Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G557600.2 | Wheat | cytosol | 59.74 | 59.94 |
| HORVU6Hr1G094200.2 | Barley | cytosol | 50.91 | 56.84 |
| HORVU6Hr1G094170.1 | Barley | mitochondrion | 54.53 | 53.33 |
| HORVU6Hr1G075320.1 | Barley | mitochondrion | 54.1 | 53.14 |
| HORVU6Hr1G092510.2 | Barley | cytosol, plasma membrane | 34.82 | 50.0 |
| Os08t0372700-00 | Rice | nucleus | 48.14 | 49.73 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 48.35 | 49.4 |
| HORVU6Hr1G092500.1 | Barley | mitochondrion | 31.74 | 49.01 |
| HORVU0Hr1G017790.1 | Barley | endoplasmic reticulum, golgi | 36.32 | 48.99 |
| Zm00001d007688_P002 | Maize | cytosol | 21.73 | 48.69 |
| HORVU6Hr1G092680.7 | Barley | cytosol | 20.77 | 45.67 |
| HORVU5Hr1G006960.7 | Barley | cytosol | 38.87 | 43.2 |
| HORVU5Hr1G007040.1 | Barley | cytosol | 38.55 | 42.79 |
| HORVU5Hr1G006980.1 | Barley | cytosol | 12.03 | 42.32 |
| HORVU7Hr1G096640.2 | Barley | cytosol | 39.4 | 41.43 |
| HORVU5Hr1G123480.1 | Barley | cytosol | 30.03 | 41.41 |
| HORVU0Hr1G015190.1 | Barley | cytosol | 8.95 | 41.38 |
| HORVU0Hr1G015160.2 | Barley | cytosol, nucleus | 39.4 | 40.84 |
| HORVU7Hr1G111650.1 | Barley | cytosol | 5.64 | 40.46 |
| HORVU6Hr1G014320.2 | Barley | cytosol | 47.71 | 39.3 |
| HORVU7Hr1G111620.1 | Barley | cytosol, nucleus | 26.52 | 38.02 |
| HORVU1Hr1G089960.1 | Barley | cytosol | 14.8 | 37.87 |
| HORVU7Hr1G111630.6 | Barley | cytosol | 37.49 | 37.53 |
| HORVU6Hr1G090550.1 | Barley | peroxisome | 29.29 | 37.31 |
| HORVU7Hr1G111610.1 | Barley | cytosol | 25.56 | 37.21 |
| HORVU1Hr1G005470.2 | Barley | cytosol | 36.63 | 36.99 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 37.27 | 36.8 |
| HORVU1Hr1G005520.1 | Barley | cytosol | 23.43 | 36.54 |
| HORVU5Hr1G093970.1 | Barley | cytosol | 36.63 | 36.44 |
| HORVU7Hr1G111700.2 | Barley | cytosol, mitochondrion, plastid | 37.06 | 36.4 |
| HORVU3Hr1G107310.1 | Barley | cytosol | 19.6 | 36.08 |
| HORVU1Hr1G002680.2 | Barley | plasma membrane | 24.92 | 35.89 |
| HORVU6Hr1G090470.10 | Barley | extracellular, plasma membrane | 35.46 | 35.05 |
| HORVU5Hr1G125350.1 | Barley | cytosol | 25.77 | 34.92 |
| KXG21363 | Sorghum | cytosol | 43.66 | 34.86 |
| HORVU7Hr1G111710.2 | Barley | cytosol | 18.64 | 34.79 |
| HORVU3Hr1G112930.1 | Barley | cytosol | 35.36 | 33.98 |
| HORVU1Hr1G004870.1 | Barley | cytosol | 4.05 | 33.93 |
| HORVU1Hr1G089930.4 | Barley | cytosol | 10.12 | 33.69 |
| HORVU7Hr1G121200.2 | Barley | plastid | 19.17 | 33.58 |
| HORVU1Hr1G089990.1 | Barley | cytosol | 15.12 | 33.49 |
