Factsheet for TraesCS1A01G409200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G438200.1	Wheat	cytosol	65.12	69.14
TraesCS1D01G416200.1	Wheat	cytosol	59.11	67.18
TraesCS1A01G409300.1	Wheat	cytosol	32.95	57.63
HORVU1Hr1G089890.3	Barley	cytosol	65.12	54.99
TraesCS5A01G087600.1	Wheat	cytosol	27.71	30.3
TraesCS7A01G553600.1	Wheat	nucleus	45.93	27.27
TraesCS1A01G322200.1	Wheat	cytosol, nucleus, peroxisome	31.78	26.84
TraesCS6A01G414100.1	Wheat	cytosol	19.38	26.39
TraesCS4A01G389700.1	Wheat	cytosol	10.47	20.53
TraesCS5A01G073300.1	Wheat	cytosol	29.46	19.77
Os11t0265900-02	Rice	cytosol	35.27	19.7
TraesCS6A01G414400.1	Wheat	cytosol	32.56	18.32
TraesCS5A01G087400.1	Wheat	cytosol	28.68	18.18
TraesCS6A01G414300.1	Wheat	cytosol	32.17	18.12
TraesCS7A01G419800.1	Wheat	cytosol, endoplasmic reticulum	32.36	18.11
TraesCS5A01G380700.1	Wheat	cytosol, nucleus, peroxisome	32.95	18.05
TraesCS6A01G414000.1	Wheat	cytosol	32.36	17.77
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	31.4	17.49
TraesCS7A01G499600.1	Wheat	cytosol	31.98	17.35
TraesCS6A01G389000.1	Wheat	peroxisome	31.78	17.34
TraesCS6A01G403400.1	Wheat	cytosol	31.01	17.09
TraesCS6A01G403300.1	Wheat	cytosol	30.23	16.74
TraesCS4A01G314400.1	Wheat	cytosol	30.23	16.7
TraesCS4A01G327300.1	Wheat	cytosol	24.03	15.96
TraesCS7A01G416600.1	Wheat	cytosol	26.55	15.34
TraesCS4A01G389600.1	Wheat	cytosol	19.19	15.14
TraesCS1A01G003100.1	Wheat	cytosol	22.29	14.63
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	29.07	14.52
TraesCS7A01G553700.1	Wheat	cytosol	12.21	12.6
TraesCS6A01G414200.1	Wheat	cytosol	11.82	11.11
TraesCS1D01G416300.1	Wheat	cytosol	1.36	2.08
TraesCS1B01G438300.1	Wheat	cytosol	0.97	1.61
TraesCS5B01G019300.1	Wheat	cytosol	0.58	1.23
HORVU1Hr1G089930.4	Barley	cytosol	0.58	1.06
TraesCS4A01G314300.1	Wheat	cytosol	0.19	0.26
TraesCS1A01G409400.1	Wheat	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1A01G409200.1	EnsemblPlantsGene:TraesCS1A01G409200	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR43889
PANTHER:PTHR43889:SF46	SEG:seg	SUPFAM:SSF52047	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1A:-:570860168..570864952

Molecular Weight (calculated)

58997.1 Da

IEP (calculated)

7.357

GRAVY (calculated)

-0.083

Length

516 amino acids

Sequence
(BLAST)

001: MKDIFLHSYL DLPHHLKTCL LYLCIYPEDS MINIKLLKWK WIAEGFIATQ WGSLDQVAHN CFNELVNRNM IHPVYGNYGS SVKYCRVHDM VLDLIISLSD
101: EENFATVLNG RICNSFPNKI RRLSMQSSGE GHKGAVDAIT ETTVHVRSLT LFMLHKQIPH LVDFHALRVL DLEECYWLEN KHVKHIGSSC QLRYLRIGGF
201: KITELPGEIG KLQHLETLDL RDCDSLLRLP STVAELRKLL RLFVSRNTQL PAGGFRSLQA LEELSFQETD DPVRFAEEVN ESGKCNLRYL RTGGEIAKRL
301: FCSPCCTYPC LQVLKIESIF RVEMVPRGMA SLKNLVKLCI WVKEFDKEGL QVLMGMPSLA HLELGIIGGA NEKLIIGTDG FKLLKVFYFH YLRPRFAVEV
401: KPTGGLRLTF APGAMQALHY LRLDLNPMFV ASDFFEDLGV EHLPGLAQLE VEISCFRAAP RRVKALECSV EKANNLLPKC RIRVSRALED YMLKDDKEWE
501: EVVANRISGE ERRPEE

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.