Factsheet for TraesCS5B01G019300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G409400.1	Wheat	extracellular	61.48	70.09
TraesCS3B01G041400.1	Wheat	cytosol, extracellular, mitochondrion	59.43	60.67
TraesCS1B01G438300.1	Wheat	cytosol	71.31	56.13
TraesCS1B01G201700.1	Wheat	cytosol	51.64	46.67
TraesCS7B01G477300.1	Wheat	peroxisome	37.3	45.73
TraesCS1B01G439100.1	Wheat	cytosol, extracellular, mitochondrion	71.72	37.08
TraesCS7B01G477600.1	Wheat	cytosol	52.05	34.14
TraesCS7B01G477100.1	Wheat	cytosol	54.51	27.71
TraesCS1B01G438500.1	Wheat	cytosol	71.31	27.49
TraesCS5B01G541200.1	Wheat	plastid	38.52	27.01
TraesCS7B01G478300.1	Wheat	cytosol	49.59	24.2
TraesCS7B01G477200.1	Wheat	cytosol	54.92	23.89
TraesCS1B01G439400.1	Wheat	cytosol, extracellular, mitochondrion	72.13	19.17
TraesCS1B01G439200.2	Wheat	cytosol	71.72	18.84
TraesCS1B01G439300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	71.31	18.75
TraesCS1B01G438800.1	Wheat	cytosol, endoplasmic reticulum, extracellular	69.26	18.49
TraesCS1B01G438600.1	Wheat	cytosol, endoplasmic reticulum, extracellular	71.31	18.43
TraesCS6B01G116600.1	Wheat	cytosol	34.02	17.73
TraesCS6B01G465000.1	Wheat	cytosol	36.89	15.68
TraesCS6B01G387200.1	Wheat	endoplasmic reticulum, extracellular	52.46	13.62
TraesCS6B01G463900.1	Wheat	cytosol	35.66	13.02
TraesCS7B01G477700.2	Wheat	cytosol	53.28	12.95
TraesCS6B01G464500.1	Wheat	cytosol	33.61	12.69
TraesCS2B01G574400.1	Wheat	cytosol	33.2	12.11
TraesCS7B01G399700.1	Wheat	cytosol	39.75	12.06
TraesCS7B01G399500.1	Wheat	cytosol	39.75	12.05
TraesCS1B01G360400.1	Wheat	cytosol	38.52	11.81
TraesCS1B01G046500.1	Wheat	endoplasmic reticulum	39.75	11.29
TraesCS6B01G447100.1	Wheat	cytosol	34.84	11.18
TraesCS6B01G464400.2	Wheat	cytosol, endoplasmic reticulum	34.43	11.14
TraesCS1B01G023000.2	Wheat	cytosol	41.8	11.09
TraesCS5B01G093500.1	Wheat	cytosol, golgi, peroxisome	42.62	11.04
TraesCS6B01G463500.1	Wheat	cytosol	34.02	10.99
TraesCS5B01G031600.1	Wheat	endoplasmic reticulum, extracellular	42.21	10.99
TraesCS5B01G384300.1	Wheat	cytosol	37.7	10.94
TraesCS3B01G541100.1	Wheat	endoplasmic reticulum, extracellular	43.03	10.86
TraesCS1B01G027100.1	Wheat	cytosol	40.16	10.68
TraesCS5B01G541400.1	Wheat	cytosol	40.98	10.63
TraesCS5B01G565500.1	Wheat	cytosol	39.75	10.44
TraesCS1B01G366500.2	Wheat	cytosol	40.16	10.43
TraesCS5B01G539700.1	Wheat	endoplasmic reticulum	39.34	10.32
TraesCS1B01G045900.1	Wheat	cytosol	39.34	10.3
TraesCS1B01G027300.1	Wheat	cytosol	38.93	10.29
TraesCS1B01G045800.1	Wheat	cytosol	38.93	10.26
TraesCS7B01G104800.1	Wheat	cytosol	38.93	10.18
Os11t0265900-02	Rice	cytosol	38.11	10.06
TraesCS6B01G428300.1	Wheat	cytosol	38.11	9.98
TraesCS5B01G541500.1	Wheat	cytosol	38.52	9.93
