 22.79 | 25.71 |
| EES08659 | Sorghum | cytosol | 30.43 | 25.27 |
| EES17236 | Sorghum | plastid, vacuole | 30.43 | 25.16 |
| KXG25270 | Sorghum | cytosol | 31.09 | 25.13 |
| EES16086 | Sorghum | cytosol | 32.02 | 24.85 |
| OQU84038 | Sorghum | cytosol | 30.83 | 24.84 |
| KXG36822 | Sorghum | cytosol | 29.38 | 24.78 |
| OQU80417 | Sorghum | plasma membrane | 30.04 | 24.33 |
| OQU83209 | Sorghum | cytosol | 29.25 | 23.27 |
| EER97636 | Sorghum | cytosol | 28.33 | 22.92 |
| OQU83206 | Sorghum | cytosol | 28.72 | 22.8 |
| EES02901 | Sorghum | cytosol | 23.72 | 22.14 |
| KXG24334 | Sorghum | cytosol | 27.01 | 21.97 |
| KXG21363 | Sorghum | cytosol | 31.75 | 20.49 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1B6PFW3 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | EnsemblPlants:KXG24573 | ProteinID:KXG24573 | ProteinID:KXG24573.1 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF16 | EnsemblPlantsGene:SORBI_3007G060800 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | UniParc:UPI00081ABDBE |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:6357267..6362798
Molecular Weight (calculated)
85952.3 Da
IEP (calculated)
5.293
GRAVY (calculated)
-0.260
Length
759 amino acids
Sequence
(BLAST)
(BLAST)
001: MHIILTLWSL ITGCIIVKIS CGRYIVVIDD VWNTEDWGFI KLALPENDRA SRIITTTRSV TVAKCCSSQV HEMEALSFDD SKRLFFRRAF GSENSCCPHL
101: EDVPDKILRK CGGLPLAIVT VSGILTNVLA KAEWDRVLSA IGSSLAKKDD AKTMTSILSL SYFDIPHHLR TCLLYLSVYS EDYEIEKQCL INRWIAEGFI
201: HEEEGQSKYE IGEGYLNDLI NRSMIQPVEV KYGQAKACRV HDIILDYIKC KAAEENFVTS LDAVQSVCTS YKVRRLCFSN HNEENVTLWA DQLLSQVRSI
301: TIFGEPVKIS FLPSTALLVL DLGECTSMKD HHLASIGKLF NLKYLRLGSP SINRLPENVG ELQHLQTLDV RGTSIKEVPR TISKLQQLAR FYVDWDARFP
401: DGMIGQMVSL EELGQYGVVS YQQEQQSNQE FSKLTKLRTL KIKWQFNLPD DSEGRSQREG IHNYVGNLLS SCNLHNLYIR ADSRQAYPLS LHSWHPAASC
501: SLRKLCIKGH AIYKVPNWMG SLGNLSVLQL SCIICLRPED VEILGEIPCL LFLKLSTVGG TNGRIIFPGN NGFRSLKYFS LRMYACGTLL KFEAGSMPKL
601: EHVEIKLFLH KMECLNGAPP SLGIQHLSAL SKVEIIIYGR SDEDDNDDNA FSCVSRAINA AIKTLSNHPT VRFDTEEYYD DGCQHFESAL RDWNEVFGGL
701: FNEWFKLWQI REEQAEQATD SETEQEDESH ENEEDGRTHE DEETSENEVA QQDDSGSNN
101: EDVPDKILRK CGGLPLAIVT VSGILTNVLA KAEWDRVLSA IGSSLAKKDD AKTMTSILSL SYFDIPHHLR TCLLYLSVYS EDYEIEKQCL INRWIAEGFI
201: HEEEGQSKYE IGEGYLNDLI NRSMIQPVEV KYGQAKACRV HDIILDYIKC KAAEENFVTS LDAVQSVCTS YKVRRLCFSN HNEENVTLWA DQLLSQVRSI
301: TIFGEPVKIS FLPSTALLVL DLGECTSMKD HHLASIGKLF NLKYLRLGSP SINRLPENVG ELQHLQTLDV RGTSIKEVPR TISKLQQLAR FYVDWDARFP
401: DGMIGQMVSL EELGQYGVVS YQQEQQSNQE FSKLTKLRTL KIKWQFNLPD DSEGRSQREG IHNYVGNLLS SCNLHNLYIR ADSRQAYPLS LHSWHPAASC
501: SLRKLCIKGH AIYKVPNWMG SLGNLSVLQL SCIICLRPED VEILGEIPCL LFLKLSTVGG TNGRIIFPGN NGFRSLKYFS LRMYACGTLL KFEAGSMPKL
601: EHVEIKLFLH KMECLNGAPP SLGIQHLSAL SKVEIIIYGR SDEDDNDDNA FSCVSRAINA AIKTLSNHPT VRFDTEEYYD DGCQHFESAL RDWNEVFGGL
701: FNEWFKLWQI REEQAEQATD SETEQEDESH ENEEDGRTHE DEETSENEVA QQDDSGSNN
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.