Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G090550.1 | Barley | peroxisome | 64.84 | 83.58 |
| TraesCS6A01G389000.1 | Wheat | peroxisome | 80.32 | 80.66 |
| TraesCS6B01G428100.3 | Wheat | cytosol | 80.11 | 79.69 |
| KXG25270 | Sorghum | cytosol | 70.74 | 71.57 |
| HORVU5Hr1G123480.1 | Barley | cytosol | 47.89 | 66.81 |
| HORVU1Hr1G005470.2 | Barley | cytosol | 59.47 | 60.75 |
| Os10t0132700-01 | Rice | cytosol | 17.58 | 59.43 |
| HORVU1Hr1G005520.1 | Barley | cytosol | 35.89 | 56.64 |
| HORVU1Hr1G089960.1 | Barley | cytosol | 16.21 | 41.96 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 40.63 | 40.59 |
| HORVU1Hr1G089930.4 | Barley | cytosol | 11.89 | 40.07 |
| HORVU7Hr1G121200.2 | Barley | plastid | 22.42 | 39.74 |
| Os10t0133000-00 | Rice | cytosol | 7.05 | 39.18 |
| HORVU5Hr1G093970.1 | Barley | cytosol | 37.68 | 37.92 |
| HORVU6Hr1G094200.2 | Barley | cytosol | 33.47 | 37.81 |
| HORVU7Hr1G111620.1 | Barley | cytosol, nucleus | 25.79 | 37.4 |
| HORVU7Hr1G111650.1 | Barley | cytosol | 5.16 | 37.4 |
| HORVU7Hr1G111610.1 | Barley | cytosol | 25.37 | 37.36 |
| HORVU3Hr1G107310.1 | Barley | cytosol | 19.89 | 37.06 |
| HORVU6Hr1G075320.1 | Barley | mitochondrion | 36.74 | 36.51 |
| HORVU6Hr1G094170.1 | Barley | mitochondrion | 36.74 | 36.35 |
| HORVU7Hr1G110630.1 | Barley | cytosol | 33.37 | 36.35 |
| HORVU7Hr1G111630.6 | Barley | cytosol | 35.26 | 35.71 |
| HORVU6Hr1G092510.2 | Barley | cytosol, plasma membrane | 24.53 | 35.63 |
| HORVU6Hr1G084930.1 | Barley | cytosol | 35.05 | 35.46 |
| HORVU7Hr1G111700.2 | Barley | cytosol, mitochondrion, plastid | 35.58 | 35.36 |
| HORVU1Hr1G002680.2 | Barley | plasma membrane | 24.0 | 34.97 |
| HORVU3Hr1G112930.1 | Barley | cytosol | 35.79 | 34.8 |
| HORVU7Hr1G096640.2 | Barley | cytosol | 32.63 | 34.71 |
| HORVU0Hr1G017790.1 | Barley | endoplasmic reticulum, golgi | 25.37 | 34.63 |
| HORVU6Hr1G092500.1 | Barley | mitochondrion | 22.11 | 34.54 |
| HORVU5Hr1G125350.1 | Barley | cytosol | 25.16 | 34.49 |
| HORVU1Hr1G089990.1 | Barley | cytosol | 15.26 | 34.2 |
| HORVU5Hr1G006960.7 | Barley | cytosol | 30.0 | 33.73 |
| HORVU5Hr1G007040.1 | Barley | cytosol | 29.89 | 33.57 |
| HORVU7Hr1G006150.5 | Barley | plastid | 18.84 | 32.49 |
| HORVU1Hr1G004870.1 | Barley | cytosol | 3.79 | 32.14 |
| HORVU7Hr1G111710.2 | Barley | cytosol | 16.84 | 31.81 |
| HORVU7Hr1G115990.1 | Barley | mitochondrion | 35.68 | 31.62 |
| HORVU5Hr1G006980.1 | Barley | cytosol | 8.74 | 31.09 |
| HORVU7Hr1G060040.1 | Barley | cytosol | 9.26 | 30.66 |
| HORVU6Hr1G092680.7 | Barley | cytosol | 13.37 | 29.74 |
| HORVU5Hr1G058640.1 | Barley | peroxisome | 8.0 | 28.68 |
| HORVU0Hr1G015160.2 | Barley | cytosol, nucleus | 26.74 | 28.04 |
| HORVU0Hr1G015190.1 | Barley | cytosol | 5.89 | 27.59 |
| HORVU6Hr1G014320.2 | Barley | cytosol | 32.53 | 27.11 |
