Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G035900.1 | Wheat | endoplasmic reticulum, extracellular | 85.1 | 78.94 |
| TraesCS1B01G046000.1 | Wheat | cytosol | 80.09 | 77.74 |
| TraesCS1B01G045800.1 | Wheat | cytosol | 81.84 | 75.92 |
| TraesCS1B01G045900.1 | Wheat | cytosol | 80.56 | 74.25 |
| HORVU1Hr1G005470.2 | Barley | cytosol | 79.28 | 73.23 |
| HORVU1Hr1G005520.1 | Barley | cytosol | 47.15 | 67.28 |
| TraesCS5B01G541200.1 | Wheat | plastid | 27.12 | 66.95 |
| TraesCS1B01G366500.2 | Wheat | cytosol | 63.1 | 57.66 |
| TraesCS6B01G428300.1 | Wheat | cytosol | 62.4 | 57.51 |
| Os10t0132700-01 | Rice | cytosol | 18.74 | 57.3 |
| TraesCS5B01G539700.1 | Wheat | endoplasmic reticulum | 61.93 | 57.2 |
| TraesCS5B01G565500.1 | Wheat | cytosol | 61.82 | 57.16 |
| TraesCS5B01G540500.1 | Wheat | cytosol | 62.98 | 57.13 |
| TraesCS5B01G541500.1 | Wheat | cytosol | 62.75 | 56.92 |
| TraesCS5B01G541300.1 | Wheat | endoplasmic reticulum | 62.28 | 56.85 |
| TraesCS7B01G104800.1 | Wheat | cytosol | 61.7 | 56.81 |
| TraesCS5B01G541400.1 | Wheat | cytosol | 62.05 | 56.64 |
| TraesCS6B01G428100.3 | Wheat | cytosol | 61.23 | 55.08 |
| TraesCS5B01G540800.1 | Wheat | endoplasmic reticulum | 62.17 | 54.99 |
| TraesCS6B01G428000.1 | Wheat | cytosol, nucleus, peroxisome | 61.23 | 53.08 |
| TraesCS5B01G540200.1 | Wheat | mitochondrion | 57.28 | 52.34 |
| TraesCS7B01G477200.1 | Wheat | cytosol | 29.1 | 44.56 |
| TraesCS6B01G465000.1 | Wheat | cytosol | 29.34 | 43.9 |
| TraesCS1B01G439100.1 | Wheat | cytosol, extracellular, mitochondrion | 23.98 | 43.64 |
| TraesCS1B01G438500.1 | Wheat | cytosol | 32.13 | 43.6 |
| TraesCS7B01G477600.1 | Wheat | cytosol | 18.86 | 43.55 |
| TraesCS7B01G477100.1 | Wheat | cytosol | 24.33 | 43.54 |
| TraesCS3B01G041400.1 | Wheat | cytosol, extracellular, mitochondrion | 11.87 | 42.68 |
| TraesCS6B01G463900.1 | Wheat | cytosol | 33.06 | 42.52 |
| TraesCS6B01G116600.1 | Wheat | cytosol | 22.82 | 41.88 |
| TraesCS7B01G478300.1 | Wheat | cytosol | 24.33 | 41.8 |
| TraesCS6B01G464500.1 | Wheat | cytosol | 31.2 | 41.49 |
| TraesCS5B01G384300.1 | Wheat | cytosol | 40.28 | 41.14 |
| TraesCS6B01G463500.1 | Wheat | cytosol | 35.51 | 40.4 |
| TraesCS6B01G464400.2 | Wheat | cytosol, endoplasmic reticulum | 35.39 | 40.32 |
| TraesCS5B01G019300.1 | Wheat | cytosol | 11.29 | 39.75 |
| TraesCS6B01G447100.1 | Wheat | cytosol | 35.16 | 39.74 |
| TraesCS5B01G031600.1 | Wheat | endoplasmic reticulum, extracellular | 42.84 | 39.27 |
| TraesCS5B01G093500.1 | Wheat | cytosol, golgi, peroxisome | 42.49 | 38.75 |
| TraesCS7B01G477300.1 | Wheat | peroxisome | 8.96 | 38.69 |
| TraesCS2B01G574400.1 | Wheat | cytosol | 29.8 | 38.27 |
| TraesCS3B01G541100.1 | Wheat | endoplasmic reticulum, extracellular | 42.96 | 38.16 |
| TraesCS1B01G201700.1 | Wheat | cytosol | 11.99 | 38.15 |
| TraesCS1B01G438300.1 | Wheat | cytosol | 13.74 | 38.06 |
| TraesCS1B01G360400.1 | Wheat | cytosol | 34.46 | 37.19 |
