Factsheet for TraesCS6B01G465100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G464300.1	Wheat	cytosol	72.34	74.97
TraesCS6B01G465000.1	Wheat	cytosol	41.69	70.38
TraesCS6B01G463900.1	Wheat	cytosol	47.47	68.86
TraesCSU01G071000.1	Wheat	endoplasmic reticulum, golgi, plastid	47.68	68.44
TraesCS6B01G116600.1	Wheat	cytosol	31.37	64.96
TraesCS6B01G464400.2	Wheat	cytosol, endoplasmic reticulum	49.54	63.66
TraesCS6B01G447100.1	Wheat	cytosol	49.12	62.63
TraesCS6B01G464500.1	Wheat	cytosol	41.69	62.54
TraesCS6B01G463500.1	Wheat	cytosol	48.5	62.25
TraesCS6B01G464900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	57.38	60.24
TraesCS6D01G398700.1	Wheat	plasma membrane	64.4	59.2
TraesCS6B01G464200.1	Wheat	cytosol	57.48	59.07
TraesCS6B01G463600.1	Wheat	cytosol	50.88	58.27
TraesCS6B01G446100.1	Wheat	cytosol	56.55	58.24
TraesCS6B01G463700.1	Wheat	cytosol	37.36	57.83
TraesCS6B01G446800.1	Wheat	cytosol	55.42	57.56
TraesCS6B01G465800.1	Wheat	cytosol	55.83	56.47
TraesCS6B01G447000.1	Wheat	cytosol	49.12	56.07
TraesCS6B01G464000.1	Wheat	cytosol	41.69	55.57
TraesCS6B01G447200.1	Wheat	cytosol	40.87	53.73
Zm00001d007688_P002	Maize	cytosol	23.12	53.46
TraesCS2B01G574400.1	Wheat	cytosol	36.74	53.21
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	49.54	52.23
Os08t0372700-00	Rice	nucleus	48.81	52.04
TraesCS6B01G116500.1	Wheat	endoplasmic reticulum, extracellular	20.54	45.54
TraesCS6B01G114200.1	Wheat	cytosol	48.4	45.27
TraesCS5B01G023600.1	Wheat	cytosol	39.22	44.55
TraesCS7B01G316700.1	Wheat	cytosol	38.8	42.2
TraesCS1B01G438500.1	Wheat	cytosol	26.83	41.07
TraesCS1B01G439100.1	Wheat	cytosol, extracellular, mitochondrion	19.92	40.89
TraesCS7B01G477100.1	Wheat	cytosol	20.12	40.62
TraesCS1B01G360400.1	Wheat	cytosol	33.02	40.2
TraesCS1B01G027300.1	Wheat	cytosol	38.29	40.2
TraesCS7B01G477200.1	Wheat	cytosol	23.12	39.93
TraesCS1B01G027100.1	Wheat	cytosol	37.56	39.65
TraesCS5B01G093500.1	Wheat	cytosol, golgi, peroxisome	38.08	39.17
TraesCS5B01G031600.1	Wheat	endoplasmic reticulum, extracellular	37.87	39.17
TraesCS5B01G384300.1	Wheat	cytosol	33.85	39.0
TraesCS7B01G477600.1	Wheat	cytosol	14.96	38.98
TraesCS7B01G478300.1	Wheat	cytosol	19.92	38.6
TraesCS5B01G541400.1	Wheat	cytosol	37.25	38.36
TraesCS3B01G041400.1	Wheat	cytosol, extracellular, mitochondrion	9.39	38.08
TraesCS1B01G045800.1	Wheat	cytosol	36.33	38.01
TraesCS1B01G046500.1	Wheat	endoplasmic reticulum	33.64	37.95
TraesCS3B01G541100.1	Wheat	endoplasmic reticulum, extracellular	37.67	37.75
TraesCS5B01G508100.1	Wheat	cytosol	37.56	37.68
TraesCS7B01G104800.1	Wheat	cytosol	36.22	37.62
TraesCS1B01G045900.1	Wheat	cytosol	36.12	37.55
TraesCS5B01G539700.1	Wheat	endoplasmic reticulum	35.91	37.42
TraesCS1B01G438300.1	Wheat	cytosol	11.97	37.42
TraesCS1B01G366500.2	Wheat	cytosol	36.22	37.34
KXG21363	Sorghum	cytosol	45.3	37.33
TraesCS1B01G023000.2	Wheat	cytosol	35.4	37.28
TraesCS5B01G540500.1	Wheat	cytosol	36.02	36.85
TraesCS5B01G541200.1	Wheat	plastid	13.21	36.78
TraesCS1B01G046000.1	Wheat	cytosol	33.54	36.72
TraesCS5B01G541500.1	Wheat	cytosol	35.71	36.54
TraesCS5B01G019300.1	Wheat	cytosol	9.18	36.48
TraesCS7B01G326000.1	Wheat	cytosol	36.43	36.35
TraesCS7B01G320700.1	Wheat	golgi, plasma membrane	17.54	36.32
TraesCS7B01G406700.1	Wheat	cytosol	37.25	36.32
TraesCS5B01G565500.1	Wheat	cytosol	34.78	36.28
TraesCS6B01G428300.1	Wheat	cytosol	34.88	36.27
TraesCS5B01G541300.1	Wheat	endoplasmic reticulum	35.19	36.24
TraesCS7B01G477300.1	Wheat	peroxisome	7.43	36.18
TraesCS5B01G540800.1	Wheat	endoplasmic reticulum	36.02	35.94
TraesCS1B01G108500.4	Wheat	cytosol	36.64	35.54
TraesCS6B01G428100.3	Wheat	cytosol	34.98	35.5
TraesCS5B01G540200.1	Wheat	mitochondrion	33.95	35.0
TraesCS1B01G438600.1	Wheat	cytosol, endoplasmic reticulum, extracellular	33.95	34.85
TraesCS1B01G201700.1	Wheat	cytosol	9.7	34.81
TraesCS1B01G439200.2	Wheat	cytosol	33.33	34.77
TraesCS1B01G439400.1	Wheat	cytosol, extracellular, mitochondrion	32.92	34.75
TraesCS1B01G439300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	33.23	34.7
TraesCS6B01G428000.1	Wheat	cytosol, nucleus, peroxisome	35.19	34.41
TraesCS6B01G387200.1	Wheat	endoplasmic reticulum, extracellular	33.33	34.36
TraesCS1B01G438800.1	Wheat	cytosol, endoplasmic reticulum, extracellular	32.09	34.03
TraesCS7B01G477700.2	Wheat	cytosol	35.19	33.96
TraesCS7B01G399500.1	Wheat	cytosol	27.97	33.66
TraesCS7B01G399700.1	Wheat	cytosol	27.55	33.21
TraesCS3B01G041300.1	Wheat	cytosol, golgi	23.94	31.87
TraesCS6B01G446700.1	Wheat	extracellular	2.68	31.71
TraesCS7B01G437300.1	Wheat	cytosol, plastid	33.75	31.35
TraesCS7B01G477400.1	Wheat	cytosol, plasma membrane	17.03	30.05
TraesCS1B01G438100.1	Wheat	cytosol, endoplasmic reticulum	12.69	28.67
TraesCS1B01G438200.1	Wheat	cytosol	13.62	27.16
TraesCS6B01G467900.1	Wheat	endoplasmic reticulum	33.33	24.27

