Factsheet for Os08t0372700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

nucleus: 24133045

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	72.39	71.6
TraesCS6B01G465000.1	Wheat	cytosol	39.38	62.37
TraesCS4A01G389600.1	Wheat	cytosol	42.9	59.63
TraesCS6B01G116600.1	Wheat	cytosol	30.25	58.76
TraesCS6B01G463900.1	Wheat	cytosol	42.79	58.23
TraesCS6B01G463500.1	Wheat	cytosol	46.75	56.29
TraesCSU01G071000.1	Wheat	endoplasmic reticulum, golgi, plastid	41.58	56.0
TraesCS6A01G414300.1	Wheat	cytosol	56.22	55.79
TraesCS6B01G464400.2	Wheat	cytosol, endoplasmic reticulum	46.2	55.7
HORVU6Hr1G094200.2	Barley	cytosol	51.16	55.29
TraesCS6B01G464500.1	Wheat	cytosol	39.05	54.95
TraesCS6B01G447100.1	Wheat	cytosol	45.87	54.87
TraesCSU01G071100.1	Wheat	endoplasmic reticulum, plasma membrane	55.34	54.32
TraesCSU01G071200.1	Wheat	cytosol	36.96	54.28
TraesCS6D01G399400.1	Wheat	cytosol	54.13	54.07
TraesCS6A01G414400.1	Wheat	cytosol	53.91	53.44
TraesCS7D01G086700.2	Wheat	cytosol	54.46	53.17
HORVU6Hr1G094170.1	Barley	mitochondrion	55.78	52.81
TraesCSU01G082800.1	Wheat	cytosol	53.91	52.8
TraesCS6B01G464900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	53.58	52.76
TraesCS5D01G492200.1	Wheat	cytosol	54.02	52.63
TraesCS6A01G414000.1	Wheat	cytosol	54.02	52.23
TraesCS6B01G463600.1	Wheat	cytosol	48.29	51.89
HORVU6Hr1G075320.1	Barley	mitochondrion	54.57	51.88
TraesCSU01G081600.1	Wheat	cytosol	53.36	51.76
TraesCSU01G171700.1	Wheat	cytosol	53.36	51.76
TraesCS6B01G464300.1	Wheat	cytosol	53.14	51.66
TraesCS6B01G464200.1	Wheat	cytosol	53.58	51.64
Zm00001d007688_P002	Maize	cytosol	23.76	51.55
TraesCS6B01G465800.1	Wheat	cytosol	54.24	51.46
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	51.82	50.43
TraesCS6B01G446100.1	Wheat	cytosol	51.71	49.95
TraesCS6B01G446800.1	Wheat	cytosol	51.27	49.95
TraesCS5D01G557600.2	Wheat	cytosol	51.38	49.89
TraesCS6D01G386700.1	Wheat	cytosol	51.05	49.73
TraesCS6A01G403400.1	Wheat	cytosol	51.16	49.68
TraesCSU01G168400.1	Wheat	cytosol	39.49	49.65
TraesCSU01G165600.1	Wheat	cytosol	50.83	49.62
TraesCS6A01G403300.1	Wheat	cytosol	50.72	49.46
TraesCSU01G083900.1	Wheat	cytosol	43.67	49.38
TraesCS6B01G463700.1	Wheat	cytosol	33.99	49.36
TraesCS6B01G464000.1	Wheat	cytosol	39.38	49.24
TraesCSU01G232800.1	Wheat	cytosol	34.76	48.84
TraesCS6B01G465100.1	Wheat	extracellular, mitochondrion, plasma membrane	52.04	48.81
HORVU6Hr1G084930.1	Barley	cytosol	49.73	48.14
HORVU0Hr1G017790.1	Barley	endoplasmic reticulum, golgi	36.74	47.99