| TraesCS6B01G464900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.0 | 36.29 |
| TraesCS7B01G399500.1 | Wheat | cytosol | 33.99 | 36.27 |
| TraesCS7B01G399700.1 | Wheat | cytosol | 33.76 | 36.07 |
| TraesCS6B01G446800.1 | Wheat | cytosol | 38.42 | 35.37 |
| TraesCS1B01G027300.1 | Wheat | cytosol | 37.72 | 35.1 |
| TraesCS6B01G464300.1 | Wheat | cytosol | 38.07 | 34.97 |
| TraesCS6B01G463600.1 | Wheat | cytosol | 34.34 | 34.87 |
| TraesCS1B01G027100.1 | Wheat | cytosol | 37.25 | 34.86 |
| TraesCS6B01G446100.1 | Wheat | cytosol | 38.18 | 34.86 |
| TraesCS1B01G439400.1 | Wheat | cytosol, extracellular, mitochondrion | 37.14 | 34.75 |
| TraesCS6B01G463700.1 | Wheat | cytosol | 25.26 | 34.66 |
| TraesCS7B01G320700.1 | Wheat | golgi, plasma membrane | 18.86 | 34.62 |
| TraesCS5B01G023600.1 | Wheat | cytosol | 34.34 | 34.58 |
| TraesCS6B01G464000.1 | Wheat | cytosol | 29.22 | 34.53 |
| TraesCS1B01G023000.2 | Wheat | cytosol | 36.9 | 34.46 |
| TraesCS6B01G387200.1 | Wheat | endoplasmic reticulum, extracellular | 37.6 | 34.36 |
| TraesCS6B01G465800.1 | Wheat | cytosol | 38.07 | 34.13 |
| TraesCS1B01G439200.2 | Wheat | cytosol | 36.67 | 33.91 |
| TraesCS1B01G438600.1 | Wheat | cytosol, endoplasmic reticulum, extracellular | 37.25 | 33.9 |
| TraesCS1B01G439300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 36.55 | 33.84 |
| TraesCS6B01G464200.1 | Wheat | cytosol | 37.14 | 33.83 |
| TraesCS6B01G447200.1 | Wheat | cytosol | 28.87 | 33.65 |
| TraesCS6B01G465100.1 | Wheat | extracellular, mitochondrion, plasma membrane | 37.95 | 33.64 |
| TraesCS6B01G447000.1 | Wheat | cytosol | 33.06 | 33.45 |
| TraesCS7B01G326000.1 | Wheat | cytosol | 37.49 | 33.16 |
| TraesCS1B01G438800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular | 35.27 | 33.15 |
| TraesCS7B01G406700.1 | Wheat | cytosol | 38.3 | 33.1 |
| TraesCS7B01G316700.1 | Wheat | cytosol | 33.64 | 32.44 |
| TraesCS1B01G108500.4 | Wheat | cytosol | 37.02 | 31.83 |
| TraesCS7B01G477700.2 | Wheat | cytosol | 36.9 | 31.57 |
| TraesCS5B01G508100.1 | Wheat | cytosol | 35.51 | 31.57 |
| TraesCS7B01G437300.1 | Wheat | cytosol, plastid | 36.9 | 30.39 |
| TraesCS3B01G041300.1 | Wheat | cytosol, golgi | 25.73 | 30.36 |
| TraesCS6B01G114200.1 | Wheat | cytosol | 34.34 | 28.47 |
| TraesCS1B01G438100.1 | Wheat | cytosol, endoplasmic reticulum | 13.39 | 26.81 |
| TraesCS6B01G116500.1 | Wheat | endoplasmic reticulum, extracellular | 13.15 | 25.86 |
| TraesCS7B01G477400.1 | Wheat | cytosol, plasma membrane | 15.48 | 24.23 |
| TraesCS1B01G438200.1 | Wheat | cytosol | 13.62 | 24.07 |
| TraesCS6B01G467900.1 | Wheat | endoplasmic reticulum | 36.2 | 23.37 |
| Os10t0133000-00 | Rice | cytosol | 3.03 | 15.2 |
| TraesCS6B01G446700.1 | Wheat | extracellular | 0.23 | 2.44 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF38 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS1B01G046500 | EnsemblPlants:TraesCS1B01G046500.1 | TIGR:cd14798 | SEG:seg |
Description
No Description!