Protein Annotations

EnsemblPlants:TraesCS6B01G465100.1	EnsemblPlantsGene:TraesCS6B01G465100	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:-:716224153..716231966

Molecular Weight (calculated)

108684.0 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.103

Length

969 amino acids

Sequence
(BLAST)

001: MEGALVSAAA GALRPILGKL SALLGDEYMR FKSVRKEIKS LTHELAAMDA FLLKMSEEEE PDVQDKVWMN EVRELSYDME DTIDDFMKHV DDKDTKPAGF
101: MDKIKSSLGK MKAQHRIGSE IQELKKQITE VGDRNERYKQ HEASSNTRNA VVDPRALSIF EQASKLVGID KPKLEIIKLL TEQDGCVSEK QQLKLVSIVG
201: CGGMGKTTLA NQVYEDLKGK FECGAFLSVS RNPNMMNLLR TILSEVSGQD YANTKAGSIQ QLISKIIYVL ANKRYFVVVD DIWDVDTWDV IKCAFPMTSS
301: GSIVITTTRM NDVAESCQSS CSGSIYNMRP LEMVHSRQLF HIRLFNSNED CPSQLQKVSD AILRKCAGLP LAIIAISGLL ATTERTECMW NKVKDSIGRA
401: LERNRSVEAM IKILSLSYFD LPPDLKTCLL YLSIFPEDSI IEKEALIWRW IAEGFIHRDG RYTAHWLGER CFNELLNRSL IQVASINEYG EVESCRVHDI
501: ILDFIVSKSI EESFVTQVSM QYIARGTQSK VRRLSLQVDE DGNSIRKIDM VLSHVRSLNV SGYSMEIPPL GKFGHLRVVD HEFCHQVVNS HLINIGRLFQ
601: LRHLNLGWTG ISELPEEIGH LKCLEMLDIR GTNVQELPAT IVNLGRLVYL LHDSSVKIPN GIENLQALEK LEEVNVYRQP FKFCRELGQL QNVRVLALDF
701: GGDSIPSQEN VVMEYNEAIA SSLRKLGGHM MSSLTLSNAT TFLRQGPFCH VPLSVQELIM TKNSHMPQVP KWVSSLVNLQ LLRLEVYEFG QEDVCILGSL
801: PALLILEVTG MGKGSDTSLT VSRNVGFRCL KKFSLGACGW MVFEAGSMPK LEKLETGIQF NKQPESHTAS GNALDIGMGL GNLPSLITLK FSIYAWDDST
901: LAAAQAAMER AAVTHPNRPT LIFQKIGTSR IEVRTIKSQD FTYSMIFLLN LLAHHMFMFP SQYKATSSS

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.