Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G414000.1 | Wheat | cytosol | 84.19 | 82.13 |
| TraesCS6B01G464900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 80.59 | 80.06 |
| HORVU6Hr1G094170.1 | Barley | mitochondrion | 79.5 | 75.94 |
| TraesCS6A01G414200.1 | Wheat | cytosol | 44.38 | 74.13 |
| TraesCSU01G235500.1 | Wheat | cytosol | 31.62 | 72.86 |
| TraesCS4A01G389600.1 | Wheat | cytosol | 51.25 | 71.87 |
| TraesCS6A01G414300.1 | Wheat | cytosol | 64.99 | 65.07 |
| TraesCS6A01G403400.1 | Wheat | cytosol | 62.27 | 61.0 |
| TraesCS6A01G403300.1 | Wheat | cytosol | 59.65 | 58.69 |
| Zm00001d007688_P002 | Maize | cytosol | 24.86 | 54.42 |
| Os08t0372700-00 | Rice | nucleus | 53.44 | 53.91 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 53.98 | 53.86 |
| TraesCS4A01G389700.1 | Wheat | cytosol | 15.27 | 53.23 |
| TraesCS6A01G403000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 56.6 | 50.24 |
| TraesCS5A01G087400.1 | Wheat | cytosol | 38.5 | 43.37 |
| TraesCS6A01G414100.1 | Wheat | cytosol | 17.78 | 43.01 |
| TraesCS7A01G416600.1 | Wheat | cytosol | 40.57 | 41.66 |
| TraesCS7A01G419800.1 | Wheat | cytosol, endoplasmic reticulum | 40.24 | 40.02 |
| TraesCS1A01G409300.1 | Wheat | cytosol | 12.76 | 39.66 |
| TraesCS7A01G553700.1 | Wheat | cytosol | 21.59 | 39.6 |
| TraesCS1A01G035900.1 | Wheat | endoplasmic reticulum, extracellular | 39.8 | 39.42 |
| TraesCS4A01G327300.1 | Wheat | cytosol | 33.15 | 39.12 |
| TraesCS4A01G314400.1 | Wheat | cytosol | 39.48 | 38.76 |
| TraesCS4A01G314300.1 | Wheat | cytosol | 15.92 | 38.52 |
| TraesCS1A01G409400.1 | Wheat | extracellular | 8.94 | 38.32 |
| TraesCS7A01G499600.1 | Wheat | cytosol | 39.59 | 38.17 |
| TraesCS5A01G380700.1 | Wheat | cytosol, nucleus, peroxisome | 39.04 | 38.0 |
| TraesCS5A01G073300.1 | Wheat | cytosol | 31.84 | 37.97 |
| TraesCS1A01G003100.1 | Wheat | cytosol | 31.52 | 36.77 |
| TraesCS6A01G389000.1 | Wheat | peroxisome | 37.73 | 36.58 |
| KXG21363 | Sorghum | cytosol | 46.78 | 36.48 |
| TraesCS1A01G322200.1 | Wheat | cytosol, nucleus, peroxisome | 23.45 | 35.19 |
| TraesCS7A01G553600.1 | Wheat | nucleus | 32.72 | 34.52 |
| TraesCS5A01G087600.1 | Wheat | cytosol | 17.45 | 33.9 |
| TraesCS1A01G409200.1 | Wheat | cytosol | 18.32 | 32.56 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G414400.1 | EnsemblPlantsGene:TraesCS6A01G414400 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF9 | PFAM:PF00931 | PRINTS:PR00364 |