TraesCS5B01G540500.1	Wheat	cytosol	38.52	9.93
TraesCS5B01G540800.1	Wheat	endoplasmic reticulum	39.34	9.89
TraesCS5B01G508100.1	Wheat	cytosol	38.93	9.83
TraesCS6B01G428100.3	Wheat	cytosol	38.11	9.74
TraesCS7B01G326000.1	Wheat	cytosol	38.52	9.68
TraesCS7B01G406700.1	Wheat	cytosol	39.34	9.66
TraesCS6B01G446800.1	Wheat	cytosol	36.89	9.65
TraesCS6B01G428000.1	Wheat	cytosol, nucleus, peroxisome	38.93	9.59
TraesCS6B01G464300.1	Wheat	cytosol	36.48	9.52
TraesCS6B01G464900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	35.25	9.32
TraesCS5B01G541300.1	Wheat	endoplasmic reticulum	35.66	9.25
TraesCS1B01G108500.4	Wheat	cytosol	37.7	9.21
TraesCS6B01G465100.1	Wheat	extracellular, mitochondrion, plasma membrane	36.48	9.18
TraesCS6B01G446100.1	Wheat	cytosol	35.25	9.14
TraesCS6B01G464200.1	Wheat	cytosol	35.25	9.12
TraesCS1B01G046000.1	Wheat	cytosol	32.79	9.04
TraesCS6B01G465800.1	Wheat	cytosol	35.25	8.98
TraesCS5B01G540200.1	Wheat	mitochondrion	34.43	8.94
TraesCS5B01G023600.1	Wheat	cytosol	30.74	8.79
TraesCS7B01G316700.1	Wheat	cytosol	29.1	7.97
TraesCS7B01G437300.1	Wheat	cytosol, plastid	34.02	7.96
TraesCS6B01G114200.1	Wheat	cytosol	29.1	6.85
TraesCS6B01G447000.1	Wheat	cytosol	23.36	6.71
TraesCS6B01G463600.1	Wheat	cytosol	22.54	6.5
TraesCS6B01G467900.1	Wheat	endoplasmic reticulum	32.79	6.01
TraesCS6B01G464000.1	Wheat	cytosol	8.2	2.75
TraesCS6B01G447200.1	Wheat	cytosol	6.56	2.17
TraesCS3B01G041300.1	Wheat	cytosol, golgi	2.05	0.69
TraesCS1B01G438200.1	Wheat	cytosol	1.23	0.62
TraesCS1A01G409200.1	Wheat	cytosol	1.23	0.58
TraesCS6B01G446700.1	Wheat	extracellular	0.0	0.0
TraesCS7B01G320700.1	Wheat	golgi, plasma membrane	0.0	0.0
TraesCS6B01G116500.1	Wheat	endoplasmic reticulum, extracellular	0.0	0.0
TraesCS7B01G477400.1	Wheat	cytosol, plasma membrane	0.0	0.0
TraesCS1B01G438100.1	Wheat	cytosol, endoplasmic reticulum	0.0	0.0
TraesCS1A01G409300.1	Wheat	cytosol	0.0	0.0
TraesCS6B01G463700.1	Wheat	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5B01G019300.1	EnsemblPlantsGene:TraesCS5B01G019300	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:NB-ARC	InterPro:P-loop_NTPase	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR44382
PFAM:PF00931	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr5B:-:18710486..18711301

Molecular Weight (calculated)

28048.4 Da

IEP (calculated)

9.848

GRAVY (calculated)

-0.361

Length

244 amino acids

Sequence
(BLAST)

001: MAGVSAGTGA MSSLLGKLSA LLTDEYKLLK GIRKEIQFLE RELGRMRAYL HILADMDKLD NLTKKRRDSL RDLSYEMEDC IDRFMDRLGT GDARRGFMRT
101: TARRLRTIWA RHDIATLIRD LKARVLQETE LHDRYKLDEG YYSATRPVQI DPRMTVLHEE VKGLVAMDAP VKHISALLMD QSMELKVVPI VGPRGLRKST
201: LAMEVYRKIG RDFRCRASVS VSRALDLEKF LKDILSQIDE SREC

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.