TraesCSU01G196800.1	Wheat	cytosol, golgi, plastid	34.1	47.84
TraesCS6B01G447000.1	Wheat	cytosol	44.55	47.7
TraesCSU01G082900.1	Wheat	mitochondrion	37.18	46.81
TraesCSU01G204500.1	Wheat	cytosol, mitochondrion, plastid	31.79	46.76
TraesCSU01G203600.1	Wheat	cytosol	30.36	46.46
TraesCS6B01G447200.1	Wheat	cytosol	37.62	46.4
TraesCSU01G179000.1	Wheat	plasma membrane	33.22	45.21
TraesCS6D01G398700.1	Wheat	plasma membrane	52.37	45.16
HORVU6Hr1G092510.2	Barley	cytosol, plasma membrane	31.46	43.73
HORVU0Hr1G015190.1	Barley	cytosol	9.68	43.35
TraesCSU01G168100.1	Wheat	cytosol	28.38	43.14
HORVU6Hr1G092500.1	Barley	mitochondrion	28.6	42.76
TraesCS6B01G114200.1	Wheat	cytosol	48.07	42.18
TraesCS6A01G403000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	47.3	41.63
TraesCSU01G235500.1	Wheat	cytosol	18.15	41.46
Os11t0629550-00	Rice	cytosol	28.71	40.34
TraesCS6D01G076600.1	Wheat	cytosol	47.85	39.51
TraesCS6B01G116500.1	Wheat	endoplasmic reticulum, extracellular	18.7	38.9
Os11t0249000-01	Rice	cytosol	39.27	38.89
Os12t0565100-01	Rice	cytosol	29.7	38.57
Os11t0238000-00	Rice	cytosol	30.36	38.44
Os02t0272900-01	Rice	cytosol	30.91	38.28
HORVU0Hr1G015160.2	Barley	cytosol, nucleus	37.84	37.97
Os11t0265900-02	Rice	cytosol	38.28	37.66
HORVU6Hr1G014320.2	Barley	cytosol	46.97	37.46
KXG21363	Sorghum	cytosol	47.74	36.9
Os12t0564800-01	Rice	plastid	39.49	36.9
TraesCS4A01G389700.1	Wheat	cytosol	10.56	36.5
Os11t0237900-00	Rice	golgi	36.74	35.95
Os10t0132700-01	Rice	cytosol	11.0	35.59
Os08t0412100-01	Rice	plasma membrane	37.29	35.28
Os12t0273300-01	Rice	mitochondrion	35.31	34.93
HORVU6Hr1G092680.7	Barley	cytosol	16.39	34.89
Os08t0387700-01	Rice	cytosol	34.76	34.16
Os08t0388300-01	Rice	cytosol	36.52	34.09
Os11t0238700-00	Rice	cytosol	21.78	33.11
Os11t0258500-00	Rice	cytosol	35.31	33.09
TraesCSU01G208400.1	Wheat	cytosol	9.68	32.59
Os11t0237600-01	Rice	cytosol, nucleus, peroxisome	35.64	32.43
Os11t0629600-01	Rice	cytosol	20.46	32.18
Os06t0163900-01	Rice	cytosol	6.49	31.72
Os01t0335700-01	Rice	cytosol, plasma membrane	28.71	31.64
Os08t0174800-01	Rice	cytosol	26.07	29.7
TraesCS6D01G399100.1	Wheat	plasma membrane	53.91	24.69
Os12t0565200-00	Rice	cytosol	7.26	23.74
Os10t0133000-00	Rice	cytosol	4.07	21.64
Os08t0411850-00	Rice	cytosol	4.4	21.28
TraesCS6B01G446700.1	Wheat	extracellular	1.76	19.51
Os11t0629582-00	Rice	cytosol	0.99	5.49
Os08t0176200-01	Rice	plasma membrane	1.1	2.51
Os02t0273000-01	Rice	cytosol, plasma membrane	0.66	1.23