| HORVU7Hr1G110630.1 | Barley | cytosol | 29.5 | 31.77 |
| HORVU7Hr1G115990.1 | Barley | mitochondrion | 34.93 | 30.6 |
| HORVU7Hr1G060040.1 | Barley | cytosol | 9.05 | 29.62 |
| HORVU5Hr1G058640.1 | Barley | peroxisome | 8.2 | 29.06 |
| HORVU7Hr1G121190.1 | Barley | cytosol | 14.27 | 28.39 |
| HORVU7Hr1G006150.5 | Barley | plastid | 15.34 | 26.13 |
| HORVU1Hr1G089890.3 | Barley | cytosol | 14.38 | 22.09 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EMBL:AK373939 | UniProt:F2ECR4 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:HORVU6Hr1G084930 | EnsemblPlants:HORVU6Hr1G084930.1 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF9 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000200868B | SEG:seg |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2ECR4]
Coordinates
chrchr6H:-:557293554..557298244
Molecular Weight (calculated)
106161.0 Da
IEP (calculated)
8.904
GRAVY (calculated)
-0.110
Length
939 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVLVSAAT GALKPVLEKL ATLVGDKYKR FKHVHREVSL LRDELATMHA FLLEMLEEES PNERDKLWMK EVRELSYDME DCVDDFIQDI ESDGFIEEMK
101: NWLGMMMARG RTASEIHGLK KQVIELSKRN GRYKTEVRQS NASHKVKEDF SQTMNKGTLH ARALVRLNST PVAIDKPKAE IIKLLTEVDG CGSPEQLKIV
201: SIVGSGGMGK TTLANQVYQE LKVGFQCLAF LSVSRSPNMM NILRRILSQV SRQPYANTIE GSEEDLVLKI NEFLQDKRYF IVVDDIWSVD TWDIIKRVFP
301: KTSIGSRIIT TTRINAVAKS CRSSFNGHIH DIGPLDIEHS RQVFCRIVFG PKEHCPSHLE EVLNQILKKC DGLPLAIIAI SGLLANKEST VSKWNEVKDS
401: IGRALERNNS VENMMKILSL SYFDLPSDLK TCLLYLSIFP EDTIIEKKNL IRRWIAEGII HKDSRYTIHE VGEMYFNELV NRCLVQPVKD RYDHKVTRCR
501: VHDVILDFIV SKSIEDNFIT LVGVPCVPIN DKMKVRRLSL QNGGEGNSTL PKHLVLSHAR SLSVFGNTDG IPPLNVFIHL RILDFGGIKQ LKEHYLTNIG
601: MLLHLRYINL RGTGVSKLPK GIRHLRYLEM LDLRSTEVGE LPASLLNLRK LVYLLTDGAV KFPDGIMKLE ALEVLKRVRV FSQTSNFLQE LGQLKNLRKL
701: FITLQDDSST RRETEEINEL YKVTASSLRS LVSLNLRSLK IMSGGSFLQQ EPLCPAMLNL QKLILIRSPV QQVPEWMLLL VNLQELRIEV EGIRQKDLCI
801: LGSLPALLIL EVEARGCSKD AKLTVGGEVG FPCLLKFLYY IAGEGMNLMF TTGSMPMLEM LKIYFEPDET KALATGAFEF GLGNLPRLAT VEVGGLTRAS
901: RVVQAAAKAC LERAVRAHPN RPALLNDTLR AHPARRFRP
101: NWLGMMMARG RTASEIHGLK KQVIELSKRN GRYKTEVRQS NASHKVKEDF SQTMNKGTLH ARALVRLNST PVAIDKPKAE IIKLLTEVDG CGSPEQLKIV
201: SIVGSGGMGK TTLANQVYQE LKVGFQCLAF LSVSRSPNMM NILRRILSQV SRQPYANTIE GSEEDLVLKI NEFLQDKRYF IVVDDIWSVD TWDIIKRVFP
301: KTSIGSRIIT TTRINAVAKS CRSSFNGHIH DIGPLDIEHS RQVFCRIVFG PKEHCPSHLE EVLNQILKKC DGLPLAIIAI SGLLANKEST VSKWNEVKDS
401: IGRALERNNS VENMMKILSL SYFDLPSDLK TCLLYLSIFP EDTIIEKKNL IRRWIAEGII HKDSRYTIHE VGEMYFNELV NRCLVQPVKD RYDHKVTRCR
