Factsheet for TraesCS6A01G403400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G446100.1	Wheat	cytosol	90.71	90.22
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	89.21	89.4
TraesCSU01G179000.1	Wheat	plasma membrane	61.75	86.53
TraesCS6A01G403300.1	Wheat	cytosol	83.01	83.37
HORVU6Hr1G092510.2	Barley	cytosol, plasma membrane	57.05	81.65
HORVU6Hr1G092500.1	Barley	mitochondrion	52.35	80.59
HORVU6Hr1G092680.7	Barley	cytosol	35.9	78.69
TraesCS6A01G414200.1	Wheat	cytosol	41.67	71.04
TraesCS4A01G389600.1	Wheat	cytosol	47.97	68.65
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	72.76	65.92
TraesCS6A01G414400.1	Wheat	cytosol	61.0	62.27
TraesCS6A01G414300.1	Wheat	cytosol	59.51	60.81
TraesCS6A01G414000.1	Wheat	cytosol	59.94	59.68
Zm00001d007688_P002	Maize	cytosol	24.15	53.94
Os08t0372700-00	Rice	nucleus	49.68	51.16
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	50.11	51.03
TraesCS7A01G416600.1	Wheat	cytosol	41.45	43.45
TraesCS5A01G087400.1	Wheat	cytosol	37.61	43.24
TraesCS6A01G414100.1	Wheat	cytosol	16.88	41.69
TraesCS7A01G419800.1	Wheat	cytosol, endoplasmic reticulum	40.17	40.78
TraesCS1A01G409400.1	Wheat	extracellular	9.08	39.72
TraesCS4A01G314300.1	Wheat	cytosol	15.81	39.05
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	38.35	38.77
TraesCS4A01G327300.1	Wheat	cytosol	32.05	38.61
TraesCS7A01G553700.1	Wheat	cytosol	20.62	38.6
TraesCS4A01G314400.1	Wheat	cytosol	38.46	38.54
TraesCS7A01G499600.1	Wheat	cytosol	38.78	38.17
TraesCS5A01G380700.1	Wheat	cytosol, nucleus, peroxisome	37.93	37.69
TraesCS1A01G409300.1	Wheat	cytosol	11.75	37.29
TraesCS4A01G389700.1	Wheat	cytosol	10.47	37.26
TraesCS5A01G073300.1	Wheat	cytosol	30.56	37.19
TraesCS6A01G389000.1	Wheat	peroxisome	37.5	37.1
KXG21363	Sorghum	cytosol	46.58	37.07
TraesCS1A01G003100.1	Wheat	cytosol	30.98	36.9
TraesCS1A01G322200.1	Wheat	cytosol, nucleus, peroxisome	22.65	34.7
TraesCS5A01G087600.1	Wheat	cytosol	16.77	33.26
TraesCS7A01G553600.1	Wheat	nucleus	30.88	33.26
TraesCS1A01G409200.1	Wheat	cytosol	17.09	31.01

Protein Annotations

EnsemblPlants:TraesCS6A01G403400.1	EnsemblPlantsGene:TraesCS6A01G403400	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:-:610799758..610803292

Molecular Weight (calculated)

105432.0 Da

IEP (calculated)

7.237

GRAVY (calculated)

-0.127

Length

936 amino acids

Sequence
(BLAST)

001: MEAALVSAAT GALKPVLAKL GALAGDEYKR FKGVRDDIKS LTRELTAMDA FLLKMSEEED PDVQDKVWMN EVRELSYDME DSIDDFMQSV NDGDTKPDGF
101: LEKMKNSLGK LGKMKARRRI GNEIEDLKKQ IIEVAERNAR YKAREAFSKA KNATVDPRAL AIFKHASELV GIDEPKAEVI KLLTQGESTH EQMKLVSIVG
201: SGGMGKTTLA NQVYQDLKGE FKCRAFLSVS RNPDMMNIMR TIFCEVSGKD YANTEAGSIQ QLISKIADFL ADKRYFVVID DIWDVDTWHV IKLAFPVTSS
301: GSIIITTTRI NEVAESCRST PFSGDIYCIR PLKMVHSRHL FYTRLFNSEE NCPSYLKTVS EHILKKCAGL PLAIIAISGL LANIERTEGP WKQVEDSIGR
401: ALERNPSVEG MMKILSLSYF ELPAHLKSCL LCLSIFPEDS VIKKKVLINR WIAERLIHTE SGYSTSYEFG ERCFNELINR SLIQPGETDI RGIVKSCRLH
501: DTILDFIISR SIEENFVTLV GVPSLSIGTH NKVRRLSLQA SKQKELIVPR GLVLSHVRSL DVFGESVKIP SMDKFRHLRF LDFEHCDQLE NHHLENIDKL
601: FQLRYLSLRG VKKVSKLPEQ IGRLWCLEIL ELRGTSVYEL PASIVNLKRL VRLLVRGNVT LPCGISKLQE LEKLRLVSVY SQSFNFLQEF EQQQSLKVLV
701: LDFEDYNNAD RVNAENESKK TIIVASLKNL GNLLSLTVWH GPEFVRESLC PMPLSLQKLK VRGSIIPHVP NWVSSLVNLL DIRLQLAGVE QKDFYILGGL
801: PVLRCLILRI DGREIRNTSL TEEPEVTRVI VCGEVGFPCL RIFNYNSEYA VMNLTFAAGA MPKVDDLRIQ FHAAETGSLG TSGDFDLGIE NLSSLVKIRC
901: YVWGYGADSS TVEAAKAAIR EAANAHPNRP TLDLDW

Best Arabidopsis Sequence Match ( AT5G35450.1 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.