| HORVU7Hr1G121190.1 | Barley | cytosol | 12.53 | 25.21 |
| HORVU1Hr1G089890.3 | Barley | cytosol | 14.0 | 21.77 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:HORVU6Hr1G090470 | EnsemblPlants:HORVU6Hr1G090470.10 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| UniProt:M0YB64 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF19 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | UniParc:UPI000296FC85 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:572658873..572662988
Molecular Weight (calculated)
107008.0 Da
IEP (calculated)
7.196
GRAVY (calculated)
-0.107
Length
950 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVSSSLGV LGPLLAKLTG LLADECARLK GVRREIRSLR SELTCMHAAV QKYTMLQDPD VQVKAWISLL RELAYDIEDV IDKFIYQLGN SGEHQGGFKE
101: FFRKTARRLK TLGSRRGIAK QIEDLKIRLN EVKELKCSYK LDDIVPFEHS AIDPRLSALF VEEAHLVGID GPRDDLANWM LDDENSSTKH RKVLSIVGFG
201: GLGKTTLAKE VHRKIQGHFD CHAFVSVSQK PNVKKTMKDL ISQLPCKKDF KEGIDTWDET ICIAKLKKLL QDKRYLIVID DIWSISAWNA IKNAFPENDF
301: SSRIIATTRI VDVARSCCLD GNGRMYEMEA LSDLHSKRLF FKRIFGSMDR CPDVLKQVSN KILKKCGGLP LAIISISSLL ATKPVVKDEW ERVRRSIGSA
401: LDKDRSLDGM NSILSLSYND LSPNLKTCLL YLCIYPEDYV IQRDILVRRW IAEGFISEER GQSKQEVAEN HFYELINKSM VQPVEVSYDG KARACQVHDM
501: MLELIISKSV EDNFISLAGH GQTDFVNGHG LIRRLSVQHS YQELASRLEN EDLSHVRSLT VIASTCIKHL PRLVGFEALR VLEFEDCENL HEYDMSGIDN
601: LVQLKYLSFR GTGMLKLPSG VVRLYGLETL DISNTCIEEL PTGVIQLVKL QHLLMARYSS NDSYGEMKIP SGIGNMSSLQ VILGLNIIKS SLCAVEELGN
701: LIGLKELHVQ LDGGGSQQYK RHEDMFISSL CKLSTCKLQS LQIHSSSSTP LQFLNSWYPL PYNLQIFWMT TNYFLPMMPN WIVPVLTSLA NLNINLNKVT
801: EEDLQILGEM PALLCLSITF NTVQKDRVTV QGVAFPCLKE FSLICSPLCA SAIYLTFGEG ALPTLEKLEL PFFILVAEAY GFYLGLGHLP CLRDAHVTLR
901: NDDDRYYKYN SAAAAAIRNE ANSHPNHPRL SFRGEMKKSS TDDKEGCVIS
101: FFRKTARRLK TLGSRRGIAK QIEDLKIRLN EVKELKCSYK LDDIVPFEHS AIDPRLSALF VEEAHLVGID GPRDDLANWM LDDENSSTKH RKVLSIVGFG
201: GLGKTTLAKE VHRKIQGHFD CHAFVSVSQK PNVKKTMKDL ISQLPCKKDF KEGIDTWDET ICIAKLKKLL QDKRYLIVID DIWSISAWNA IKNAFPENDF
301: SSRIIATTRI VDVARSCCLD GNGRMYEMEA LSDLHSKRLF FKRIFGSMDR CPDVLKQVSN KILKKCGGLP LAIISISSLL ATKPVVKDEW ERVRRSIGSA
401: LDKDRSLDGM NSILSLSYND LSPNLKTCLL YLCIYPEDYV IQRDILVRRW IAEGFISEER GQSKQEVAEN HFYELINKSM VQPVEVSYDG KARACQVHDM
501: MLELIISKSV EDNFISLAGH GQTDFVNGHG LIRRLSVQHS YQELASRLEN EDLSHVRSLT VIASTCIKHL PRLVGFEALR VLEFEDCENL HEYDMSGIDN
601: LVQLKYLSFR GTGMLKLPSG VVRLYGLETL DISNTCIEEL PTGVIQLVKL QHLLMARYSS NDSYGEMKIP SGIGNMSSLQ VILGLNIIKS SLCAVEELGN
701: LIGLKELHVQ LDGGGSQQYK RHEDMFISSL CKLSTCKLQS LQIHSSSSTP LQFLNSWYPL PYNLQIFWMT TNYFLPMMPN WIVPVLTSLA NLNINLNKVT
801: EEDLQILGEM PALLCLSITF NTVQKDRVTV QGVAFPCLKE FSLICSPLCA SAIYLTFGEG ALPTLEKLEL PFFILVAEAY GFYLGLGHLP CLRDAHVTLR
901: NDDDRYYKYN SAAAAAIRNE ANSHPNHPRL SFRGEMKKSS TDDKEGCVIS
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.