Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G464900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 77.29 | 80.39 |
| TraesCS6A01G414400.1 | Wheat | cytosol | 75.94 | 79.5 |
| TraesCS6A01G414000.1 | Wheat | cytosol | 77.29 | 78.94 |
| TraesCS6B01G463600.1 | Wheat | cytosol | 69.17 | 78.49 |
| HORVU6Hr1G094200.2 | Barley | cytosol | 68.02 | 77.65 |
| TraesCSU01G235500.1 | Wheat | cytosol | 31.46 | 75.88 |
| HORVU0Hr1G017790.1 | Barley | endoplasmic reticulum, golgi | 44.9 | 61.93 |
| HORVU6Hr1G075320.1 | Barley | mitochondrion | 56.56 | 56.8 |
| Os08t0372700-00 | Rice | nucleus | 52.81 | 55.78 |
| HORVU6Hr1G084930.1 | Barley | cytosol | 53.33 | 54.53 |
| Zm00001d007688_P002 | Maize | cytosol | 23.65 | 54.18 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 51.67 | 53.97 |
| HORVU6Hr1G092510.2 | Barley | cytosol, plasma membrane | 36.15 | 53.06 |
| HORVU0Hr1G015190.1 | Barley | cytosol | 11.15 | 52.71 |
| HORVU6Hr1G092500.1 | Barley | mitochondrion | 33.33 | 52.63 |
| HORVU5Hr1G006980.1 | Barley | cytosol | 13.33 | 47.94 |
| HORVU6Hr1G092680.7 | Barley | cytosol | 20.52 | 46.14 |
| HORVU5Hr1G123480.1 | Barley | cytosol | 31.88 | 44.93 |
| HORVU5Hr1G006960.7 | Barley | cytosol | 39.48 | 44.85 |
| HORVU5Hr1G007040.1 | Barley | cytosol | 39.27 | 44.56 |
| HORVU7Hr1G111650.1 | Barley | cytosol | 5.94 | 43.51 |
| HORVU7Hr1G096640.2 | Barley | cytosol | 39.9 | 42.89 |
| HORVU6Hr1G014320.2 | Barley | cytosol | 50.0 | 42.11 |
| HORVU1Hr1G089960.1 | Barley | cytosol | 16.04 | 41.96 |
| HORVU0Hr1G015160.2 | Barley | cytosol, nucleus | 39.38 | 41.72 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 40.83 | 41.22 |
| HORVU6Hr1G090550.1 | Barley | peroxisome | 31.25 | 40.71 |
| HORVU1Hr1G005470.2 | Barley | cytosol | 38.75 | 40.0 |
| HORVU1Hr1G089930.4 | Barley | cytosol | 11.56 | 39.36 |
| HORVU5Hr1G093970.1 | Barley | cytosol | 38.54 | 39.19 |
| HORVU1Hr1G089990.1 | Barley | cytosol | 16.98 | 38.44 |
| HORVU3Hr1G107310.1 | Barley | cytosol | 20.42 | 38.43 |
| HORVU1Hr1G004870.1 | Barley | cytosol | 4.48 | 38.39 |
| HORVU1Hr1G005520.1 | Barley | cytosol | 24.06 | 38.37 |
| HORVU7Hr1G111630.6 | Barley | cytosol | 36.77 | 37.63 |
| KXG21363 | Sorghum | cytosol | 46.04 | 37.59 |
| HORVU7Hr1G111610.1 | Barley | cytosol | 25.1 | 37.36 |
| HORVU7Hr1G111700.2 | Barley | cytosol, mitochondrion, plastid | 37.19 | 37.34 |
| HORVU6Hr1G090470.10 | Barley | extracellular, plasma membrane | 36.35 | 36.74 |
| HORVU7Hr1G060040.1 | Barley | cytosol | 10.94 | 36.59 |
| HORVU7Hr1G121200.2 | Barley | plastid | 20.42 | 36.57 |
| HORVU7Hr1G111620.1 | Barley | cytosol, nucleus | 24.69 | 36.18 |
| HORVU3Hr1G112930.1 | Barley | cytosol | 36.77 | 36.13 |
| HORVU1Hr1G002680.2 | Barley | plasma membrane | 24.38 | 35.89 |
| HORVU5Hr1G058640.1 | Barley | peroxisome | 9.58 | 34.72 |
| HORVU5Hr1G125350.1 | Barley | cytosol | 24.38 | 33.77 |
| HORVU7Hr1G115990.1 | Barley | mitochondrion | 37.5 | 33.58 |
| HORVU7Hr1G111710.2 | Barley | cytosol | 17.29 | 33.0 |
| HORVU7Hr1G110630.1 | Barley | cytosol | 29.27 | 32.22 |
| HORVU7Hr1G006150.5 | Barley | plastid | 17.29 | 30.13 |
| HORVU7Hr1G121190.1 | Barley | cytosol | 13.85 | 28.18 |
| HORVU1Hr1G089890.3 | Barley | cytosol | 15.52 | 24.39 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287V957 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:HORVU6Hr1G094170 | EnsemblPlants:HORVU6Hr1G094170.1 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 |
| PANTHER:PTHR43889:SF9 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI000B47B7E4 | SEG:seg |
Description
No Description!
