CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79405	Sorghum	cytosol	65.69	79.76
OQU79403	Sorghum	endoplasmic reticulum, extracellular	57.84	78.9
EES16086	Sorghum	cytosol	55.01	51.64
EES16173	Sorghum	cytosol	40.09	40.75
EER95860	Sorghum	cytosol	41.07	40.45
KXG28987	Sorghum	cytosol	39.98	39.63
OQU79329	Sorghum	plasma membrane	40.74	39.24
KXG25270	Sorghum	cytosol	39.0	38.13
OQU84038	Sorghum	cytosol	38.78	37.79
OQU80417	Sorghum	plasma membrane	38.56	37.78
OQU83206	Sorghum	cytosol	39.0	37.45
OQU83209	Sorghum	cytosol	38.78	37.32
EER97636	Sorghum	cytosol	36.93	36.14
EES08659	Sorghum	cytosol	35.84	36.0
OQU77418	Sorghum	cytosol	26.91	35.24
KXG36822	Sorghum	cytosol	34.1	34.78
KXG24574	Sorghum	cytosol	38.02	34.62
EES02901	Sorghum	cytosol	29.74	33.58
KXG24334	Sorghum	cytosol	31.81	31.3
KXG24573	Sorghum	endoplasmic reticulum, golgi, plasma membrane	25.16	30.43
KXG21363	Sorghum	cytosol	34.64	27.04

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:C5YQA2	EnsemblPlants:EES17236
ProteinID:EES17236	ProteinID:EES17236.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR43889	PANTHER:PTHR43889:SF46	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3008G138900	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI00081AC9D7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:56791086..56798067

Molecular Weight (calculated)

104505.0 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.212

Length

918 amino acids

Sequence
(BLAST)

001: MAGAIVSAST GVISALLPKL SMFIEQEYKL QKGVKSNIAF LVAELSSMHT LLVKLASNEE RLDVQLKDWR NKVRELSYDI EDCIDRFMHK MSKEDAGVNL
101: LKKTISMIEK IWARHKIANL IDELKARVKE EGHRRKRYKY DDQAANFSQV IQIDPRLPAL YVEARRLVGI DGPREKIIEF MENDDNGHQL KVVSIVGFGG
201: LGKTTLANQV YHKTKGQFDC SCFVPVSRNP NVAKILANML KDLESPFDPS HDERQLIDKL RAFLQDKRYF VVVDDIWSTQ AWELVKSALP ENNLNSRIIT
301: TTRITDVATS CCSSLAGYVH NIQPLSDQQS QQLFSKRVFG DTSECPPYLQ EISHRILEKC HGLPLAIITI ASLLAGKSNK DQWEQVYNSI NSAFSHQGMR
401: DILLLSYYDL PCNLKTCLLY LSMYPEDHRI DREELTWRWI AEGFITEVRG QSVEQTAESY FNELVNRSLI QPINIQYDGK AEACRVHDIV LELIVSLSAE
501: ENFACIVEEK SYSGSGHKIR RLSVQTEHVG DEVMKKIMDK LSQVRSISFY GLQEQPISHL QELHHLRVLY FYYDVGCNQH IKCIGSLFQL KCLIISSYDV
601: TELPEDIGNM RNLQTLDIRG SGVEKLPPSI GHLQKLVRLL VEPEVELPDE IGDLLALQEL LCAGIFSTNL LEALRQLTKL KTLDMDVPNR EQLGRDRGRY
701: EEALKLSVTV MGNHGLQSVK IYDYNDLLRE EHVDLLCSTS PCLRKLDVKG DGIARFPKQV GSLVNLTYLE LKFLRIQQED LCIIGGIPAL LICKLYVLDA
801: PDERLTIRSQ LFQCLKEFDY INICYGGGLE MLFLQEAMPK LQRLFLKFRA QETGSNMGFE FSFEHLASLE HIQVIIWRED ATRSRVEAAE AAIRGAVSSH
901: PGRPTLNLGY ERQGLEGP

Best Arabidopsis Sequence Match ( AT1G50180.1 )
(BLAST)

001: MAEAIVSVTV QKLGQLLLEE PLFLFGIGDQ VKQLQDELKR LNCFLKDADE KQHESERVRN WVAGIREASY DAEDILEAFF LKAESRKQKG MKRVLRRLAC
101: ILNEAVSLHS VGSEIREITS RLSKIAASML DFGIKESMGR EGLSLSDSLR EQRQSFPYVV EHNLVGLEQS LEKLVNDLVS GGEKLRVTSI CGMGGLGKTT
201: LAKQIFHHHK VRRHFDRFAW VYVSQDCRRR HVWQDIFLNL SYKDENQRIL SLRDEQLGEE LHRFLKRNKC LIVLDDIWGK DAWDCLKHVF PHETGSEIIL
301: TTRNKEVALY ADPRGVLHEP QLLTCEESWE LLEKISLSGR ENIEPMLVKK MEEIGKQIVV RCGGLPLAIT VLGGLLATKS TWNEWQRVCE NIKSYVSNGG
401: SSNGSKNMLV ADVLCLSYEY LPPHVKQCFL YFAHYPEDYE VHVGTLVSYC IAEGMVMPVK HTEAGTTVED VGQDYLEELV KRSMVMVGRR DIVTSEVMTC
501: RMHDLMREVC LQKAKQESFV QVIDSRDQDE AEAFISLSTN TSRRISVQLH GGAEEHHIKS LSQVSFRKMK LLRVLDLEGA QIEGGKLPDD VGDLIHLRNL
601: SVRLTNVKEL TSSIGNLKLM ITLDLFVKGQ LYIPNQLWDF PVGKCNPRDL LAMTSLRRLS INLSSQNTDF VVVSSLSKVL KRLRGLTINV PCEPMLPPVD
701: VTQLVSAFTN LCELELFLKL EKLPGEQSFS SDLGALRLWQ CGLVDDPFMV LEKLPNLKIL QLFEGSFVGS KLCCSKNLEN LEEWTVEDGA MMRLVTVELK
801: CCNKLKSVPE GTRFLKNLQE VEIGNRTKAF KDKLISGGED FYKVQHVPCV VFENCEL

Arabidopsis Description

Putative disease resistance protein At1g50180 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX38]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.