Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G107310.1 | Barley | cytosol | 41.09 | 72.75 |
| TraesCS3D01G485300.2 | Wheat | endoplasmic reticulum | 73.09 | 70.44 |
| TraesCS5B01G031600.1 | Wheat | endoplasmic reticulum, extracellular | 71.98 | 69.37 |
| TraesCS5B01G093500.1 | Wheat | cytosol, golgi, peroxisome | 71.54 | 68.58 |
| TraesCS3B01G541100.1 | Wheat | endoplasmic reticulum, extracellular | 73.31 | 68.46 |
| HORVU5Hr1G058640.1 | Barley | peroxisome | 20.04 | 68.3 |
| Os12t0565100-01 | Rice | cytosol | 52.93 | 68.29 |
| TraesCS5D01G098500.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.76 | 67.64 |
| HORVU7Hr1G060040.1 | Barley | cytosol | 21.04 | 66.2 |
| TraesCS5A01G087600.1 | Wheat | cytosol | 33.44 | 63.98 |
| Os12t0565200-00 | Rice | cytosol | 18.38 | 59.71 |
| OQU79329 | Sorghum | plasma membrane | 57.48 | 54.46 |
| KXG28987 | Sorghum | cytosol | 50.17 | 48.92 |
| OQU79403 | Sorghum | endoplasmic reticulum, extracellular | 33.22 | 44.58 |
| OQU79405 | Sorghum | cytosol | 34.99 | 41.8 |
| OQU84038 | Sorghum | cytosol | 43.41 | 41.61 |
| EER95860 | Sorghum | cytosol | 42.3 | 40.99 |
| OQU80417 | Sorghum | plasma membrane | 42.19 | 40.66 |
| EES17236 | Sorghum | plastid, vacuole | 40.75 | 40.09 |
| KXG25270 | Sorghum | cytosol | 40.97 | 39.4 |
| EES08659 | Sorghum | cytosol | 39.87 | 39.39 |
| OQU77418 | Sorghum | cytosol | 30.45 | 39.23 |
| EES16086 | Sorghum | cytosol | 41.53 | 38.34 |
| KXG24574 | Sorghum | cytosol | 41.53 | 37.2 |
| KXG36822 | Sorghum | cytosol | 36.77 | 36.89 |
| OQU83209 | Sorghum | cytosol | 38.87 | 36.79 |
| OQU83206 | Sorghum | cytosol | 38.43 | 36.3 |
| EER97636 | Sorghum | cytosol | 37.65 | 36.25 |
| KXG24573 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 29.35 | 34.91 |
| KXG24334 | Sorghum | cytosol | 35.77 | 34.62 |
| EES02901 | Sorghum | cytosol | 31.12 | 34.56 |
| KXG21363 | Sorghum | cytosol | 38.98 | 29.93 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:C5YPV6 | ncoils:Coil |
| EnsemblPlants:EES16173 | ProteinID:EES16173 | ProteinID:EES16173.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF5 | InterPro:RX-like_CC | EnsemblPlantsGene:SORBI_3008G132000 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | unigene:Sbi.11285 |
| UniParc:UPI0001A88586 | RefSeq:XP_002442335.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:55839853..55843326
Molecular Weight (calculated)
103208.0 Da
IEP (calculated)
6.198
GRAVY (calculated)
-0.163
Length
903 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSVLTGVMT SVIDKLTALL GEEYTKLTGV QREVNFMKDE LSSMNALLQR LAEADSDLDL QTKEWRRQVQ EMSYDIEDCV DEFMHRVGNS STTDSGGLVH
101: GVVQQLKVLW ARYQIGSKIQ DLKARVEDAN KRRVRYKVDE LAFQSSTKSA IDPRLPSLYA DPDGLVGIGR PRDDLIRMLM EGEGTSVQQL KVISIVGPGG
201: LGKTTLANEV YHRLEGQFQC RAFVSLSQQP DVKKILRNIL YQVSHQEYAN METWDEEMYF IVIDDIWSTQ AWKTIRCALY VNNCASRIMT TTRIVSIAKS
301: CCSPHHDHVY EITPLSTDNS KCLFFKRIFG SEHICPPHLE DISSEILEKC SGSPLAIVTM ASLLANKACT KQEWDRVCNS IGSTLEKDPD VEEMRRILSL
401: SFDDLPHHLK TCLLYLSIFP EDYEIERDQL VKRWIAEGFI NMEGGQDLEE IGENYFNDLI NRSMIQPMKI KCDGRVASCQ VHDMILDLLI SKSVEENFAT
501: FISGKNKTLL LQHKVRRLSL NYYSQDHTMF PSAAIISQCR SLSIFGYSEQ MPSLSKFRVL RVLDIENGEE MEHKYFEHIR RLLQLKYLRL HVRSISALPE
601: QLGELWQLRT LDLGGTKITK LPKSIVQLQN LTCLRVCNME LPEEIGNLHA LQELSEIKIN RNSMASSLLG LGSLTKLRIL RLRWCISNTD TDNRTFIDNF
701: LSSLRKLGRL NLRSLCIQSY CGYSIDFMLD SWFPTPYLLQ KFQMNLEYYF PRIPSWIASL GNLTYLDINV DPLEEETLEI LGNLPSLMCL WVSSKAAAPK
801: ERLVVSNGMF GFLKEFQFMC WRNKVGLVFE AGSMPRLEKL RIPFNAGTGL NFGIEHLSSL RHLIVEIICS GASVQEVEAL EEAMRSAADL LPNRLFLEVR
901: TWD
101: GVVQQLKVLW ARYQIGSKIQ DLKARVEDAN KRRVRYKVDE LAFQSSTKSA IDPRLPSLYA DPDGLVGIGR PRDDLIRMLM EGEGTSVQQL KVISIVGPGG
201: LGKTTLANEV YHRLEGQFQC RAFVSLSQQP DVKKILRNIL YQVSHQEYAN METWDEEMYF IVIDDIWSTQ AWKTIRCALY VNNCASRIMT TTRIVSIAKS
301: CCSPHHDHVY EITPLSTDNS KCLFFKRIFG SEHICPPHLE DISSEILEKC SGSPLAIVTM ASLLANKACT KQEWDRVCNS IGSTLEKDPD VEEMRRILSL
401: SFDDLPHHLK TCLLYLSIFP EDYEIERDQL VKRWIAEGFI NMEGGQDLEE IGENYFNDLI NRSMIQPMKI KCDGRVASCQ VHDMILDLLI SKSVEENFAT
501: FISGKNKTLL LQHKVRRLSL NYYSQDHTMF PSAAIISQCR SLSIFGYSEQ MPSLSKFRVL RVLDIENGEE MEHKYFEHIR RLLQLKYLRL HVRSISALPE
601: QLGELWQLRT LDLGGTKITK LPKSIVQLQN LTCLRVCNME LPEEIGNLHA LQELSEIKIN RNSMASSLLG LGSLTKLRIL RLRWCISNTD TDNRTFIDNF
701: LSSLRKLGRL NLRSLCIQSY CGYSIDFMLD SWFPTPYLLQ KFQMNLEYYF PRIPSWIASL GNLTYLDINV DPLEEETLEI LGNLPSLMCL WVSSKAAAPK
801: ERLVVSNGMF GFLKEFQFMC WRNKVGLVFE AGSMPRLEKL RIPFNAGTGL NFGIEHLSSL RHLIVEIICS GASVQEVEAL EEAMRSAADL LPNRLFLEVR
901: TWD
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.