CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79403	Sorghum	endoplasmic reticulum, extracellular	26.47	36.7
OQU79329	Sorghum	plasma membrane	37.19	36.41
KXG25270	Sorghum	cytosol	36.44	36.21
EES16173	Sorghum	cytosol	34.62	35.77
EES08659	Sorghum	cytosol	34.94	35.67
OQU84038	Sorghum	cytosol	35.58	35.24
OQU77418	Sorghum	cytosol	26.37	35.09
EES02901	Sorghum	cytosol	30.12	34.56
KXG28987	Sorghum	cytosol	33.55	33.8
OQU79405	Sorghum	cytosol	26.9	33.2
OQU80417	Sorghum	plasma membrane	33.01	32.87
EER95860	Sorghum	cytosol	31.83	31.87
EES17236	Sorghum	plastid, vacuole	31.3	31.81
EER97636	Sorghum	cytosol	30.98	30.81
EES16086	Sorghum	cytosol	31.83	30.37
OQU83209	Sorghum	cytosol	30.65	29.98
KXG36822	Sorghum	cytosol	28.72	29.78
OQU83206	Sorghum	cytosol	29.8	29.08
KXG24574	Sorghum	cytosol	31.4	29.07
KXG24573	Sorghum	endoplasmic reticulum, golgi, plasma membrane	21.97	27.01
KXG21363	Sorghum	cytosol	32.48	25.77

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6PF67	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	EnsemblPlants:KXG24334
ProteinID:KXG24334	ProteinID:KXG24334.1	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	InterPro:RX-like_CC	EnsemblPlantsGene:SORBI_3007G027100	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI00081ADF02	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:2470382..2474242

Molecular Weight (calculated)

106283.0 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.220

Length

933 amino acids

Sequence
(BLAST)

001: MYVMATTASK AIMGVLAEKL KALLGREYDL QVGVHDDVKS LQSELEFMHA FLQDYDYASY RHYLQQTTTS AQDKVWVRKV RELAYHVEDA IDDFTCRVGP
101: APKEIPDMVK HFVYTLMARH QIAKQLRRLR LEAQELSEQR ARYPPLGTPP SSTTTVQLQW QLPPPPDETT STNLLVGIDG PRDEFIANLT SAARKHGSGR
201: RRVASMVGIA GVGKTTLAKA VYHSLEDSFQ CRAFVTVSRK PDPRRVLKDI LQQVMITTGS GSSPAIASME TWEDSQFVDR LRDNLKDKRY LIIVDDLWEI
301: PAWDRISRAL PDNSLDSMII TTTRNESVAK ACCSRHHPGH FVYKVASLKH LDSRTLFLRR TFGSEDNFPH DLEELSTKIL KKCAGLPLVI VCISSILATK
401: GKEATEWEKV YDSLGSGSND GLSWLWQAFE VSYDDLPQHL KVCLLYLSAF REDYAIRRDR LTRRWITEGF VDEKPGMSMQ EVADNNFTEL IGRNMIQAVD
501: VDCFGEIHAC KIHDVMFDLI TKKSSEENFV TFIHGKSTST QRQFVRRLSL DYGTTTDDLD LTNFNVTHVR SLTIYGNINK LDSVPLGRYL RMLDFECCEG
601: VNSRHLKDIG ELILLKYLSL KSTWISELPR QIGDLKCLET LDLTQTNIRE LPVEVARLQR LVHLLAGGAE LPQGIGNMRP LQILCIRVAC KRSKEAVKEL
701: LRLTNLRKLD MTYVHLKGKE GRKYEDECVN TLSLIMSELF KCKLQSLHLN LLGNYSISSF LRIYLTPSLI TSPPDHLQNL RIIGDYGFPY VPRWIGLLSK
801: LTDLELTVRT MLEKDVEIVA KLDRLVRFRL TVKEPSTTTK GIIVLESGFP CLKELFISCR IMPVSFNQGA MPKLEKFVLQ FHAYQGDSKR TCPSIEHLKS
901: LIKGFQFRIV VGKGLSHREV KDLKNTFKSA IFI

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.