Coordinates
chr1B:+:26494729..26497698
Molecular Weight (calculated)
96373.2 Da
IEP (calculated)
7.287
GRAVY (calculated)
-0.114
Length
859 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAPVVTAAL GALGPLLAKL ANLLANECGR LKMVRREIWS LKAELAGMHG ALTKYTRLEN PDEQVKIWVS LVRELSYDTX DCFDKFIHQL GDGGGDDGGF
101: KEIFRKMARR LKTLGARHGI ASQIDDLKLR IKQVKELKTS YKLDDVASST TGHATVDPRL AALFAEEAHL VGIDGPRDDL AKWMMEEENK QRRRVLSIVG
201: FGGLGKTTLA NEVYRKIQGH FDCHALVSVS QKPDTKKIIK DLISYMSCNA EFTKDLESWD EQKSIGKLRE LLQDKRYLVI IDDIWSTLAW KAINCAFPEN
301: DSSSRIITTT RILEVARSCC PNRADRIYEM TPLSDIHSER LFFNRIFGPD DRCPDMLIEV SNTILKKCGG LPLAIISITG LLANRPRVKE EWEKVKRSIG
401: SDLNGNQSLE GMKNILSLSY NDLPPNLKTV LLHLSNFPED YVIDRERLVR QWIAEGFISE QRGRSCQEVA ESYFYELINK SLVQPVDIRY DGKVRACRVH
501: DMMLELIISK SIEENFITVV NGSQTVWGNS QCSIRRLSIQ DIDQELASVL AKKDLSHVRS LIITSSDRMK HLPSLTKFET LRVLDFQGCR GVAQYDMDGM
601: ENLFQLKYLS FNGTDISELP SGVVMLLDLE TLDLRDTEIR DFPARIVQLT KLQHLFSGST VSKIPTGIGN MTNLREISGF NITISSADAV KELGSLINLK
701: VLHLLCWRTS EESPNYKSSS EMLLTALCKL GSYKLQSMWI GGGNSSLFEL LDCWAPLPAC LKRFEMDTLY CLSKLPKWIT PALTSLACLN INLSVITEEV
801: LGILGELHVL LCLKLYTDKV HKDVLVLQGR GFSCLKELVY EPFGEGAGTL LLGRGIAKA
101: KEIFRKMARR LKTLGARHGI ASQIDDLKLR IKQVKELKTS YKLDDVASST TGHATVDPRL AALFAEEAHL VGIDGPRDDL AKWMMEEENK QRRRVLSIVG
201: FGGLGKTTLA NEVYRKIQGH FDCHALVSVS QKPDTKKIIK DLISYMSCNA EFTKDLESWD EQKSIGKLRE LLQDKRYLVI IDDIWSTLAW KAINCAFPEN
301: DSSSRIITTT RILEVARSCC PNRADRIYEM TPLSDIHSER LFFNRIFGPD DRCPDMLIEV SNTILKKCGG LPLAIISITG LLANRPRVKE EWEKVKRSIG
401: SDLNGNQSLE GMKNILSLSY NDLPPNLKTV LLHLSNFPED YVIDRERLVR QWIAEGFISE QRGRSCQEVA ESYFYELINK SLVQPVDIRY DGKVRACRVH
501: DMMLELIISK SIEENFITVV NGSQTVWGNS QCSIRRLSIQ DIDQELASVL AKKDLSHVRS LIITSSDRMK HLPSLTKFET LRVLDFQGCR GVAQYDMDGM
601: ENLFQLKYLS FNGTDISELP SGVVMLLDLE TLDLRDTEIR DFPARIVQLT KLQHLFSGST VSKIPTGIGN MTNLREISGF NITISSADAV KELGSLINLK
701: VLHLLCWRTS EESPNYKSSS EMLLTALCKL GSYKLQSMWI GGGNSSLFEL LDCWAPLPAC LKRFEMDTLY CLSKLPKWIT PALTSLACLN INLSVITEEV
801: LGILGELHVL LCLKLYTDKV HKDVLVLQGR GFSCLKELVY EPFGEGAGTL LLGRGIAKA
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.