Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 5
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G071000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 60.72 | 94.81 |
| TraesCS6D01G399700.1 | Wheat | cytosol | 5.22 | 87.3 |
| TraesCS6B01G464300.1 | Wheat | cytosol | 60.44 | 68.13 |
| TraesCS6B01G465100.1 | Wheat | extracellular, mitochondrion, plasma membrane | 59.2 | 64.4 |
| TraesCS6D01G399400.1 | Wheat | cytosol | 53.23 | 61.65 |
| TraesCS5D01G492200.1 | Wheat | cytosol | 53.7 | 60.66 |
| TraesCS7D01G086700.2 | Wheat | cytosol | 53.32 | 60.37 |
| TraesCS6D01G386900.1 | Wheat | extracellular, plasma membrane | 51.99 | 58.67 |
| TraesCS6D01G386700.1 | Wheat | cytosol | 51.71 | 58.41 |
| TraesCS6D01G399200.1 | Wheat | cytosol | 28.65 | 57.63 |
| TraesCS5D01G557600.2 | Wheat | cytosol | 49.34 | 55.56 |
| Zm00001d007688_P002 | Maize | cytosol | 20.97 | 52.74 |
| Os08t0372700-00 | Rice | nucleus | 45.16 | 52.37 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 45.07 | 51.69 |
| TraesCS6D01G399500.1 | Wheat | plastid | 41.18 | 47.74 |
| TraesCS2D01G545300.1 | Wheat | cytosol | 37.19 | 45.96 |
| TraesCS5D01G032300.1 | Wheat | cytosol | 36.43 | 45.28 |
| TraesCS7D01G412600.1 | Wheat | extracellular | 18.6 | 43.65 |
| TraesCS7D01G409800.1 | Wheat | cytosol | 36.91 | 43.56 |
| TraesCS6D01G076600.1 | Wheat | cytosol | 45.16 | 43.23 |
| TraesCS5D01G086400.1 | Wheat | cytosol | 21.54 | 40.46 |
| TraesCS7D01G540600.1 | Wheat | cytosol | 18.41 | 38.8 |
| TraesCS3D01G485300.2 | Wheat | endoplasmic reticulum | 34.16 | 38.42 |
| TraesCS3D01G076100.1 | Wheat | cytosol | 34.63 | 38.34 |
| TraesCS7D01G486400.1 | Wheat | cytosol | 33.49 | 38.24 |
| TraesCS6D01G369800.1 | Wheat | cytosol, plasma membrane | 19.07 | 38.0 |
| TraesCS5D01G098700.1 | Wheat | cytosol | 34.16 | 37.89 |
| TraesCS5D01G098500.1 | Wheat | cytosol, peroxisome, plasma membrane | 34.44 | 37.89 |
| TraesCS1D01G090600.1 | Wheat | cytosol | 34.91 | 37.74 |
| TraesCS6D01G372900.1 | Wheat | cytosol | 13.28 | 37.74 |
| TraesCS5D01G548400.1 | Wheat | cytosol | 33.68 | 37.61 |
| TraesCS5D01G390500.1 | Wheat | cytosol | 33.59 | 37.58 |
| TraesCS5D01G554600.1 | Wheat | cytosol | 33.3 | 37.22 |
| TraesCS1D01G037400.1 | Wheat | golgi, peroxisome | 33.78 | 36.97 |
| KXG21363 | Sorghum | cytosol | 41.18 | 36.9 |
| TraesCS5D01G098800.2 | Wheat | plastid | 31.88 | 36.84 |
| TraesCS5D01G557700.1 | Wheat | cytosol | 32.92 | 36.56 |
| TraesCS5D01G557500.1 | Wheat | cytosol | 32.73 | 36.51 |
| TraesCS1D01G416300.1 | Wheat | cytosol | 11.67 | 36.5 |
| TraesCS1D01G037500.1 | Wheat | cytosol, extracellular | 33.02 | 36.48 |
| TraesCS6D01G372800.1 | Wheat | extracellular, plasma membrane | 32.83 | 36.34 |
| TraesCS5D01G548200.1 | Wheat | endoplasmic reticulum | 32.64 | 36.21 |
| TraesCS5D01G546600.1 | Wheat | cytosol, golgi, plastid | 31.88 | 35.94 |
| TraesCS5D01G547200.1 | Wheat | plastid | 31.97 | 35.81 |
| TraesCS5D01G548600.1 | Wheat | extracellular, plasma membrane | 33.3 | 35.6 |
| TraesCS5D01G548300.1 | Wheat | cytosol | 31.88 | 35.41 |
| TraesCS7D01G479800.2 | Wheat | cytosol | 26.66 | 34.99 |
| TraesCS5D01G547800.1 | Wheat | cytosol | 26.28 | 34.76 |
| TraesCS7D01G540500.1 | Wheat | cytosol | 32.07 | 34.21 |
| TraesCS7D01G116500.1 | Wheat | golgi | 31.97 | 34.01 |
| TraesCS1D01G019600.1 | Wheat | cytosol | 16.6 | 33.91 |
| TraesCS6D01G373000.2 | Wheat | cytosol, mitochondrion | 32.16 | 33.53 |
| TraesCS7D01G201200.1 | Wheat | cytosol | 8.82 | 33.21 |
| TraesCS2D01G487900.1 | Wheat | extracellular, nucleus, peroxisome | 30.27 | 32.09 |
| TraesCS7D01G540000.1 | Wheat | mitochondrion | 5.98 | 31.98 |
| TraesCS2D01G585700.1 | Wheat | cytosol | 26.09 | 31.65 |
| TraesCS7D01G479900.1 | Wheat | cytosol | 14.23 | 31.51 |
| TraesCS1D01G045300.1 | Wheat | cytosol | 13.57 | 31.5 |
| TraesCS6D01G399100.1 | Wheat | plasma membrane | 54.36 | 28.87 |
| TraesCS1D01G416200.1 | Wheat | cytosol | 12.14 | 28.19 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF9 | InterPro:RX-like_CC | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G398700 | EnsemblPlants:TraesCS6D01G398700.1 | TIGR:cd14798 | SEG:seg |
Description
No Description!
