CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17236	Sorghum	plastid, vacuole	78.9	57.84
OQU79405	Sorghum	cytosol	63.3	56.35
EES16086	Sorghum	cytosol	57.95	39.88
EER95860	Sorghum	cytosol	46.95	33.91
EES16173	Sorghum	cytosol	44.58	33.22
OQU79329	Sorghum	plasma membrane	46.95	33.16
KXG28987	Sorghum	cytosol	43.69	31.75
OQU84038	Sorghum	cytosol	44.13	31.53
OQU83206	Sorghum	cytosol	44.13	31.07
KXG25270	Sorghum	cytosol	42.94	30.78
OQU83209	Sorghum	cytosol	43.39	30.61
EES02901	Sorghum	cytosol	36.7	30.38
EES08659	Sorghum	cytosol	40.42	29.76
OQU80417	Sorghum	plasma membrane	41.01	29.46
EER97636	Sorghum	cytosol	39.97	28.68
KXG24574	Sorghum	cytosol	42.5	28.37
OQU77418	Sorghum	cytosol	28.83	27.67
KXG36822	Sorghum	cytosol	36.55	27.33
KXG24334	Sorghum	cytosol	36.7	26.47
KXG24573	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.71	22.79
KXG21363	Sorghum	cytosol	39.38	22.53

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1Z5R6L2	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlants:OQU79403	ProteinID:OQU79403	ProteinID:OQU79403.1	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF46	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3008G138700	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000B8B993A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:56764104..56776047

Molecular Weight (calculated)

76509.6 Da

IEP (calculated)

6.912

GRAVY (calculated)

-0.187

Length

673 amino acids

Sequence
(BLAST)

001: MTGAIVSASM GVIGTLLPKL FMLIQGEYKL QKGVKTKIAF LTNELSSMES LLVKLANNEE RLDEQLKDWR NKVRELSYDI EDCVDLFINK MSKGGDTANL
101: VKKTASTIKK IWSRRKIDKL IDELKARVEE ESERRLRYKV DDQAINFSKV VHIDPRLPAL YVEAEKLVGI EGPREKIIEF FMKNDDDDGH QLKVVSIVGF
201: GGLGKTTLAN QVYHKIKGQF NCSCFVPVSR NPNITKLLAD MLKELGSCVD PSDDERLLIE KLRALLKDKR YFIIVDDIWN TQAWEFIKSA LPENNLNSRV
301: ITTTRISNVA ASCCTGLAGY VHNIQPLSDL QSQQLFFKRV FGDISACPPH LEEVSHRILE KCHGLPLAII SIASLLAGKS NKDQWEQVYN SINSAFSHQG
401: MRDILLLSYY DLPYNLKTCL LYLSMYPEDY RIKRKELTWR WIAEGFITEV RGQTMEQIAE SYFNELVNRS LIQPIDIWYD GKAGACRVHD MVLELIVSLS
501: AEENFACIVE GQSYSGSGHK IRRLSVQSEH VGDEVMQKIM DKWSQVRSIS FYGCQEQGIC HLHELHHLRV LVLGDVNNLG YQHKYIDSIK KHIKYVGSFF
601: QLKFLTISSS CVTELPEDIG NLQYLQTLNI DGTSVRKLPP SIGHLQKLVH LLVGSCVELP DEIGDLQALQ ELS

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.