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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G465000.1 Wheat cytosol 27.47 56.27
TraesCS4A01G389600.1 Wheat cytosol 30.87 55.5
TraesCS6B01G116600.1 Wheat cytosol 21.85 54.91
TraesCS6B01G463900.1 Wheat cytosol 30.53 53.74
TraesCSU01G071200.1 Wheat cytosol 26.96 51.21
TraesCSU01G071000.1 Wheat endoplasmic reticulum, golgi, plastid 29.34 51.11
HORVU5Hr1G006980.1 Barley cytosol 11.56 50.94
TraesCS6B01G464400.2 Wheat cytosol, endoplasmic reticulum 32.65 50.93
TraesCS6B01G464500.1 Wheat cytosol 27.89 50.77
TraesCS6B01G463500.1 Wheat cytosol 32.4 50.46
Zm00001d007688_P002 Maize cytosol 17.86 50.12
TraesCS6B01G447100.1 Wheat cytosol 32.31 50.0
TraesCS6D01G399400.1 Wheat cytosol 37.93 49.01
HORVU6Hr1G094200.2 Barley cytosol 34.95 48.87
TraesCS2B01G574400.1 Wheat cytosol 27.64 48.58
TraesCS5D01G492200.1 Wheat cytosol 38.35 48.34
Os08t0372700-00 Rice nucleus 36.9 47.74
TraesCS6A01G414300.1 Wheat cytosol 37.16 47.71
TraesCS7D01G086700.2 Wheat cytosol 37.16 46.94
TraesCSU01G071100.1 Wheat endoplasmic reticulum, plasma membrane 36.9 46.87
TraesCS6A01G414400.1 Wheat cytosol 36.48 46.78
TraesCS6B01G446100.1 Wheat cytosol 37.41 46.76
TraesCS6B01G464900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane, plastid 36.56 46.59
TraesCS6A01G403400.1 Wheat cytosol 37.07 46.58
TraesCS6B01G464300.1 Wheat cytosol 36.99 46.52
TraesCS6A01G414000.1 Wheat cytosol 37.16 46.49
TraesCS6B01G464200.1 Wheat cytosol 37.24 46.45
TraesCS6D01G386900.1 Wheat extracellular, plasma membrane 36.82 46.36
Os08t0373000-00 Rice cytosol, endoplasmic reticulum 36.05 46.14
HORVU6Hr1G075320.1 Barley mitochondrion 37.5 46.13
TraesCSU01G171700.1 Wheat cytosol 36.73 46.1
TraesCSU01G081600.1 Wheat cytosol 36.73 46.1
TraesCS6D01G386700.1 Wheat cytosol 36.56 46.09
HORVU6Hr1G094170.1 Barley mitochondrion 37.59 46.04
TraesCSU01G083900.1 Wheat cytosol 31.46 46.02
TraesCSU01G165600.1 Wheat cytosol 36.31 45.86
TraesCS6A01G403300.1 Wheat cytosol 36.31 45.82
TraesCS5D01G557600.2 Wheat cytosol 36.39 45.73
TraesCS6B01G446800.1 Wheat cytosol 36.22 45.66
TraesCSU01G082800.1 Wheat cytosol 35.97 45.58
TraesCS6B01G465100.1 Wheat extracellular, mitochondrion, plasma membrane 37.33 45.3
TraesCS2D01G545300.1 Wheat cytosol 32.57 44.9
TraesCS6B01G465800.1 Wheat cytosol 36.05 44.26
TraesCSU01G168400.1 Wheat cytosol 27.13 44.12
TraesCS6B01G463600.1 Wheat cytosol 31.63 43.97
HORVU6Hr1G084930.1 Barley cytosol 34.86 43.66
TraesCS5B01G023600.1 Wheat cytosol 31.46 43.38
TraesCS6B01G447000.1 Wheat cytosol 31.04 42.99
TraesCS5D01G032300.1 Wheat cytosol 30.87 42.81
TraesCS6B01G464000.1 Wheat cytosol 26.45 42.78
HORVU5Hr1G006960.7 Barley cytosol 30.36 42.25
TraesCSU01G082900.1 Wheat mitochondrion 25.85 42.11
TraesCSU01G204500.1 Wheat cytosol, mitochondrion, plastid 22.02 41.91
HORVU5Hr1G007040.1 Barley cytosol 30.02 41.73
TraesCS6B01G447200.1 Wheat cytosol 25.94 41.38
TraesCS6D01G398700.1 Wheat plasma membrane 36.9 41.18
TraesCS6B01G463700.1 Wheat cytosol 21.77 40.89
OQU77418 Sorghum cytosol 24.32 40.8
TraesCSU01G203600.1 Wheat cytosol 20.32 40.24
HORVU6Hr1G092510.2 Barley cytosol, plasma membrane 22.19 39.91
TraesCSU01G179000.1 Wheat plasma membrane 22.62 39.82
OQU79403 Sorghum endoplasmic reticulum, extracellular 22.53 39.38
HORVU0Hr1G017790.1 Barley endoplasmic reticulum, golgi 23.21 39.22
TraesCSU01G196800.1 Wheat cytosol, golgi, plastid 21.51 39.04
KXG28987 Sorghum cytosol 30.7 38.98
EES16173 Sorghum cytosol 29.93 38.98
TraesCSU01G232800.1 Wheat cytosol 21.43 38.95
