Factsheet for TraesCS6A01G414200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G389600.1	Wheat	cytosol	71.22	59.79
TraesCS6A01G414400.1	Wheat	cytosol	74.13	44.38
TraesCS6A01G414000.1	Wheat	cytosol	74.68	43.62
TraesCS6A01G414300.1	Wheat	cytosol	71.04	42.58
TraesCS6A01G403400.1	Wheat	cytosol	71.04	41.67
TraesCS6A01G403300.1	Wheat	cytosol	68.49	40.34
TraesCS7B01G478300.1	Wheat	cytosol	35.88	39.4
TraesCS7A01G553700.1	Wheat	cytosol	35.88	39.4
TraesCS7D01G540600.1	Wheat	cytosol	35.52	39.0
TraesCS4A01G314300.1	Wheat	cytosol	26.78	38.79
TraesCS1A01G409400.1	Wheat	extracellular	14.94	38.32
HORVU7Hr1G121200.2	Barley	plastid	34.61	35.45
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	64.3	34.17
TraesCS5A01G087400.1	Wheat	cytosol	46.45	31.33
TraesCS4A01G327300.1	Wheat	cytosol	42.44	29.99
TraesCS1A01G003100.1	Wheat	cytosol	41.35	28.88
TraesCS7A01G416600.1	Wheat	cytosol	45.36	27.88
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	44.26	26.24
TraesCS4A01G314400.1	Wheat	cytosol	43.72	25.7
TraesCS7A01G419800.1	Wheat	cytosol, endoplasmic reticulum	42.99	25.6
Os11t0265900-02	Rice	cytosol	42.81	25.43
TraesCS7A01G499600.1	Wheat	cytosol	43.9	25.34
TraesCS5A01G380700.1	Wheat	cytosol, nucleus, peroxisome	42.44	24.73
TraesCS6A01G389000.1	Wheat	peroxisome	41.53	24.1
TraesCS1A01G409300.1	Wheat	cytosol	12.93	24.07
TraesCS5A01G073300.1	Wheat	cytosol	32.06	22.89
TraesCS7A01G553600.1	Wheat	nucleus	34.61	21.86
TraesCS1A01G322200.1	Wheat	cytosol, nucleus, peroxisome	17.49	15.71
TraesCS1A01G409200.1	Wheat	cytosol	11.11	11.82
TraesCS5A01G087600.1	Wheat	cytosol	5.65	6.57
HORVU7Hr1G121190.1	Barley	cytosol	4.55	5.3
TraesCS6A01G414100.1	Wheat	cytosol	0.55	0.79
TraesCS4A01G389700.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G414200.1	EnsemblPlantsGene:TraesCS6A01G414200	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9
PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1

Description

No Description!

Coordinates

chr6A:-:614691169..614697825

Molecular Weight (calculated)

61775.1 Da

IEP (calculated)

8.154

GRAVY (calculated)

-0.173

Length

549 amino acids

Sequence
(BLAST)

001: MEAALVTVAT GVLKPVLRKL ATLLGDEYKR FKGVRKEIGS LTHELAAMEA FLLKMSEEEE DPDVQGKVWM TEVRELSYDL EDAIDDFMQS VGDKDEKPDG
101: FIEKIKSSLG KLGKMKARHQ IGKEIQDLKK QIIEVGDRNA RYKGRETFSN TKNATVDPRA LAVFEHASKL VGIDEPRAEL IKLLTDDDGV ASTQQHVKMV
201: SIVGSGGMGK TTLANQVYQE LKEKFKCKAF ISVSRNPDMT NILRTILSEV SGQAYASTKA GTIQQLIGKI TNVLAHKRYF VVVDDIWAVD TWDVIKCAFP
301: ITCSGSIIIT TTRKSDVADL CRSSCSGCIY NMRALDVVHS RQLFHRRLFD SNEDCPPNLQ KVLDEILKKC GGLPLVIIGI SGLLAITERT EHMWNQVKDS
401: IGRALERNPG VEAMIKILSL SYFDLPPHLK TCLLYLSIFP EDSVIEKRAL IWRWVAEGFI HKDGRYTTYE SGERCFNELL NRSLIQVACT NEYGKVESCR
501: VHDIILDFII SKSIEVNFVT LIGVPYITSR TQSKVRRLSL SKLMRKEIQ

Best Arabidopsis Sequence Match ( AT3G46530.1 )
(BLAST)

001: MVDAITEFVV GKIGNYLIEE ASMFMAVKED LEELKTELTC IHGYLKDVEA REREDEVSKE WSKLVLDFAY DVEDVLDTYH LKLEERSQRR GLRRLTNKIG
101: RKMDAYSIVD DIRILKRRIL DITRKRETYG IGGLKEPQGG GNTSSLRVRQ LRRARSVDQE EVVVGLEDDA KILLEKLLDY EEKNRFIISI FGMGGLGKTA
201: LARKLYNSRD VKERFEYRAW TYVSQEYKTG DILMRIIRSL GMTSGEELEK IRKFAEEELE VYLYGLLEGK KYLVVVDDIW EREAWDSLKR ALPCNHEGSR
301: VIITTRIKAV AEGVDGRFYA HKLRFLTFEE SWELFEQRAF RNIQRKDEDL LKTGKEMVQK CRGLPLCIVV LAGLLSRKTP SEWNDVCNSL WRRLKDDSIH
401: VAPIVFDLSF KELRHESKLC FLYLSIFPED YEIDLEKLIH LLVAEGFIQG DEEMMMEDVA RYYIEELIDR SLLEAVRRER GKVMSCRIHD LLRDVAIKKS
501: KELNFVNVYN DHVAQHSSTT CRREVVHHQF KRYSSEKRKN KRMRSFLYFG EFDHLVGLDF ETLKLLRVLD FGSLWLPFKI NGDLIHLRYL GIDGNSINDF
601: DIAAIISKLR FLQTLFVSDN YFIEETIDLR KLTSLRHVIG NFFGGLLIGD VANLQTLTSI SFDSWNKLKP ELLINLRDLG ISEMSRSKER RVHVSWASLT
701: KLESLRVLKL ATPTEVHLSL ESEEAVRSMD VISRSLESVT LVGITFEEDP MPFLQKMPRL EDLILLSCNY SGKMSVSEQG FGRLRKLDLL MRSLDELQIE
801: EEAMPNLIEL EISVSKRETK LIIPNRLRAF GQIYC

Arabidopsis Description

RPP13Disease resistance protein RPP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M667]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.