Factsheet for HORVU1Hr1G005520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G005470.2	Barley	cytosol	95.18	61.61
TraesCS1B01G046000.1	Wheat	cytosol	77.57	52.77
TraesCS1B01G045900.1	Wheat	cytosol	79.4	51.29
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	77.91	50.65
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	80.56	50.36
TraesCS1B01G045800.1	Wheat	cytosol	77.41	50.32
TraesCS1B01G046500.1	Wheat	endoplasmic reticulum	67.28	47.15
HORVU3Hr1G107310.1	Barley	cytosol	34.05	40.2
HORVU1Hr1G089960.1	Barley	cytosol	24.42	40.05
HORVU6Hr1G092500.1	Barley	mitochondrion	36.88	36.51
HORVU6Hr1G090470.10	Barley	extracellular, plasma membrane	56.64	35.89
Os10t0133000-00	Rice	cytosol	9.97	35.09
HORVU6Hr1G090550.1	Barley	peroxisome	42.52	34.74
HORVU5Hr1G123480.1	Barley	cytosol	38.87	34.36
HORVU1Hr1G089990.1	Barley	cytosol	23.92	33.96
HORVU6Hr1G092510.2	Barley	cytosol, plasma membrane	36.71	33.79
HORVU7Hr1G111620.1	Barley	cytosol, nucleus	36.71	33.74
HORVU7Hr1G111610.1	Barley	cytosol	36.05	33.64
HORVU7Hr1G111710.2	Barley	cytosol	27.57	33.0
HORVU7Hr1G060040.1	Barley	cytosol	15.61	32.75
HORVU5Hr1G058640.1	Barley	peroxisome	14.12	32.08
HORVU6Hr1G092680.7	Barley	cytosol	22.43	31.62
HORVU0Hr1G017790.1	Barley	endoplasmic reticulum, golgi	36.38	31.47
HORVU5Hr1G125350.1	Barley	cytosol	36.05	31.31
HORVU1Hr1G002680.2	Barley	plasma membrane	33.06	30.52
HORVU1Hr1G004870.1	Barley	cytosol	5.48	29.46
HORVU5Hr1G022730.3	Barley	cytosol	42.52	26.92
HORVU7Hr1G121190.1	Barley	cytosol	20.6	26.27
HORVU5Hr1G093970.1	Barley	cytosol	39.87	25.42
HORVU6Hr1G075320.1	Barley	mitochondrion	38.7	24.37
HORVU6Hr1G094170.1	Barley	mitochondrion	38.37	24.06
HORVU6Hr1G084930.1	Barley	cytosol	36.54	23.43
HORVU6Hr1G094200.2	Barley	cytosol	32.39	23.19
HORVU7Hr1G111630.6	Barley	cytosol	35.88	23.03
HORVU7Hr1G111700.2	Barley	cytosol, mitochondrion, plastid	36.05	22.7
HORVU7Hr1G115990.1	Barley	mitochondrion	40.37	22.67
HORVU3Hr1G112930.1	Barley	cytosol	36.71	22.62
HORVU0Hr1G015160.2	Barley	cytosol, nucleus	33.72	22.41
HORVU5Hr1G007040.1	Barley	cytosol	30.56	21.75
HORVU5Hr1G006960.7	Barley	cytosol	30.4	21.66
HORVU7Hr1G096640.2	Barley	cytosol	31.89	21.5
HORVU1Hr1G089890.3	Barley	cytosol	21.59	21.28
HORVU7Hr1G110630.1	Barley	cytosol	29.57	20.41
HORVU6Hr1G014320.2	Barley	cytosol	33.72	17.81
HORVU7Hr1G121200.2	Barley	plastid	13.95	15.67
HORVU7Hr1G006150.5	Barley	plastid	6.64	7.26
HORVU1Hr1G089930.4	Barley	cytosol	0.5	1.06
Os10t0132700-01	Rice	cytosol	0.0	0.0
HORVU7Hr1G111650.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G006980.1	Barley	cytosol	0.0	0.0
HORVU0Hr1G015190.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G005520.1	EnsemblPlantsGene:HORVU1Hr1G005520	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PANTHER:PTHR43889
PANTHER:PTHR43889:SF38	PFAM:PF00931	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000B479021	UniProt:A0A287EJ13
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:12065695..12077935

Molecular Weight (calculated)

68056.4 Da

IEP (calculated)

9.019

GRAVY (calculated)

-0.051

Length

602 amino acids

Sequence
(BLAST)

001: MKPLSDPHSE RLFFRRIFGS ENCCPHMFIE VSKAILKKCG GLPLAIISIS GLLANRPRVK EEWEKVKRSI GSDLNKSRSL EGMKNILSLS YNDLPPHLKT
101: VLLHLSNFPE DYVIGRERLV RQWIAEGFIT EERGRSCQEV AESYFYELIN KSLVQPVDIL YDGKVQACRV HDMMLELIIS KSIEENFITV VNSSQTAWGN
201: SQCSIRRLSI QDINQELASE LAKKDLSHVR SLLITSPGCI KHLPSLTKFE TLRVLDFEDC KGLTEYDMNG IENLFQLKYL SFRRTDISEV KSGIVMLHDL
301: VTLDLRSTKI RDLPARIILL TKLQHLLTEN VFWVHDVVIP VGIENMANLT EISGFDITTS SVGAVKELGS LINLKVLRVN YTVKGAKSQE YKSHAEMFHS
401: SLCKLGSYKL HSLWINGGNC SLFELIDSWS PLPSCLQRFE MGTKYCLSKL PKWVTPALTS LANLDINISV ITKEVLDILG ELPALLSLKL CTNTVHKHRL
501: DLPGRGFRCL KQFFYSPFGG PGTLRLNKGA LPKLEKLKLW ISVLGSTGYS WYNLGIKHLP CLKDVHVILL KQNAISSDVE AAKVSIRKEA NLHPNRPRLL
601: FT

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.