Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79403 | Sorghum | endoplasmic reticulum, extracellular | 31.53 | 44.13 |
| EES16173 | Sorghum | cytosol | 41.61 | 43.41 |
| KXG25270 | Sorghum | cytosol | 42.57 | 42.7 |
| KXG28987 | Sorghum | cytosol | 40.87 | 41.58 |
| OQU79329 | Sorghum | plasma membrane | 42.04 | 41.55 |
| EES08659 | Sorghum | cytosol | 39.92 | 41.14 |
| OQU79405 | Sorghum | cytosol | 32.17 | 40.08 |
| EES17236 | Sorghum | plastid, vacuole | 37.79 | 38.78 |
| EER95860 | Sorghum | cytosol | 38.22 | 38.63 |
| OQU80417 | Sorghum | plasma membrane | 38.0 | 38.21 |
| EES16086 | Sorghum | cytosol | 37.9 | 36.5 |
| OQU77418 | Sorghum | cytosol | 27.07 | 36.38 |
| KXG24334 | Sorghum | cytosol | 35.24 | 35.58 |
| KXG24574 | Sorghum | cytosol | 37.9 | 35.42 |
| EER97636 | Sorghum | cytosol | 34.93 | 35.07 |
| OQU83206 | Sorghum | cytosol | 35.14 | 34.62 |
| EES02901 | Sorghum | cytosol | 29.62 | 34.32 |
| KXG36822 | Sorghum | cytosol | 32.7 | 34.22 |
| OQU83209 | Sorghum | cytosol | 34.29 | 33.86 |
| KXG24573 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 24.84 | 30.83 |
| KXG21363 | Sorghum | cytosol | 33.97 | 27.21 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A1Z5RJX6 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| EnsemblPlants:OQU84038 | ProteinID:OQU84038 | ProteinID:OQU84038.1 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF19 | InterPro:RX-like_CC | EnsemblPlantsGene:SORBI_3005G219300 | SUPFAM:SSF52047 | SUPFAM:SSF52540 |
| UniParc:UPI000B4257AA | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:70590297..70603175
Molecular Weight (calculated)
107416.0 Da
IEP (calculated)
7.575
GRAVY (calculated)
-0.276
Length
942 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEATGVMDS LLKKLGDLLA EEYTRLKGVR REIRFLRSEL NSMNAVLQKC AAMESPDVQV KAWTRELREL AYDIEDCVDE FVRGVDTKRQ RQRHGRPSCI
101: KECARRLKAL VTRHEIANQI QQLKARVVEV AEQRVRYKLD QVSSSSPCSS IRATDPRLWA LFPEESQLVG IDGPRDDLAS WLLMEDDDLA GRRRKVLSIY
201: GFGGLGKTTL ANEVRRKIGK QFDCEAVVPV SQKPDDKKIL WNILTRVDKN RTLVHEREIW DEQRIIEEIR DLLEHKRYFI IIDDIWSERD WNLLKCALPE
301: NNMGSRIITT TRIESIAKAC CSLPGDRCYK IEALSESHSR SLLFKKVFGS EDGCPDRIKH ISADILRKCS GLPLAIVCIA SLLASKPNMI EQWEKVRAST
