Factsheet for TraesCS6A01G414000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G414400.1	Wheat	cytosol	82.13	84.19
TraesCS6B01G463600.1	Wheat	cytosol	73.72	81.91
TraesCSU01G235500.1	Wheat	cytosol	33.4	78.89
HORVU6Hr1G094170.1	Barley	mitochondrion	78.94	77.29
TraesCS6A01G414200.1	Wheat	cytosol	43.62	74.68
TraesCS4A01G389600.1	Wheat	cytosol	49.36	70.95
TraesCS6A01G414300.1	Wheat	cytosol	63.09	64.74
TraesCS6A01G403400.1	Wheat	cytosol	59.68	59.94
TraesCS6A01G403300.1	Wheat	cytosol	57.45	57.94
TraesCS4A01G389700.1	Wheat	cytosol	15.74	56.27
Zm00001d007688_P002	Maize	cytosol	24.26	54.42
Os08t0372700-00	Rice	nucleus	52.23	54.02
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	52.13	53.32
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	54.57	49.66
TraesCS6A01G414100.1	Wheat	cytosol	17.34	43.01
TraesCS5A01G087400.1	Wheat	cytosol	36.91	42.63
TraesCS7A01G416600.1	Wheat	cytosol	39.79	41.88
TraesCS4A01G327300.1	Wheat	cytosol	33.4	40.41
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	39.57	40.17
TraesCS4A01G314300.1	Wheat	cytosol	16.17	40.11
TraesCS7A01G419800.1	Wheat	cytosol, endoplasmic reticulum	39.26	40.02
TraesCS7A01G553700.1	Wheat	cytosol	21.06	39.6
TraesCS1A01G409400.1	Wheat	extracellular	8.94	39.25
TraesCS4A01G314400.1	Wheat	cytosol	38.83	39.08
TraesCS5A01G380700.1	Wheat	cytosol, nucleus, peroxisome	39.15	39.07
TraesCS5A01G073300.1	Wheat	cytosol	31.28	38.23
TraesCS7A01G499600.1	Wheat	cytosol	38.09	37.64
TraesCS6A01G389000.1	Wheat	peroxisome	37.66	37.42
TraesCS1A01G003100.1	Wheat	cytosol	31.28	37.4
KXG21363	Sorghum	cytosol	46.49	37.16
TraesCS1A01G409300.1	Wheat	cytosol	11.6	36.95
TraesCS1A01G322200.1	Wheat	cytosol, nucleus, peroxisome	22.98	35.35
TraesCS7A01G553600.1	Wheat	nucleus	32.45	35.1
TraesCS5A01G087600.1	Wheat	cytosol	16.6	33.05
TraesCS1A01G409200.1	Wheat	cytosol	17.77	32.36

Protein Annotations

EnsemblPlants:TraesCS6A01G414000.1	EnsemblPlantsGene:TraesCS6A01G414000	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:-:614673412..614678395

Molecular Weight (calculated)

106119.0 Da

IEP (calculated)

6.260

GRAVY (calculated)

-0.082

Length

940 amino acids

Sequence
(BLAST)

001: MAMEAALVSV ATGVLKPVIG KLTVLLGNEY KRFKTVRKEI KSLTNELAAM EAFLLKMSEE EDPDLQDKVW MNEVRELSYD MEDAIDDFMQ SIGDKDEKPD
101: GFIEKIKNTL GNLGKMKARR RIGKEIQDLK KQIKEVGERN ARYKGRETFS KTVNATVDPR ALAIFEHASK LVGIDKPKAE IIKLLTEEDV RASEQQQQQQ
201: PKIVSIVGSG GMGKTTLANQ VYQEIKGQFE CWAFLSVSRS PDMMNILRTI LSEVSGQGYS NTEAGSVPIL ISKINDFLLD KRYFVVVDDI WDVDTWDIIK
301: CAFPATSSTS RIITTTRINN VAHSCCSSFN GCVYNIRALD MVHSRQLFYR RLFRSDEDCP SYLQEISEQI LEKCHGLPLA IIAISGLLAN TEKTEVLWNQ
401: VKDSIGRALE RNPSVEGMMK ILSLSYFDLP PYLKTCLLYL SMYLEDSTIE KEDLIRRWVA EGFIHREGRY TAYEFGEKCF NELLNRGLIQ PGESDIYREV
501: KSCRVHDTIL DFVISKSIEE NFVTILGVPT LTIRNQSKVV RRLCVQGVEK GNSAVLIEDL VFSHVRSLTM VRGLLEIPSL EEFRHLHVLD LMGCFEWEDH
601: HLENIVRLFQ LRYLNLQGTR ISKLPEQIGR LGCLEILDLR RTHVRELPAS VVNLRKLMHL LVEGLVKFPD GIAKMQALET LKDVNASIQP LDFLCGLGQL
701: MNLRNLRIHL DFEVDPDTEG RNMVGEEHEK ALVSSLCKLG TQNLGSLTIY GWGNLLHEES LCLPTLKDLT ISDLPASWQV STCMGSLRNL QRLCLSVEVL
801: KQGDLCTLGA LPSLLVLYLV GKTESNGKLR ITGEVGFRFL KIFIYAGCCK PVDLMFGTGS MPKLEKLEFN YICLVEANSL GFGIENLPCL TSVKCITVWG
901: DDGIVEAVKT AMERAASAHL NHPSLLFQRF RPCYSCDISL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.