Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G428100.3 | Wheat | cytosol | 86.36 | 85.55 |
| HORVU6Hr1G090470.10 | Barley | extracellular, plasma membrane | 80.66 | 80.32 |
| KXG25270 | Sorghum | cytosol | 71.35 | 71.89 |
| TraesCS4A01G314300.1 | Wheat | cytosol | 26.32 | 65.7 |
| TraesCS4A01G327300.1 | Wheat | cytosol | 53.17 | 64.74 |
| TraesCS1A01G035900.1 | Wheat | endoplasmic reticulum, extracellular | 60.57 | 61.88 |
| TraesCS4A01G314400.1 | Wheat | cytosol | 59.83 | 60.6 |
| Os10t0132700-01 | Rice | cytosol | 17.12 | 57.65 |
| TraesCS1A01G322200.1 | Wheat | cytosol, nucleus, peroxisome | 37.21 | 57.61 |
| TraesCS5A01G087400.1 | Wheat | cytosol | 37.0 | 43.0 |
| Os10t0133000-00 | Rice | cytosol | 7.61 | 42.11 |
| TraesCS7A01G553700.1 | Wheat | cytosol | 21.99 | 41.6 |
| TraesCS6A01G414200.1 | Wheat | cytosol | 24.1 | 41.53 |
| TraesCS1A01G409400.1 | Wheat | extracellular | 9.3 | 41.12 |
| TraesCS4A01G389600.1 | Wheat | cytosol | 28.33 | 40.98 |
| TraesCS7A01G419800.1 | Wheat | cytosol, endoplasmic reticulum | 39.43 | 40.46 |
| TraesCS1A01G409300.1 | Wheat | cytosol | 12.47 | 40.0 |
| TraesCS5A01G380700.1 | Wheat | cytosol, nucleus, peroxisome | 39.11 | 39.28 |
| TraesCS5A01G073300.1 | Wheat | cytosol | 31.61 | 38.88 |
| TraesCS6A01G414300.1 | Wheat | cytosol | 36.89 | 38.1 |
| TraesCS6A01G414400.1 | Wheat | cytosol | 36.58 | 37.73 |
| TraesCS6A01G414000.1 | Wheat | cytosol | 37.42 | 37.66 |
| TraesCS6A01G403300.1 | Wheat | cytosol | 37.0 | 37.55 |
| TraesCS6A01G403400.1 | Wheat | cytosol | 37.1 | 37.5 |
| TraesCS7A01G499600.1 | Wheat | cytosol | 36.26 | 36.07 |
| TraesCS7A01G416600.1 | Wheat | cytosol | 33.62 | 35.61 |
| TraesCS1A01G003100.1 | Wheat | cytosol | 28.33 | 34.1 |
| TraesCS7A01G553600.1 | Wheat | nucleus | 31.29 | 34.06 |
| TraesCS5A01G087600.1 | Wheat | cytosol | 16.81 | 33.69 |
| TraesCS1A01G409200.1 | Wheat | cytosol | 17.34 | 31.78 |
| TraesCS6A01G403000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 34.25 | 31.36 |
| TraesCS6A01G414100.1 | Wheat | cytosol | 12.26 | 30.61 |
| TraesCS4A01G389700.1 | Wheat | cytosol | 6.87 | 24.71 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G389000.1 | EnsemblPlantsGene:TraesCS6A01G389000 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF19 | PFAM:PF00931 | PRINTS:PR00364 |
