Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G027300.1 | Wheat | cytosol | 65.58 | 65.22 |
| TraesCS1B01G023000.2 | Wheat | cytosol | 61.44 | 61.3 |
| HORVU5Hr1G125350.1 | Barley | cytosol | 41.39 | 54.83 |
| TraesCS7B01G406700.1 | Wheat | cytosol | 57.08 | 52.72 |
| Zm00001d007323_P001 | Maize | cytosol | 51.74 | 49.33 |
| TraesCS6B01G465000.1 | Wheat | cytosol | 28.32 | 45.3 |
| TraesCS6B01G463900.1 | Wheat | cytosol | 32.46 | 44.61 |
| TraesCS6B01G116600.1 | Wheat | cytosol | 22.33 | 43.8 |
| TraesCS6B01G464500.1 | Wheat | cytosol | 30.17 | 42.88 |
| TraesCS6B01G447100.1 | Wheat | cytosol | 34.97 | 42.24 |
| TraesCS6B01G464400.2 | Wheat | cytosol, endoplasmic reticulum | 34.64 | 42.18 |
| TraesCS1B01G438500.1 | Wheat | cytosol | 28.98 | 42.02 |
| TraesCS2B01G574400.1 | Wheat | cytosol | 30.61 | 42.0 |
| TraesCS7B01G477100.1 | Wheat | cytosol | 21.9 | 41.88 |
| TraesCS7B01G477200.1 | Wheat | cytosol | 25.05 | 41.0 |
| TraesCS5B01G541200.1 | Wheat | plastid | 15.47 | 40.8 |
| TraesCS5B01G031600.1 | Wheat | endoplasmic reticulum, extracellular | 41.61 | 40.77 |
| TraesCS1B01G439100.1 | Wheat | cytosol, extracellular, mitochondrion | 20.91 | 40.68 |
| TraesCS5B01G384300.1 | Wheat | cytosol | 37.25 | 40.67 |
| TraesCS3B01G041400.1 | Wheat | cytosol, extracellular, mitochondrion | 10.57 | 40.59 |
| TraesCS5B01G093500.1 | Wheat | cytosol, golgi, peroxisome | 41.5 | 40.45 |
| TraesCS6B01G463500.1 | Wheat | cytosol | 33.22 | 40.4 |
| TraesCS5B01G019300.1 | Wheat | cytosol | 10.68 | 40.16 |
| TraesCS6B01G464000.1 | Wheat | cytosol | 31.48 | 39.75 |
| TraesCS6B01G464300.1 | Wheat | cytosol | 40.41 | 39.68 |
| TraesCS3B01G541100.1 | Wheat | endoplasmic reticulum, extracellular | 41.61 | 39.5 |
| TraesCS6B01G446800.1 | Wheat | cytosol | 40.09 | 39.44 |
| TraesCS6B01G464200.1 | Wheat | cytosol | 40.09 | 39.02 |
| TraesCS7B01G477600.1 | Wheat | cytosol | 15.8 | 38.98 |
| TraesCS6B01G464900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.11 | 38.89 |
| TraesCS6B01G446100.1 | Wheat | cytosol | 39.87 | 38.89 |
| TraesCS7B01G478300.1 | Wheat | cytosol | 20.91 | 38.4 |
| TraesCS6B01G447000.1 | Wheat | cytosol | 35.4 | 38.28 |
| TraesCS6B01G447200.1 | Wheat | cytosol | 30.72 | 38.26 |
| TraesCS6B01G465800.1 | Wheat | cytosol | 39.54 | 37.89 |
| TraesCS1B01G366500.2 | Wheat | cytosol | 38.67 | 37.77 |
| TraesCS6B01G465100.1 | Wheat | extracellular, mitochondrion, plasma membrane | 39.65 | 37.56 |
| TraesCS1B01G045900.1 | Wheat | cytosol | 38.13 | 37.55 |
| TraesCS5B01G541500.1 | Wheat | cytosol | 38.67 | 37.49 |
| TraesCS7B01G316700.1 | Wheat | cytosol | 36.38 | 37.49 |
| TraesCS6B01G428300.1 | Wheat | cytosol | 38.02 | 37.45 |
| TraesCS1B01G438300.1 | Wheat | cytosol | 12.64 | 37.42 |
| TraesCS1B01G045800.1 | Wheat | cytosol | 37.69 | 37.37 |
| TraesCS1B01G046500.1 | Wheat | endoplasmic reticulum | 34.86 | 37.25 |