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:107275487	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:BAD05298.1
ProteinID:BAD05375.1	ProteinID:BAT05169.1	ProteinID:EAZ42534.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:NB-ARC	EnsemblPlantsGene:Os08g0372700	EnsemblPlants:Os08t0372700-00	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	UniProt:Q6ZB32	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000022F1C6	RefSeq:XP_015649273.1	SEG:seg	:	:

Description

Hypothetical conserved gene. (Os08t0372700-00)

Coordinates

chr8:+:17427398..17431448

Molecular Weight (calculated)

103438.0 Da

IEP (calculated)

7.279

GRAVY (calculated)

-0.194

Length

909 amino acids

Sequence
(BLAST)

001: MEGALVSTAT GALKPVLAKL AALLGDKYTI FKGLHKEIKS LSTELMAIHA FLLNMSEEEN PDAQDQAWMT EVRELSYDME DIIDEFMVHV DDESATPDGF
101: ISKCKKSLAN MKTKRRIAKA IEDFKSQINI VGERHARYRS EKTICRTSNT IIDHRALSIF EHASNLVGIE GPKNEVIKLL SDDDGCESKQ QHPKVVSVVG
201: FGGLGKTTLA YQVYQQLKGN FSCSVFVSVS RNPDMMRILR TILSEVTQRD YAVTEAGDEQ QLIIKISNFL SKKRYFVVID DIWNVEIWNI IKGAFSMNSR
301: CSKIITTTRI SDVARSCCSS FRGHLYNIRP LDTVHSRTLF HRRLFNPQEK CPSHLEEVSD QILKKCDGLP LAIIAISGLL ANKLRTKDQW EHVKNSIGCA
401: LERNPTVEGM ISILSLSYFD LPPHLKTCLL YLSIFPEDYV IRKNDLILRW IAEGFIHKED SNTLYESGEM CFNELVNRNL LQLEKQNYNG CRVHDTVLDF
501: IISMSKKNNF VTLVTSPCLT IEGQNKIRRL SLQVGSEEGN SIQRTMLSHA RSLDVFWLHL QEIPSLVEFR HLRVLSFQGC RWLQSQHLAN IGKLFQLRFL
601: NLRKTGLNEL PEEIGFLQNL QALNLEGSNM HRLPPHITRL GNLVHLFTDI RIQLPEGIAK MRSLETLKWV DLSNHSSNIV KELGQLENLR ELKLFMPNDD
701: ICDEHVKVIA SCLVELGRHN LRRLYIVGYT ELPNSLLPDP WCPSPLKLEE LDISDSPMVQ VPSWMRSFVQ LKRLGLILKD VSDEDLTTLG RLPSLLHLHL
801: NIPRGEPGYE DRLLISGCHG FSCLRQFYLT GQQPIFTAGS MPRLELLRVE MDESKPEFLT NASLENLPCL TTVKCLLFNF QRGEVAQNGK TAMARAMSSH
901: PNHPSLVYE

Best Arabidopsis Sequence Match ( AT3G46730.1 )
(BLAST)

001: MVDAVTGFVL NKIGGYLINE VLALMGVKDD LEELKTELTC IHGYLKDVEA REREDEVSKE WTKLVLDIAY DIEDVLDTYF LKLEERSLRR GLLRLTNKIG
101: KKRDAYNIVE DIRTLKRRIL DITRKRETFG IGSFNEPRGE NITNVRVRQL RRAPPVDQEE LVVGLEDDVK ILLVKLLSDN EKDKSYIISI FGMGGLGKTA
201: LARKLYNSGD VKRRFDCRAW TYVSQEYKTR DILIRIIRSL GIVSAEEMEK IKMFEEDEEL EVYLYGLLEG KNYMVVVDDV WDPDAWESLK RALPCDHRGS
301: KVIITTRIRA IAEGVEGTVY AHKLRFLTFE ESWTLFERKA FSNIEKVDED LQRTGKEMVK KCGGLPLAIV VLSGLLSRKR TNEWHEVCAS LWRRLKDNSI
401: HISTVFDLSF KEMRHELKLC FLYFSVFPED YEIKVEKLIH LLVAEGFIQE DEEMMMEDVA RCYIDELVDR SLVKAERIER GKVMSCRIHD LLRDLAIKKA
501: KELNFVNVYN EKQHSSDICR REVVHHLMND YYLCDRRVNK RMRSFLFIGE RRGFGYVNTT NLKLKLLRVL NMEGLLFVSK NISNTLPDVI GELIHLRYLG
601: IADTYVSILP ASISNLRFLQ TLDASGNDPF QYTTDLSKLT SLRHVIGKFV GECLIGEGVN LQTLRSISSY SWSKLNHELL RNLQDLEIYD HSKWVDQRRV
701: PLNFVSFSKP KNLRVLKLEM RNFKLSSESR TTIGLVDVNF PSLESLTLVG TTLEENSMPA LQKLPRLEDL VLKDCNYSGV KIMSISAQGF GRLKNLEMSM
801: ERRGHGLDEL RIEEEAMPSL IKLTVKGRLE LTKLMIPDRL KAFVRRN

Arabidopsis Description

RPP13L3Putative disease resistance RPP13-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.