| SEG:seg | SUPFAM:SSF52058 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr6A:-:604607404..604610875
Molecular Weight (calculated)
107616.0 Da
IEP (calculated)
8.263
GRAVY (calculated)
-0.188
Length
946 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVVSASHGV LGPLLGKLTG LLAGECARLK GVRREIRSLK SELTCMHGAV EKYTMMQDPD VQVKKWMSLL RELTYDIEDV IDKFIHQLGT PGHQQKGGFK
101: EFFRKTARRL KTLGSRRGIA NQINDLKIRL EQVKELKSSY KLDDISCQHS SVDPRLSALF VEEAHLVGTD GPRDDLANWM LEDEKGSTKR RKVLSIVGFG
201: GLGKTTLARK VYRKIQGHFH CQAFVSVSQK PNVKKIMRDF ISQLPCEEDF MEGIDTWDEP KCIGKLKELL QDKRYLIVID DIWSISAWNA IKYAFPENNF
301: CSRIIATTRI VDVARSCCLD GNGRMYEMEA LSDLHSKRLF FRRIFGSENR CPDVLKQVSN KILKKCGGLP LAIISISSLL VTKPVIKDEW ERVRRSIGSA
401: LDKNRSLDGM NNILSLSYNN LSPNLKTCLL YLCIYPEDYV IERDILVRRW IAEGFISEER GQSKQEVAEN HFYELINKSM VQPIEIGYDG KARACQVHDM
501: MLELIISKSV EDNFISLAGH GHTDLAKRDG LIRRLSVQHI DQELASTLAN EDLSHIRSLT VIASNCIKQL PRLVRFEALR VLEFQDCKNL HEYDMNGLDK
601: LFQLKYLSFR GTGMSKLPSG IVRLYGLETL DLRNTHIEEL PTGIIQLVKL QHLLITRCFF RDPYGEAKIP NGIGNMRNLH VISGFNIMKS SLCAVKELGN
701: LACLKEVHLQ LDGRGSQEYK RHEEMLLFSL CKLGTCKLQS LRIFCPDSAP TQFLDSWSPL PYNLQIFWVT TGYYLPKMPK WIVPALTNLA YLNINLIEAT
801: KEDLWLLGEM PALLRLSITF RTVQKERLTV QGAAFLCLKE FNLIRTFRCA SAIYLTFEEG ALPKLEKLEL PLFVSVAEAY GFYLGLGHLP CLRDAQVTLC
901: NDVATSSEIK SAAAASIRNE ANGHPNHPRL SIQDRTEDTY FDEEWT
101: EFFRKTARRL KTLGSRRGIA NQINDLKIRL EQVKELKSSY KLDDISCQHS SVDPRLSALF VEEAHLVGTD GPRDDLANWM LEDEKGSTKR RKVLSIVGFG
201: GLGKTTLARK VYRKIQGHFH CQAFVSVSQK PNVKKIMRDF ISQLPCEEDF MEGIDTWDEP KCIGKLKELL QDKRYLIVID DIWSISAWNA IKYAFPENNF
301: CSRIIATTRI VDVARSCCLD GNGRMYEMEA LSDLHSKRLF FRRIFGSENR CPDVLKQVSN KILKKCGGLP LAIISISSLL VTKPVIKDEW ERVRRSIGSA
401: LDKNRSLDGM NNILSLSYNN LSPNLKTCLL YLCIYPEDYV IERDILVRRW IAEGFISEER GQSKQEVAEN HFYELINKSM VQPIEIGYDG KARACQVHDM
501: MLELIISKSV EDNFISLAGH GHTDLAKRDG LIRRLSVQHI DQELASTLAN EDLSHIRSLT VIASNCIKQL PRLVRFEALR VLEFQDCKNL HEYDMNGLDK
601: LFQLKYLSFR GTGMSKLPSG IVRLYGLETL DLRNTHIEEL PTGIIQLVKL QHLLITRCFF RDPYGEAKIP NGIGNMRNLH VISGFNIMKS SLCAVKELGN
701: LACLKEVHLQ LDGRGSQEYK RHEEMLLFSL CKLGTCKLQS LRIFCPDSAP TQFLDSWSPL PYNLQIFWVT TGYYLPKMPK WIVPALTNLA YLNINLIEAT
801: KEDLWLLGEM PALLRLSITF RTVQKERLTV QGAAFLCLKE FNLIRTFRCA SAIYLTFEEG ALPKLEKLEL PLFVSVAEAY GFYLGLGHLP CLRDAQVTLC
901: NDVATSSEIK SAAAASIRNE ANGHPNHPRL SIQDRTEDTY FDEEWT
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.