Coordinates
chr6D:-:469787646..469791867
Molecular Weight (calculated)
118899.0 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.253
Length
1054 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAMEVALVSV ATGVLKPVIA KLFVLLGNEY KRFKSVRKEI KSLAHELAAM DAFLLKMSEA EDPDVRDKVW MNEVRELSYD LDDAIDDFMQ SIGDKDEKPD
0101: GFIEKIKSSL GKLGKMKARR RIGREIQDLK KQIVEAGNTN ARYNCRQTVN NTQNDTVNPR AVAIFEHASK LVGIDGPKAE IIKLLAQEDG RASTQQQRKI
0201: VSIVGSGGMG KTTLAKQVYE ELKGKFERHA FISVSRNPDI INILRAILSE LSGQGNADTI AWSIEQMICK ITNFLGDKRY IIVVDDLWDV KTWNDLKCAF
0301: PVTSFGSIII TTTRINEVAD SCLSSCHGHI YNIRHLDMVH SRELFNIRLF DSSENCPSHL EKVSGEILEK CVGLPLAIIS ISGLLATKER TENQWNQVKD
0401: SIGRALERNP SVEGMMKILS LSYFDLPSHL KTCLLYLSIF PEDSIIEKKA LIWRWIAEGF IQKDGKYTSY QLGERCFNEL LNRCLIQVAW TEEYGKVESC
0501: RVHDVILDFI ISKAIEENFV TFVGVPCITS GIQRKVRRLS LQVDVKEHSI LKKGLVLSHV RSVNVFGYTV EIPSLDEFRY LRVLDFELCR QVENQHLANI
0601: GNLFQLRHLN LSWTEVSELP EEIGRLHCLE MLDIRGTKVH ELPATIVNLK KLVDLLVDTR VKFPNGIAKM QAMEMLEQVG VFRQQFNFLQ ELGQLQNMRK
0701: LALDFEGDHV TVDGMGEGEC NEAIASSLRN LEDLISLTVH GGSVLQQGPV CSLPRSIQEL FMTQSSHLRR VPKWVSSLVN LQQLHLQVEE FEQEDLCILG
0801: SLPGLLILEL TMENIDSRLT ITREAGFRCL RKFSFGVVRW MMFEAGSMPR LETLELRIWS GEESDVDHTD SHTASVGDFD FGIGNLPCLV TLKYATHGCD
0901: DCNAAAKASM ERAAGTYPNC PSPLFQKLDM THTTRDCHLR RREREEREEC DARRREARLR EREEWEALQG TLRNLSTLSS PTKRFGGQSP WTRSPRPSGR
1001: TTPQINVDST SGLPARTASS RMNDGSDGAL LLQPHAPSAT TMNPSTTSFS NVST
0101: GFIEKIKSSL GKLGKMKARR RIGREIQDLK KQIVEAGNTN ARYNCRQTVN NTQNDTVNPR AVAIFEHASK LVGIDGPKAE IIKLLAQEDG RASTQQQRKI
0201: VSIVGSGGMG KTTLAKQVYE ELKGKFERHA FISVSRNPDI INILRAILSE LSGQGNADTI AWSIEQMICK ITNFLGDKRY IIVVDDLWDV KTWNDLKCAF
0301: PVTSFGSIII TTTRINEVAD SCLSSCHGHI YNIRHLDMVH SRELFNIRLF DSSENCPSHL EKVSGEILEK CVGLPLAIIS ISGLLATKER TENQWNQVKD
0401: SIGRALERNP SVEGMMKILS LSYFDLPSHL KTCLLYLSIF PEDSIIEKKA LIWRWIAEGF IQKDGKYTSY QLGERCFNEL LNRCLIQVAW TEEYGKVESC
0501: RVHDVILDFI ISKAIEENFV TFVGVPCITS GIQRKVRRLS LQVDVKEHSI LKKGLVLSHV RSVNVFGYTV EIPSLDEFRY LRVLDFELCR QVENQHLANI
0601: GNLFQLRHLN LSWTEVSELP EEIGRLHCLE MLDIRGTKVH ELPATIVNLK KLVDLLVDTR VKFPNGIAKM QAMEMLEQVG VFRQQFNFLQ ELGQLQNMRK
0701: LALDFEGDHV TVDGMGEGEC NEAIASSLRN LEDLISLTVH GGSVLQQGPV CSLPRSIQEL FMTQSSHLRR VPKWVSSLVN LQQLHLQVEE FEQEDLCILG
0801: SLPGLLILEL TMENIDSRLT ITREAGFRCL RKFSFGVVRW MMFEAGSMPR LETLELRIWS GEESDVDHTD SHTASVGDFD FGIGNLPCLV TLKYATHGCD
0901: DCNAAAKASM ERAAGTYPNC PSPLFQKLDM THTTRDCHLR RREREEREEC DARRREARLR EREEWEALQG TLRNLSTLSS PTKRFGGQSP WTRSPRPSGR
1001: TTPQINVDST SGLPARTASS RMNDGSDGAL LLQPHAPSAT TMNPSTTSFS NVST
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.