| TraesCS5B01G539700.1 | Wheat | endoplasmic reticulum | 37.69 | 37.2 |
| TraesCS5B01G565500.1 | Wheat | cytosol | 37.58 | 37.14 |
| TraesCS6B01G463600.1 | Wheat | cytosol | 34.2 | 37.12 |
| TraesCS5B01G540500.1 | Wheat | cytosol | 38.13 | 36.96 |
| TraesCS5B01G508100.1 | Wheat | cytosol | 38.67 | 36.75 |
| TraesCS1B01G046000.1 | Wheat | cytosol | 35.4 | 36.72 |
| TraesCS1B01G201700.1 | Wheat | cytosol | 10.78 | 36.67 |
| TraesCS7B01G104800.1 | Wheat | cytosol | 37.25 | 36.66 |
| TraesCS5B01G541300.1 | Wheat | endoplasmic reticulum | 37.47 | 36.56 |
| TraesCS1B01G439400.1 | Wheat | cytosol, extracellular, mitochondrion | 36.38 | 36.38 |
| TraesCS6B01G463700.1 | Wheat | cytosol | 24.73 | 36.26 |
| TraesCS5B01G541400.1 | Wheat | cytosol | 37.15 | 36.24 |
| TraesCS1B01G360400.1 | Wheat | cytosol | 31.37 | 36.18 |
| TraesCS5B01G023600.1 | Wheat | cytosol | 33.55 | 36.11 |
| TraesCS6B01G428100.3 | Wheat | cytosol | 37.36 | 35.92 |
| TraesCS6B01G428000.1 | Wheat | cytosol, nucleus, peroxisome | 38.67 | 35.82 |
| TraesCS5B01G540200.1 | Wheat | mitochondrion | 36.6 | 35.74 |
| TraesCS1B01G439200.2 | Wheat | cytosol | 36.06 | 35.63 |
| TraesCS7B01G399700.1 | Wheat | cytosol | 31.05 | 35.45 |
| TraesCS1B01G439300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 35.62 | 35.24 |
| TraesCS5B01G540800.1 | Wheat | endoplasmic reticulum | 37.25 | 35.22 |
| TraesCS1B01G438600.1 | Wheat | cytosol, endoplasmic reticulum, extracellular | 35.95 | 34.96 |
| TraesCS1B01G438800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular | 34.75 | 34.9 |
| TraesCS7B01G320700.1 | Wheat | golgi, plasma membrane | 17.76 | 34.83 |
| TraesCS6B01G387200.1 | Wheat | endoplasmic reticulum, extracellular | 35.62 | 34.79 |
| TraesCS7B01G399500.1 | Wheat | cytosol | 30.5 | 34.78 |
| TraesCS1B01G108500.4 | Wheat | cytosol | 37.25 | 34.23 |
| TraesCS7B01G326000.1 | Wheat | cytosol | 36.17 | 34.19 |
| TraesCS3B01G041300.1 | Wheat | cytosol, golgi | 26.91 | 33.93 |
| TraesCS7B01G477700.2 | Wheat | cytosol | 36.38 | 33.27 |
| TraesCS6B01G446700.1 | Wheat | extracellular | 2.94 | 32.93 |
| TraesCS7B01G477300.1 | Wheat | peroxisome | 7.08 | 32.66 |
| TraesCS7B01G437300.1 | Wheat | cytosol, plastid | 35.19 | 30.97 |
| TraesCS6B01G114200.1 | Wheat | cytosol | 34.75 | 30.79 |
| TraesCS1B01G438100.1 | Wheat | cytosol, endoplasmic reticulum | 14.16 | 30.3 |
| TraesCS7B01G477400.1 | Wheat | cytosol, plasma membrane | 16.88 | 28.23 |
| TraesCS1B01G438200.1 | Wheat | cytosol | 14.92 | 28.19 |
| TraesCS6B01G116500.1 | Wheat | endoplasmic reticulum, extracellular | 13.29 | 27.92 |
| TraesCS6B01G467900.1 | Wheat | endoplasmic reticulum | 33.55 | 23.14 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF16 | InterPro:RX-like_CC |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1B01G027100 | EnsemblPlants:TraesCS1B01G027100.1 | TIGR:cd14798 | SEG:seg |
Description
No Description!