HORVU0Hr1G015190.1 Barley cytosol 6.72 38.92
HORVU6Hr1G092500.1 Barley mitochondrion 19.81 38.32
TraesCS6A01G403000.1 Wheat cytosol, mitochondrion, nucleus, plastid 33.59 38.24
TraesCSU01G168100.1 Wheat cytosol 19.39 38.13
OQU79329 Sorghum plasma membrane 30.7 37.88
TraesCS6B01G114200.1 Wheat cytosol 32.99 37.45
EER95860 Sorghum cytosol 29.25 36.91
OQU79405 Sorghum cytosol 22.79 35.45
TraesCS6D01G076600.1 Wheat cytosol 32.91 35.15
OQU83206 Sorghum cytosol 28.4 34.94
EES17236 Sorghum plastid, vacuole 27.04 34.64
EES16086 Sorghum cytosol 28.74 34.56
KXG24574 Sorghum cytosol 29.51 34.42
OQU83209 Sorghum cytosol 27.81 34.28
OQU84038 Sorghum cytosol 27.21 33.97
HORVU1Hr1G004870.1 Barley cytosol 3.23 33.93
EES02901 Sorghum cytosol 23.13 33.46
KXG25270 Sorghum cytosol 26.53 33.23
EES08659 Sorghum cytosol 25.68 33.04
HORVU0Hr1G015160.2 Barley cytosol, nucleus 25.43 33.0
HORVU6Hr1G014320.2 Barley cytosol 31.89 32.89
EER97636 Sorghum cytosol 26.11 32.73
KXG36822 Sorghum cytosol 24.91 32.56
KXG24334 Sorghum cytosol 25.77 32.48
OQU80417 Sorghum plasma membrane 25.6 32.12
HORVU6Hr1G092680.7 Barley cytosol 11.56 31.85
TraesCS6B01G116500.1 Wheat endoplasmic reticulum, extracellular 11.82 31.81
KXG24573 Sorghum endoplasmic reticulum, golgi, plasma membrane 20.49 31.75
TraesCSU01G235500.1 Wheat cytosol 10.12 29.9
TraesCS6B01G446700.1 Wheat extracellular 1.87 26.83
TraesCSU01G208400.1 Wheat cytosol 6.12 26.67
TraesCS4A01G389700.1 Wheat cytosol 5.78 25.86
TraesCS6D01G399100.1 Wheat plasma membrane 36.48 21.61
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1B6P6U4ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675EnsemblPlants:KXG21363ProteinID:KXG21363
ProteinID:KXG21363.1InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364
PANTHER:PTHR43889PANTHER:PTHR43889:SF9InterPro:RX-like_CCEnsemblPlantsGene:SORBI_3009G052000SUPFAM:SSF52047SUPFAM:SSF52540
UniParc:UPI00081AB78ASEG:seg::::
Description
hypothetical protein
Coordinates
chr9:-:5273681..5281736
Molecular Weight (calculated)
131750.0 Da
IEP (calculated)
6.717
GRAVY (calculated)
-0.214
Length
1176 amino acids
Sequence
(BLAST)
0001: MPDFLVSAAT GALSPVLHKL AALLGDEYKR FKGVRGEVKF LIRELEAMHA FLLKKSEEEN PDEQDKVWMK EVRELSYDID DSLDDFRVRA DADDDSAKAK
0101: PEGFIDKCKK LLQLDKTKAR RRIAKEIEKL KGQVKEVGER SARYKVCGTA VNTSSKVTVD PRALAIFENA SRLVGIDQPK QEVISFLEEE NGCFSSQQPK
0201: VVSIVGIGGI GKTTLANRVY EELKNRFQCR AFLSVSRNPD MVKILRTILS KVTGRSYYKT EVGSIQQLIM EIKEFLQTKR YFIVVDDVWD KETWDTIKCA
0301: LSDNSCGSVI ITTTRVHDVA KACCSLYSGG WVYKPKPLQE HDSKKLFHNR IFGPGNECPE NLEEVSSKIL KKCGGLPLAI IAISGLLANK ARNRVHSVIE
0401: WDQVQTSIGH GLERDSTVEG MMRILSLSYF DLPHHLKACL LYLSTFPEDY TIEKRRLVLL WVAEGFIPAE SRCTLYESGE KAFNELINRN LILPKKTYEW
0501: TREVDSCVLH DTILDFIVCK SIEDNFVTVL HNIPRLPPPS GIKIRRLSLQ GKTEGDATTL HLNQNYANVR TIISFEFPCS WLGFRFVRVL DFTGCWRLLE
0601: NHHLANIGEL LQLRYLSLSG TSITELPEEI GALQYLETLN LWGCGIIQLP TSIVRLKRLV NLLMGSLKPN GFPSGIKNMQ ALEMLYTGYL DMNAAAIYFE
0701: EIGDLTEMRH LAITMLLISN SGIIDEENYV DLIKKMASIR RLSKLHTLDV FLGDVGVMQN MLGGEAGHAV IFDGVDAILE VPWCSPSLRK LVFMVFPMSR
0801: VPRWMKSLVN IEELMLRIKN LGEESHCILG DLPALVHLTL EIINNVEGVH WTDKQRLVVS NRYGYRSLRH FRVAIIGLRF VRHSIPMLTF EAGSMPELEV
0901: LHIDFDADIT ISVSNGHLDF GLKHLSKLTE IEFYIFGTKL NGLRVQDAIK EGLDNHPNPH LHIGCNCILN EDESEQEDES EQEDNVVVCT RGGDDRMCSS
1001: TTDDNNGQWL TAALPLPTDL SFTIHHQPYH RHGASFELGH RHGQRRHRSK ARQGAAIVHG RELVQGAPVI PDHAKGTPGA APTISAVLGP RLIAAPAAQK
1101: QEAFVPPCFT FSSRSPPKAE PEQHDDLANA FSSAFDRLSL GNDHPVPGHS ATAVEAASSN TGSSSSQEGG GRQEQQ
Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.