401: GYALQIKQDP GGMESILSLS YSDLPQHLKT CLLYLSVFPE DYDIERGSLL RRWIAEGFIK EEGGLIAEDV AESYFNELIN RSMIIPVDID RSGKVRVCRL
501: HDMMLELLKS RATEENFVTI MGPGPLSTNP EGVIRRLSIQ YNDREQKLEP QEMPSLTHVR SFSTFGGSYN QTLPFAYFRV LRVLSLDCQL SGADDLKIIC
601: KLHQLKYLRL NVHELPAEIG ELRYLETLEL CSYRGVNLLP HGVTRLQHLR HLIVNWMMLL PEAIGSMQAL QTLPHFNVRD SPVSAVQELG NLKNLRDLSI
701: SWNEPAEGRC KEYLASSLNK LSSYNLQSLN IVSGQAIPVD FLASLSPPPY LLKRFWMWNS YFQRCPKWIG PLNRLTEMKL DVCEMEDEDL DLLGHLPALV
801: HFQLWVVPLR KEKIIIKRNG FRSLNAFRLW SGLPCLVFQE KSMPRLETLE LMFSACGAKS YGSTHSGIEH LHDLKNVNVT IYTDGARQSN IEAACHMIRQ
901: QIAKHPNNVR GNITYSSGYI GGVMNDGSVD EEAIVLGSEG SK
101: KECARRLKAL VTRHEIANQI QQLKARVVEV AEQRVRYKLD QVSSSSPCSS IRATDPRLWA LFPEESQLVG IDGPRDDLAS WLLMEDDDLA GRRRKVLSIY
201: GFGGLGKTTL ANEVRRKIGK QFDCEAVVPV SQKPDDKKIL WNILTRVDKN RTLVHEREIW DEQRIIEEIR DLLEHKRYFI IIDDIWSERD WNLLKCALPE
301: NNMGSRIITT TRIESIAKAC CSLPGDRCYK IEALSESHSR SLLFKKVFGS EDGCPDRIKH ISADILRKCS GLPLAIVCIA SLLASKPNMI EQWEKVRAST
401: GYALQIKQDP GGMESILSLS YSDLPQHLKT CLLYLSVFPE DYDIERGSLL RRWIAEGFIK EEGGLIAEDV AESYFNELIN RSMIIPVDID RSGKVRVCRL
501: HDMMLELLKS RATEENFVTI MGPGPLSTNP EGVIRRLSIQ YNDREQKLEP QEMPSLTHVR SFSTFGGSYN QTLPFAYFRV LRVLSLDCQL SGADDLKIIC
601: KLHQLKYLRL NVHELPAEIG ELRYLETLEL CSYRGVNLLP HGVTRLQHLR HLIVNWMMLL PEAIGSMQAL QTLPHFNVRD SPVSAVQELG NLKNLRDLSI
701: SWNEPAEGRC KEYLASSLNK LSSYNLQSLN IVSGQAIPVD FLASLSPPPY LLKRFWMWNS YFQRCPKWIG PLNRLTEMKL DVCEMEDEDL DLLGHLPALV
801: HFQLWVVPLR KEKIIIKRNG FRSLNAFRLW SGLPCLVFQE KSMPRLETLE LMFSACGAKS YGSTHSGIEH LHDLKNVNVT IYTDGARQSN IEAACHMIRQ
901: QIAKHPNNVR GNITYSSGYI GGVMNDGSVD EEAIVLGSEG SK
0001: MAGELVSFAV NKLWDLLSHE YTLFQGVEDQ VAELKSDLNL LKSFLKDADA KKHTSALVRY CVEEIKDIVY DAEDVLETFV QKEKLGTTSG IRKHIKRLTC
0101: IVPDRREIAL YIGHVSKRIT RVIRDMQSFG VQQMIVDDYM HPLRNREREI RRTFPKDNES GFVALEENVK KLVGYFVEED NYQVVSITGM GGLGKTTLAR
0201: QVFNHDMVTK KFDKLAWVSV SQDFTLKNVW QNILGDLKPK EEETKEEEKK ILEMTEYTLQ RELYQLLEMS KSLIVLDDIW KKEDWEVIKP IFPPTKGWKL
0301: LLTSRNESIV APTNTKYFNF KPECLKTDDS WKLFQRIAFP INDASEFEID EEMEKLGEKM IEHCGGLPLA IKVLGGMLAE KYTSHDWRRL SENIGSHLVG
