Factsheet for HORVU5Hr1G007040.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
iPSORT:	secretory
MultiLoc:	nucleus
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G006980.1	Barley	cytosol	30.61	97.0
HORVU5Hr1G006960.7	Barley	cytosol	94.92	95.03
HORVU1Hr1G004870.1	Barley	cytosol	12.06	91.07
TraesCS5D01G032300.1	Wheat	cytosol	80.5	80.31
TraesCS5B01G023600.1	Wheat	cytosol	80.5	79.84
HORVU6Hr1G094200.2	Barley	cytosol	42.91	43.16
HORVU6Hr1G075320.1	Barley	mitochondrion	47.4	41.95
HORVU7Hr1G096640.2	Barley	cytosol	41.84	39.64
HORVU6Hr1G094170.1	Barley	mitochondrion	44.56	39.27
HORVU6Hr1G092510.2	Barley	cytosol, plasma membrane	30.14	38.99
HORVU6Hr1G084930.1	Barley	cytosol	42.79	38.55
HORVU0Hr1G017790.1	Barley	endoplasmic reticulum, golgi	31.09	37.79
HORVU6Hr1G092500.1	Barley	mitochondrion	27.07	37.66
HORVU1Hr1G089960.1	Barley	cytosol	16.19	37.33
HORVU5Hr1G123480.1	Barley	cytosol	29.43	36.56
HORVU0Hr1G015190.1	Barley	cytosol	8.39	34.98
HORVU6Hr1G090550.1	Barley	peroxisome	29.55	33.92
HORVU7Hr1G111650.1	Barley	cytosol	5.08	32.82
HORVU7Hr1G121200.2	Barley	plastid	20.57	32.46
HORVU1Hr1G005470.2	Barley	cytosol	35.11	31.94
HORVU5Hr1G093970.1	Barley	cytosol	35.58	31.89
HORVU5Hr1G022730.3	Barley	cytosol	35.82	31.86
HORVU1Hr1G089930.4	Barley	cytosol	10.4	31.21
HORVU7Hr1G111630.6	Barley	cytosol	33.92	30.6
HORVU1Hr1G005520.1	Barley	cytosol	21.75	30.56
HORVU1Hr1G002680.2	Barley	plasma membrane	23.4	30.37
HORVU1Hr1G089990.1	Barley	cytosol	15.13	30.19
HORVU7Hr1G111610.1	Barley	cytosol	22.93	30.08
HORVU7Hr1G111700.2	Barley	cytosol, mitochondrion, plastid	33.92	30.02
KXG21363	Sorghum	cytosol	41.73	30.02
HORVU7Hr1G111620.1	Barley	cytosol, nucleus	23.17	29.92
HORVU6Hr1G090470.10	Barley	extracellular, plasma membrane	33.57	29.89
HORVU0Hr1G015160.2	Barley	cytosol, nucleus	31.91	29.8
HORVU6Hr1G014320.2	Barley	cytosol	39.72	29.47
HORVU3Hr1G107310.1	Barley	cytosol	17.61	29.22
HORVU3Hr1G112930.1	Barley	cytosol	33.69	29.17
HORVU6Hr1G092680.7	Barley	cytosol	14.66	29.04
HORVU7Hr1G110630.1	Barley	cytosol	29.91	29.01
HORVU5Hr1G125350.1	Barley	cytosol	23.52	28.72
HORVU7Hr1G060040.1	Barley	cytosol	9.69	28.57
HORVU5Hr1G058640.1	Barley	peroxisome	8.39	26.79
HORVU7Hr1G115990.1	Barley	mitochondrion	33.33	26.31
HORVU7Hr1G111710.2	Barley	cytosol	15.25	25.65
HORVU7Hr1G006150.5	Barley	plastid	15.6	23.96
HORVU7Hr1G121190.1	Barley	cytosol	12.88	23.09
HORVU1Hr1G089890.3	Barley	cytosol	12.65	17.51

Protein Annotations

EnsemblPlants:HORVU5Hr1G007040.1	EnsemblPlantsGene:HORVU5Hr1G007040	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52047	SUPFAM:SSF52540	UniParc:UPI000B4840C9	UniProt:A0A287Q971	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:+:12843990..12849181

Molecular Weight (calculated)

94991.2 Da

IEP (calculated)

5.058

GRAVY (calculated)

-0.173

Length

846 amino acids

Sequence
(BLAST)

001: MEEEGLVSAA TGALQPALAK LAALLGDEYK EVRGEVELLT RELAAMDAFL LTKSEEEEDH SSQDKACMHE IRELSYDIDD DLGGFIMASV PDKSAELAGL
101: LDKMQAMLGR TKARHQMIAT AVDDLKEQVV KVAERHSHHK RPKVDDRRAL ATIDNASSEL VGVDGPKEEL IQLLLGGSDS ESTQQQPNPS LVAIVGSGGM
201: GKTTLAKQVY KDLKQSQFNC HAAFCSVPRS SDKVQVISAI YKKLNRSYYP SPDEDLPQLV TMISDFLEDK QYFIVLDDIR DVEIWKVIEC SFPTTSSGSK
301: IIITTRIHAV AQSCCSTFRG HVYNIRPLSM VHSRQLFYAR LFNSEEKCPS YLQGISGPIL DKCAGLPLAI IAICAVLAYK ASVNGIWEQV KDSIGPALQN
401: SIVEDMVNII SLSYLDLPPH LKTCLLYLSI FPERHNIKKE NLIRRWIGEG FIQKRVGYTI YESGEMCFNE LINRRLIQAA KMDETFGDEV KSYRVHATVH
501: DFIISKAVEG NFVTIVGVHG VINPDTKAKI RRVSLQNDGK IPSGLDVSSA RSLHVFGRNV KIPSLSEFPL LHVLDFEDCS QLEDDHLAGI GNLFHLNYLR
601: FKHANAVKKL PEQVARLQHL EIDVKGYSKL MEIPMTIQER LECNVTLYVD GYETVPDEIA AIEGLRVLEG LNIYTQSTEF LKRLGQLKKL RKLGIIWNMY
701: DMGNCDVNFE KDDEEIEEDE EEFLSSICEL GKAGLESLDI FVKEAADRYF KRSWFPDPQC GLRELIIAGD YLSEVPAWVA SLVNLEKLCI SMEVINARDV
801: EILRGLPRLR HLRISVDDEE VSVPQAAVEK AMEEHPNRPT LVWFVD

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.