Factsheet for TraesCS4A01G314300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0132700-01	Rice	cytosol	43.27	58.36
TraesCS1A01G409400.1	Wheat	extracellular	22.96	40.65
TraesCS5D01G557500.1	Wheat	cytosol	93.93	37.67
TraesCS5B01G565500.1	Wheat	cytosol	80.74	32.94
TraesCS4A01G314400.1	Wheat	cytosol	80.74	32.76
TraesCS4A01G327300.1	Wheat	cytosol	66.23	32.3
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	66.49	27.21
TraesCS7A01G553700.1	Wheat	cytosol	35.62	27.0
TraesCS6A01G414200.1	Wheat	cytosol	38.79	26.78
TraesCS6A01G389000.1	Wheat	peroxisome	65.7	26.32
TraesCS4A01G389600.1	Wheat	cytosol	38.26	22.17
TraesCS5A01G087400.1	Wheat	cytosol	44.33	20.64
TraesCS1A01G003100.1	Wheat	cytosol	38.52	18.58
TraesCS5A01G380700.1	Wheat	cytosol, nucleus, peroxisome	44.85	18.05
TraesCS7A01G499600.1	Wheat	cytosol	43.01	17.14
TraesCS7A01G419800.1	Wheat	cytosol, endoplasmic reticulum	41.69	17.14
TraesCS6A01G414300.1	Wheat	cytosol	39.31	16.27
TraesCS6A01G414000.1	Wheat	cytosol	40.11	16.17
TraesCS6A01G414400.1	Wheat	cytosol	38.52	15.92
TraesCS6A01G403400.1	Wheat	cytosol	39.05	15.81
TraesCS7A01G416600.1	Wheat	cytosol	37.2	15.79
TraesCS6A01G403300.1	Wheat	cytosol	37.99	15.45
TraesCS7A01G553600.1	Wheat	nucleus	31.93	13.92
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	36.68	13.46
TraesCS5A01G073300.1	Wheat	cytosol	25.86	12.74
TraesCS1A01G322200.1	Wheat	cytosol, nucleus, peroxisome	6.86	4.26
TraesCS5A01G087600.1	Wheat	cytosol	0.79	0.64
TraesCS4A01G389700.1	Wheat	cytosol	0.26	0.38
TraesCS1A01G409200.1	Wheat	cytosol	0.26	0.19
TraesCS6A01G414100.1	Wheat	cytosol	0.0	0.0
TraesCS1A01G409300.1	Wheat	cytosol	0.0	0.0
Os10t0133000-00	Rice	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS4A01G314300.1	EnsemblPlantsGene:TraesCS4A01G314300	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889
PANTHER:PTHR43889:SF19	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:604772917..604775106

Molecular Weight (calculated)

42709.5 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.315

Length

379 amino acids

Sequence
(BLAST)

001: MEVVSASHGA FAPLLGKLAT LLADKCARLK GVRREIRSLR SELASMHAAL KEYTKLEDQN DQVKTWISLV RELAYDTEDI FDKFIHQLGS GSHHGGFKEF
101: FRKTARRLKT LGSRRGIADQ IDDLKDRIKQ VKDLKDSYKL DYAPSSIAGP PVVDPRLHAI FADEAHLVGV DGPRDDLAKW ILEANNLSKG CKVLSIVGFG
201: GLGKTTLANE VCRKIEGNFH CKAFVSVSQK PDVKKIIKDV ISQVPCEDGS TKDTSDWDEK KSIAKLRELL QNKRYLIIID DVWSTKAWHA IKCAFPENNC
301: SSRIIATTRI IDVAKSCCLS ADDRVYKLKA LSDLHSRRLF FKRLFGSEED CPEMLKEVSN KILRNVEAYH WQLSAYLVC

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.