0401: GRTNFNDDNN NSCNYVLSLS FEELPSYLKH CFLYLAHFPE DYEIKVENLS YYWAAEEIFQ PRHYDGEIIR DVGDVYIEEL VRRNMVISER DVKTSRFETC
0501: HLHDMMREVC LLKAKEENFL QITSNPPSTA NFQSTVTSRR LVYQYPTTLH VEKDINNPKL RSLVVVTLGS WNMAGSSFTR LELLRVLDLV QAKLKGGKLA
0601: SCIGKLIHLR YLSLEYAEVT HIPYSLGNLK LLIYLNLHIS LSSRSNFVPN VLMGMQELRY LALPSLIERK TKLELSNLVK LETLENFSTK NSSLEDLRGM
0701: VRLRTLTIEL IEETSLETLA ASIGGLKYLE KLEIDDLGSK MRTKEAGIVF DFVHLKRLRL ELYMPRLSKE QHFPSHLTTL YLQHCRLEED PMPILEKLLQ
0801: LKELELGHKS FSGKKMVCSS CGFPQLQKLS ISGLKEWEDW KVEESSMPLL LTLNIFDCRK LKQLPDEHLP SHLTAISLKK CGLEDPIPTL ERLVHLKELS
0901: LSELCGRIMV CTGGGFPQLH KLDLSELDGL EEWIVEDGSM PRLHTLEIRR CLKLKKLPNG FPQLQNLHLT EVEEWEEGMI VKQGSMPLLH TLYIWHCPKL
1001: PGEQHFPSHL TTVFLLGMYV EEDPMRILEK LLHLKNVSLF QSFSGKRMVC SGGGFPQLQK LSIREIEWEE WIVEQGSMPL LHTLYIGVCP NLKELPDGLR
1101: FIYSLKNLIV SKRWKKRLSE GGEDYYKVQH IPSVEFDD
0101: IVPDRREIAL YIGHVSKRIT RVIRDMQSFG VQQMIVDDYM HPLRNREREI RRTFPKDNES GFVALEENVK KLVGYFVEED NYQVVSITGM GGLGKTTLAR
0201: QVFNHDMVTK KFDKLAWVSV SQDFTLKNVW QNILGDLKPK EEETKEEEKK ILEMTEYTLQ RELYQLLEMS KSLIVLDDIW KKEDWEVIKP IFPPTKGWKL
0301: LLTSRNESIV APTNTKYFNF KPECLKTDDS WKLFQRIAFP INDASEFEID EEMEKLGEKM IEHCGGLPLA IKVLGGMLAE KYTSHDWRRL SENIGSHLVG
0401: GRTNFNDDNN NSCNYVLSLS FEELPSYLKH CFLYLAHFPE DYEIKVENLS YYWAAEEIFQ PRHYDGEIIR DVGDVYIEEL VRRNMVISER DVKTSRFETC
0501: HLHDMMREVC LLKAKEENFL QITSNPPSTA NFQSTVTSRR LVYQYPTTLH VEKDINNPKL RSLVVVTLGS WNMAGSSFTR LELLRVLDLV QAKLKGGKLA
0601: SCIGKLIHLR YLSLEYAEVT HIPYSLGNLK LLIYLNLHIS LSSRSNFVPN VLMGMQELRY LALPSLIERK TKLELSNLVK LETLENFSTK NSSLEDLRGM
0701: VRLRTLTIEL IEETSLETLA ASIGGLKYLE KLEIDDLGSK MRTKEAGIVF DFVHLKRLRL ELYMPRLSKE QHFPSHLTTL YLQHCRLEED PMPILEKLLQ
0801: LKELELGHKS FSGKKMVCSS CGFPQLQKLS ISGLKEWEDW KVEESSMPLL LTLNIFDCRK LKQLPDEHLP SHLTAISLKK CGLEDPIPTL ERLVHLKELS
0901: LSELCGRIMV CTGGGFPQLH KLDLSELDGL EEWIVEDGSM PRLHTLEIRR CLKLKKLPNG FPQLQNLHLT EVEEWEEGMI VKQGSMPLLH TLYIWHCPKL
1001: PGEQHFPSHL TTVFLLGMYV EEDPMRILEK LLHLKNVSLF QSFSGKRMVC SGGGFPQLQK LSIREIEWEE WIVEQGSMPL LHTLYIGVCP NLKELPDGLR
1101: FIYSLKNLIV SKRWKKRLSE GGEDYYKVQH IPSVEFDD
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q0WV58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.