| SEG:seg | SUPFAM:SSF52058 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6A:-:614791135..614795166
Molecular Weight (calculated)
103229.0 Da
IEP (calculated)
6.848
GRAVY (calculated)
-0.090
Length
917 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEAALVSV ATGALKPVIG KLTVLLGNEY KRFKTVRKEI KSLTNELAAM EAFLLKMSED EDPDVQDKVW MNEVRELSYD MEDAIDDFMQ SIGDKDEKPD
101: GFIEKVKNSL GKLGKMKARR RIGKEIQDLK KQIIEVGDRN ARYKSRETVS NTRNAAVDPR ALAIFEHASK LVGIDEPKAE IIKLLTEEDV RALEQQQQQQ
201: LKIVSIVGSG GMGKTTLANQ MYQELKGQYE CRAFLSVSRS PNIMNILRTI LSEISGQGYS NTEAGSVQIL LSKINDFLLD KRYFVVVDDI WDVDTWDIIK
301: CAFPATSSAS RIITTTRINS VAHSCCSSFT GCIYNIRALD MVHSRQLFHR RLFKSDENCP SYLQEISEQI LEKCHGLPLA IIAISGLLAN IEKTEDLWNQ
401: VKDSIGRALE RNPNVEGMMK ILSLSYFDLP LYLKTCLLYL SVYLEDSIIN KKGLIRRWIA EGFIHRDGKY TAYELGERCF NELLNRGLIQ PGRTDIYGEV
501: KSCRVHDTIL DFIISKSIEE NFVTLLGVPN LTIGNESKVV RRLCLQGVKE GNSTGLVLSH VRSLIVVGDL VEIPSLEEFR HLRVLDLMDC SQLEDHHLEN
601: IVRLFQLRYL SLKGAEISKL PEQIGRLGCL EILDLRRTRV RELPASVVNL RRLSHLLVDE DVKFPAGIAK MQALETLEDV DASIQPLDFL CGLGQLMNLR
701: NLQIDLGLRN LQHNKAIVSS LCKLGTQNLR SLTIHAGNNL LHEESLCLRT FEDLSFSPSA FPQVPTWVGS LKNLQRLSLI VEALKQDDLC ILGALPSLLI
801: LDLAGQTESN RKLRFSGEVG FRLLKIFIYG GWINSVDLMF GTGSMPKLEK VELNYIRIVE ANSLGFGIEN LPCLTSVKCI GVKGDDDIVE AVKTVMERGV
901: STHPNHPSLL FQRLRRF
101: GFIEKVKNSL GKLGKMKARR RIGKEIQDLK KQIIEVGDRN ARYKSRETVS NTRNAAVDPR ALAIFEHASK LVGIDEPKAE IIKLLTEEDV RALEQQQQQQ
201: LKIVSIVGSG GMGKTTLANQ MYQELKGQYE CRAFLSVSRS PNIMNILRTI LSEISGQGYS NTEAGSVQIL LSKINDFLLD KRYFVVVDDI WDVDTWDIIK
301: CAFPATSSAS RIITTTRINS VAHSCCSSFT GCIYNIRALD MVHSRQLFHR RLFKSDENCP SYLQEISEQI LEKCHGLPLA IIAISGLLAN IEKTEDLWNQ
401: VKDSIGRALE RNPNVEGMMK ILSLSYFDLP LYLKTCLLYL SVYLEDSIIN KKGLIRRWIA EGFIHRDGKY TAYELGERCF NELLNRGLIQ PGRTDIYGEV
501: KSCRVHDTIL DFIISKSIEE NFVTLLGVPN LTIGNESKVV RRLCLQGVKE GNSTGLVLSH VRSLIVVGDL VEIPSLEEFR HLRVLDLMDC SQLEDHHLEN
601: IVRLFQLRYL SLKGAEISKL PEQIGRLGCL EILDLRRTRV RELPASVVNL RRLSHLLVDE DVKFPAGIAK MQALETLEDV DASIQPLDFL CGLGQLMNLR
701: NLQIDLGLRN LQHNKAIVSS LCKLGTQNLR SLTIHAGNNL LHEESLCLRT FEDLSFSPSA FPQVPTWVGS LKNLQRLSLI VEALKQDDLC ILGALPSLLI
801: LDLAGQTESN RKLRFSGEVG FRLLKIFIYG GWINSVDLMF GTGSMPKLEK VELNYIRIVE ANSLGFGIEN LPCLTSVKCI GVKGDDDIVE AVKTVMERGV
901: STHPNHPSLL FQRLRRF
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.