Factsheet for TraesCS4A01G389600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G414200.1	Wheat	cytosol	59.79	71.22
TraesCS7D01G086700.2	Wheat	cytosol	93.43	65.63
TraesCS6B01G464500.1	Wheat	cytosol	64.68	65.48
Zm00001d007688_P002	Maize	cytosol	33.95	52.98
TraesCS6A01G414400.1	Wheat	cytosol	71.87	51.25
TraesCS6A01G414300.1	Wheat	cytosol	69.88	49.89
TraesCS6A01G414000.1	Wheat	cytosol	70.95	49.36
TraesCS6B01G464200.1	Wheat	cytosol	70.03	48.57
TraesCS6A01G403400.1	Wheat	cytosol	68.65	47.97
TraesCS6A01G403300.1	Wheat	cytosol	66.06	46.35
TraesCS6B01G463700.1	Wheat	cytosol	41.28	43.13
Os08t0372700-00	Rice	nucleus	59.63	42.9
HORVU0Hr1G017790.1	Barley	endoplasmic reticulum, golgi	45.11	42.39
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	59.33	42.22
TraesCS1A01G409400.1	Wheat	extracellular	12.84	39.25
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	61.93	39.21
TraesCSU01G196800.1	Wheat	cytosol, golgi, plastid	38.69	39.04
TraesCS7A01G553700.1	Wheat	cytosol	29.66	38.8
TraesCS4A01G314300.1	Wheat	cytosol	22.17	38.26
TraesCS5A01G087400.1	Wheat	cytosol	44.95	36.12
TraesCS1A01G409300.1	Wheat	cytosol	16.05	35.59
TraesCS4A01G327300.1	Wheat	cytosol	42.05	35.39
TraesCS1A01G003100.1	Wheat	cytosol	39.45	32.82
TraesCS7A01G416600.1	Wheat	cytosol	43.27	31.69
TraesCS7A01G419800.1	Wheat	cytosol, endoplasmic reticulum	44.19	31.34
KXG21363	Sorghum	cytosol	55.5	30.87
TraesCS7A01G499600.1	Wheat	cytosol	44.04	30.28
TraesCS4A01G314400.1	Wheat	cytosol	42.81	29.98
TraesCS1A01G035900.1	Wheat	endoplasmic reticulum, extracellular	42.35	29.91
TraesCS5A01G380700.1	Wheat	cytosol, nucleus, peroxisome	41.44	28.77
TraesCS6A01G389000.1	Wheat	peroxisome	40.98	28.33
TraesCS5A01G073300.1	Wheat	cytosol	33.03	28.09
TraesCS7A01G553600.1	Wheat	nucleus	34.71	26.12
TraesCS1A01G322200.1	Wheat	cytosol, nucleus, peroxisome	20.49	21.93
TraesCS1A01G409200.1	Wheat	cytosol	15.14	19.19
TraesCS5A01G087600.1	Wheat	cytosol	10.4	14.41
TraesCS6A01G414100.1	Wheat	cytosol	7.95	13.72
TraesCS4A01G389700.1	Wheat	cytosol	0.46	1.14

Protein Annotations

EnsemblPlants:TraesCS4A01G389600.1	EnsemblPlantsGene:TraesCS4A01G389600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:+:666980143..666983528

Molecular Weight (calculated)

73729.4 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.188

Length

654 amino acids

Sequence
(BLAST)

001: MEGALVSVAT GTLKPVLGKL ASLMGDEYKR LKGVRGEIKF LTDELTAMHA FLLKMSEEED PDVQEKVWMN EVRELSYGME DSIDDFMKHV DDNDTKPSSF
101: MEKIKNLLGK MKTRHRIANE ILDLKKRIIE VGERTARYKT RDAFSKTVNV TVDPRALAIF EHASMLVGMD EPKAELIKLL TEEDGCASTQ HQQVKMVSVV
201: GSGGMGKTTL ANQVYQELKG KLKCRAFVSV SRNPDIINIL RTILGEVTGQ LYTDTEGGSV QQLLANISNF LVDNSYFIVV DDIWKKQTWD VIKYAFPMAS
301: CGIIITTTRV KDVANSCQAS FGGHIYNIRP LDIVHSRQLF HGRLFNSKEN CPPHLKEVSD QILKKCDGLP LAIIAISGLL ANTERREGLW NQVKDSIGRA
401: LERNSSVEGM MKILSLSYFD LPPHLKTCLL YVSIFPEDSF IEKNDIISRW IGEEFIHKEG RYTSHEIGER CFNELLNRGL IQPGKTNEYG ELESCQVHDT
501: ILDFIISKSI EENFVTLLGV PILTIGTQSK VVRRLVLQGV NQGNSTIQPA GLVLSHVRSL SVFGGFVEIP SLEEFKHLRV LNLSHYQSLE ERHLENIVRL
601: PQLRYLNVKN TEIRKLPEQI GRLSCLELLD LRHTCVEELP ASVVNLKKID PSSC

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.