501: VHDVILDFIV SKSIEDNFIT LVGVPCVPIN DKMKVRRLSL QNGGEGNSTL PKHLVLSHAR SLSVFGNTDG IPPLNVFIHL RILDFGGIKQ LKEHYLTNIG
601: MLLHLRYINL RGTGVSKLPK GIRHLRYLEM LDLRSTEVGE LPASLLNLRK LVYLLTDGAV KFPDGIMKLE ALEVLKRVRV FSQTSNFLQE LGQLKNLRKL
701: FITLQDDSST RRETEEINEL YKVTASSLRS LVSLNLRSLK IMSGGSFLQQ EPLCPAMLNL QKLILIRSPV QQVPEWMLLL VNLQELRIEV EGIRQKDLCI
801: LGSLPALLIL EVEARGCSKD AKLTVGGEVG FPCLLKFLYY IAGEGMNLMF TTGSMPMLEM LKIYFEPDET KALATGAFEF GLGNLPRLAT VEVGGLTRAS
901: RVVQAAAKAC LERAVRAHPN RPALLNDTLR AHPARRFRP
001: MAEGFVSFGL EKLWDLLSRE SERLQGIDEQ LDGLKRQLRS LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKKHVRRLAR
101: FLTDRHKVAS DIEGITKRIS DVIGEMQSFG IQQIIDGVRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVEELVGHLV ENDIYQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTLK HVWQRILQEL QPHDGNILQM DESALQPKLF QLLETGRYLL VLDDVWKKED WDRIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVSDNI GSQIVGGSCL
401: DDNSLNSVNR ILSLSYEDLP THLKHRFLYL AHFPEDSKIY TQDLFNYWAA EGIYDGSTIQ DSGEYYLEEL VRRNLVIADN RYLSLEFNFC QMHDMMREVC
501: LSKAKEENFL QIIKDPTSTS TINAQSPSRS RRFSIHSGKA FHILGHRNNP KVRSLIVSRF EEDFWIRSAS VFHNLTLLRV LDLSRVKFEG GKLPSSIGGL
601: IHLRYLSLYG AVVSHLPSTM RNLKLLLFLN LRVDNKEPIH VPNVLKEMLE LRYLSLPQEM DDKTKLELGD LVNLEYLWYF STQHSSVTDL LRMTKLRNLG
701: VSLSERCNFE TLSSSLRELR NLEMLNVLFS PEIVMVDHMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLAHIHLVHC VMKEDPMPIL EKLLHLKSVA
801: LSYGAFIGRR VVCSKGGFPQ LCALGISGES ELEEWIVEEG SMPCLRTLTI HDCEKLKELP DGLKYITSLK ELKIREMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDL
101: FLTDRHKVAS DIEGITKRIS DVIGEMQSFG IQQIIDGVRS LSLQERQRVQ REIRQTYPDS SESDLVGVEQ SVEELVGHLV ENDIYQVVSI AGMGGIGKTT
201: LARQVFHHDL VRRHFDGFAW VCVSQQFTLK HVWQRILQEL QPHDGNILQM DESALQPKLF QLLETGRYLL VLDDVWKKED WDRIKAVFPR KRGWKMLLTS
301: RNEGVGIHAD PTCLTFRASI LNPEESWKLC ERIVFPRRDE TEVRLDEEME AMGKEMVTHC GGLPLAVKAL GGLLANKHTV PEWKRVSDNI GSQIVGGSCL
401: DDNSLNSVNR ILSLSYEDLP THLKHRFLYL AHFPEDSKIY TQDLFNYWAA EGIYDGSTIQ DSGEYYLEEL VRRNLVIADN RYLSLEFNFC QMHDMMREVC
501: LSKAKEENFL QIIKDPTSTS TINAQSPSRS RRFSIHSGKA FHILGHRNNP KVRSLIVSRF EEDFWIRSAS VFHNLTLLRV LDLSRVKFEG GKLPSSIGGL
601: IHLRYLSLYG AVVSHLPSTM RNLKLLLFLN LRVDNKEPIH VPNVLKEMLE LRYLSLPQEM DDKTKLELGD LVNLEYLWYF STQHSSVTDL LRMTKLRNLG
701: VSLSERCNFE TLSSSLRELR NLEMLNVLFS PEIVMVDHMG EFVLDHFIHL KQLGLAVRMS KIPDQHQFPP HLAHIHLVHC VMKEDPMPIL EKLLHLKSVA
801: LSYGAFIGRR VVCSKGGFPQ LCALGISGES ELEEWIVEEG SMPCLRTLTI HDCEKLKELP DGLKYITSLK ELKIREMKRE WKEKLVPGGE DYYKVQHIPD
901: VQFINCDL
Arabidopsis Description
RPP8L4Probable disease resistance RPP8-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.