Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G414100.1 | Wheat | cytosol | 41.44 | 28.76 |
| TraesCS7D01G086700.2 | Wheat | cytosol | 89.73 | 25.35 |
| TraesCS6B01G463700.1 | Wheat | cytosol | 58.17 | 24.44 |
| TraesCSU01G196800.1 | Wheat | cytosol, golgi, plastid | 58.94 | 23.92 |
| HORVU0Hr1G017790.1 | Barley | endoplasmic reticulum, golgi | 57.79 | 21.84 |
| TraesCS5A01G087600.1 | Wheat | cytosol | 28.9 | 16.1 |
| TraesCS6B01G464200.1 | Wheat | cytosol | 56.65 | 15.8 |
| TraesCS6A01G414000.1 | Wheat | cytosol | 56.27 | 15.74 |
| TraesCS6A01G414400.1 | Wheat | cytosol | 53.23 | 15.27 |
| TraesCS6A01G414300.1 | Wheat | cytosol | 52.09 | 14.96 |
| Os08t0372700-00 | Rice | nucleus | 36.5 | 10.56 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 36.88 | 10.55 |
| TraesCS6A01G403300.1 | Wheat | cytosol | 37.26 | 10.52 |
| TraesCS6A01G403400.1 | Wheat | cytosol | 37.26 | 10.47 |
| TraesCS1A01G409200.1 | Wheat | cytosol | 20.53 | 10.47 |
| TraesCS1A01G322200.1 | Wheat | cytosol, nucleus, peroxisome | 22.81 | 9.82 |
| TraesCS7A01G416600.1 | Wheat | cytosol | 31.94 | 9.41 |
| TraesCS5A01G073300.1 | Wheat | cytosol | 25.86 | 8.84 |
| TraesCS6A01G403000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 34.6 | 8.81 |
| TraesCS5A01G380700.1 | Wheat | cytosol, nucleus, peroxisome | 28.14 | 7.86 |
| TraesCS7A01G419800.1 | Wheat | cytosol, endoplasmic reticulum | 25.48 | 7.27 |
| TraesCS1A01G035900.1 | Wheat | endoplasmic reticulum, extracellular | 25.1 | 7.13 |
| TraesCS4A01G314400.1 | Wheat | cytosol | 24.71 | 6.96 |
| TraesCS6A01G389000.1 | Wheat | peroxisome | 24.71 | 6.87 |
| TraesCS7A01G499600.1 | Wheat | cytosol | 24.71 | 6.83 |
| TraesCS7A01G553600.1 | Wheat | nucleus | 22.43 | 6.79 |
| KXG21363 | Sorghum | cytosol | 25.86 | 5.78 |
| TraesCS5A01G087400.1 | Wheat | cytosol | 17.49 | 5.65 |
| TraesCS4A01G327300.1 | Wheat | cytosol | 9.89 | 3.35 |
| TraesCS1A01G003100.1 | Wheat | cytosol | 7.98 | 2.67 |
| Zm00001d007688_P002 | Maize | cytosol | 0.76 | 0.48 |
| TraesCS4A01G389600.1 | Wheat | cytosol | 1.14 | 0.46 |
| TraesCS4A01G314300.1 | Wheat | cytosol | 0.38 | 0.26 |
| TraesCS6B01G464500.1 | Wheat | cytosol | 0.38 | 0.15 |
| TraesCS6A01G414200.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1A01G409400.1 | Wheat | extracellular | 0.0 | 0.0 |
| TraesCS7A01G553700.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1A01G409300.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G389700.1 | EnsemblPlantsGene:TraesCS4A01G389700 | Gene3D:3.80.10.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF9 | SUPFAM:SSF52058 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:666983563..666984354
Molecular Weight (calculated)
29764.3 Da
IEP (calculated)
6.034
GRAVY (calculated)
0.037
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MQALETLKEV RFSRQPFGFL SGLGQLKNLR NLVLFFGFEE YSDTKGTNMV EGECIKSIIS SLCKLGTQDL RSLTIWDWSS LLQEPLCPLT LDKLINFSLG
101: TPQVPKWVSS LRNLQEIHLL VDEVKQDDLC ILGALPTLLI LHLEEETMSN KKFRISGEVG FQFLRIFIYE ANPHLVDLMF AAGSMPKLEK LVLSFRIVAG
201: SLDFGIKNLP CLDTVKCSTN DDDGIFRAIQ TAMERAASTH PNHPSLLFWK DVRFYLSGRP SFD
101: TPQVPKWVSS LRNLQEIHLL VDEVKQDDLC ILGALPTLLI LHLEEETMSN KKFRISGEVG FQFLRIFIYE ANPHLVDLMF AAGSMPKLEK LVLSFRIVAG
201: SLDFGIKNLP CLDTVKCSTN DDDGIFRAIQ TAMERAASTH PNHPSLLFWK DVRFYLSGRP SFD
001: MASRCELLLI CVFSLLIAFA HSKTLKRDVK ALNEIKASLG WRVVYSWVGD DPCGDGDLPP WSGVTCSTQG DYRVVTELEV YAVSIVGPFP IAVTNLLDLT
101: RLDLHNNKLT GPIPPQIGRL KRLKVLNLRW NKLQDVIPPE IGELKRLTHL YLSFNSFKGE IPKELAALPE LRYLYLQENR LIGRIPAELG TLQNLRHLDV
201: GNNHLVGTIR ELIRFDGSFP ALRNLYLNNN YLSGGIPAQL SNLTNLEIVY LSYNKFIGNI PFAIAHIPKL TYLYLDHNQF TGRIPDAFYK HPFLKEMYIE
301: GNMFKSGVNP IGTHKVLEVS DADFAV
101: RLDLHNNKLT GPIPPQIGRL KRLKVLNLRW NKLQDVIPPE IGELKRLTHL YLSFNSFKGE IPKELAALPE LRYLYLQENR LIGRIPAELG TLQNLRHLDV
201: GNNHLVGTIR ELIRFDGSFP ALRNLYLNNN YLSGGIPAQL SNLTNLEIVY LSYNKFIGNI PFAIAHIPKL TYLYLDHNQF TGRIPDAFYK HPFLKEMYIE
301: GNMFKSGVNP IGTHKVLEVS DADFAV
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4K217]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.