Coordinates
chr1B:-:13178384..13191220
Molecular Weight (calculated)
104318.0 Da
IEP (calculated)
7.590
GRAVY (calculated)
-0.223
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MERFLVSAST GAMSSLLGKL ATIISDEFKL LKGVRADIRF LKDELEAMQA FLMVMADIEE PDKQTKLRAD AVREMSYEIE DNIDKFMVLV EREPRSESDG
101: FAKLFNSSTK KIGDIKIRHK IAKDVKDIKN QVKEVNKRYA RYKIDESSRP RVEKTDPRLR AIYKDTSELI GIEGPRDDIV QWLSNEKGES VHQLKVVSIV
201: GYGGLGKTTL ARQVYEKLGS NYKCRAFVSI SRTPDMTKIL SSILSQLRNQ DHAHVGDTQL IIEQIRNFLK DKRYFIVIDD VWDVQTWQAM ECALVRNSCG
301: SLIMTTTRIN DVAKSCCSSD KDLVYKIQPL NDVHSKKLFF KRIFGSEEKC PANLKEASEG IVKRCGGLPL ALNAISSLLA TGKTKQEWDH VQSSIGFARG
401: KNYEIDAMNY ILLSYFDLPL HLRSCLLYLT MFPEDYEIQK ERLVHRWMAE GFIRGEDGED LVELGEAYFH ELINRSLIQE VGIGYDGKAQ ACRVHDTVLD
501: FLIYKSTHEN FCTLLSTHSK TDSRVRRLSL MGDDDQGNLE QLDLSHARSL GAFGKSREYL PSLVKLNALR VLDVFHCHAF KNHHIKDIGR LFQLRYLNLC
601: WTVISELPSQ IGDLKFLETL DVFGTKLSHL PQSVTQLRRL ARLFVPAGLK LPDGIGNMTS LQEIKDINTF VQSENVLEDL GNLTDMRKLK ITWDSAKSDK
701: ASSKEKILVS SLCKLDQFKL RNLVVSIFLA ENDLTFIRHP FFPSLHSIRA IFLRRGQLRW ISKWLISLAN LENLGVDAEE IEQQDVEMVG SIPTLLEYNQ
801: FSQCAGPVII RGGFQQLQSL EFVLTVSGGL MFEVGAMPNL KTFYLHIFIH KFKPGGFDFG IQHLSSLAFL RVGIFCGGVR AADVEAAEGA FKSMTDAHPN
901: RPTLETSRRR TEDMLQDE
101: FAKLFNSSTK KIGDIKIRHK IAKDVKDIKN QVKEVNKRYA RYKIDESSRP RVEKTDPRLR AIYKDTSELI GIEGPRDDIV QWLSNEKGES VHQLKVVSIV
201: GYGGLGKTTL ARQVYEKLGS NYKCRAFVSI SRTPDMTKIL SSILSQLRNQ DHAHVGDTQL IIEQIRNFLK DKRYFIVIDD VWDVQTWQAM ECALVRNSCG
301: SLIMTTTRIN DVAKSCCSSD KDLVYKIQPL NDVHSKKLFF KRIFGSEEKC PANLKEASEG IVKRCGGLPL ALNAISSLLA TGKTKQEWDH VQSSIGFARG
401: KNYEIDAMNY ILLSYFDLPL HLRSCLLYLT MFPEDYEIQK ERLVHRWMAE GFIRGEDGED LVELGEAYFH ELINRSLIQE VGIGYDGKAQ ACRVHDTVLD
501: FLIYKSTHEN FCTLLSTHSK TDSRVRRLSL MGDDDQGNLE QLDLSHARSL GAFGKSREYL PSLVKLNALR VLDVFHCHAF KNHHIKDIGR LFQLRYLNLC
601: WTVISELPSQ IGDLKFLETL DVFGTKLSHL PQSVTQLRRL ARLFVPAGLK LPDGIGNMTS LQEIKDINTF VQSENVLEDL GNLTDMRKLK ITWDSAKSDK
701: ASSKEKILVS SLCKLDQFKL RNLVVSIFLA ENDLTFIRHP FFPSLHSIRA IFLRRGQLRW ISKWLISLAN LENLGVDAEE IEQQDVEMVG SIPTLLEYNQ
801: FSQCAGPVII RGGFQQLQSL EFVLTVSGGL MFEVGAMPNL KTFYLHIFIH KFKPGGFDFG IQHLSSLAFL RVGIFCGGVR AADVEAAEGA FKSMTDAHPN
901: RPTLETSRRR TEDMLQDE
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.