Coordinates
chrchr6H:-:580614638..580659945
Molecular Weight (calculated)
108105.0 Da
IEP (calculated)
7.516
GRAVY (calculated)
-0.095
Length
960 amino acids
Sequence
(BLAST)
(BLAST)
001: RCFTGLGLTC RRSLIGVHIP PHKINRASTS CKPMEAALVS VATGVLKPVL EKLAALLGDK YKRFKGVRKE NKSLTHELAA MEAFLLKMSE DEDPDEQDKV
101: WMNEVRELSY DLEDAIDDFM QSIGDNDEKS DGFTERIKSS LGKLGKMKAR HRIGKEIQDL KKQIKEVGER NARYKSRHEA FSKTVNATVD PRALAIFEHA
201: PKLVGIDEPK AEIIKLLTEE DVRASEQEQQ QPKIVSIVGS GGMGKTTLAN QVYQELKGQY ECRAFVSVSR NPDIINILRT ILSEVARKDY GGTQVGSAQQ
301: LISKITDFLE DKRYFVVVDD IWNEDTWDII KCAFPAARST SKIITTTRIN NVAHSCCSSF NGRIYNIRAL DIVHSRQLFH RRLFKSDEDC PSYLEKVSGQ
401: ILKKCDGLPL AIIAISGLLA NSERTEDLWN QVKDSIGRAL ERNPNVEGMM KILSLSYFDL PLYLKTCLLY LSVYLEDSTI EKKGLIRRWI AEGFIHTEGR
501: YTTYEVGERY FNELLNRGLI QPGIIDIYGE VVSCRVHDTI LDFIISKSIE ENFVTLLGVP ILTIGKQRKV VRRLCVQGVE EGNSAVLIAD LVFSHVRSLA
601: MVRGLLEIPS LEEFRHLRVL DLKDCSELED HHLENIVRLF QLRYLNLKGT QISKLPEQIG RLGCLEMLDL RDTCVRGLPA SIVNLRKLSH LLVHNDIKYP
701: HGIAKMQALE TLQFVTVSIQ PVDILCGLGQ LMNLRNLGLT LDFIFGSDAK NTNMVGEEHK KAIVSSLCKL GTQNLRFLNI EFGRSLLHVE SLCLPTLEQL
801: SIRFSDFPHV PTWVASLRNL QWLRLGLKVV KQDDLCVLGA LPSLLILHLH EETESNEKLR ISGEVGFRFL KIFIYCKGFG PVDLMFGTGS MPKLEKLEIH
901: VLCIVEANSV GFGIENLPCL TSVKCLALEG DDGIVQVVKS VMERAASTHP NHPSLLFGRI
101: WMNEVRELSY DLEDAIDDFM QSIGDNDEKS DGFTERIKSS LGKLGKMKAR HRIGKEIQDL KKQIKEVGER NARYKSRHEA FSKTVNATVD PRALAIFEHA
201: PKLVGIDEPK AEIIKLLTEE DVRASEQEQQ QPKIVSIVGS GGMGKTTLAN QVYQELKGQY ECRAFVSVSR NPDIINILRT ILSEVARKDY GGTQVGSAQQ
301: LISKITDFLE DKRYFVVVDD IWNEDTWDII KCAFPAARST SKIITTTRIN NVAHSCCSSF NGRIYNIRAL DIVHSRQLFH RRLFKSDEDC PSYLEKVSGQ
401: ILKKCDGLPL AIIAISGLLA NSERTEDLWN QVKDSIGRAL ERNPNVEGMM KILSLSYFDL PLYLKTCLLY LSVYLEDSTI EKKGLIRRWI AEGFIHTEGR
501: YTTYEVGERY FNELLNRGLI QPGIIDIYGE VVSCRVHDTI LDFIISKSIE ENFVTLLGVP ILTIGKQRKV VRRLCVQGVE EGNSAVLIAD LVFSHVRSLA
601: MVRGLLEIPS LEEFRHLRVL DLKDCSELED HHLENIVRLF QLRYLNLKGT QISKLPEQIG RLGCLEMLDL RDTCVRGLPA SIVNLRKLSH LLVHNDIKYP
701: HGIAKMQALE TLQFVTVSIQ PVDILCGLGQ LMNLRNLGLT LDFIFGSDAK NTNMVGEEHK KAIVSSLCKL GTQNLRFLNI EFGRSLLHVE SLCLPTLEQL
801: SIRFSDFPHV PTWVASLRNL QWLRLGLKVV KQDDLCVLGA LPSLLILHLH EETESNEKLR ISGEVGFRFL KIFIYCKGFG PVDLMFGTGS MPKLEKLEIH
901: VLCIVEANSV GFGIENLPCL TSVKCLALEG DDGIVQVVKS VMERAASTHP NHPSLLFGRI
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.