Factsheet for TraesCS5D01G546600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, golgi, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G540500.1	Wheat	cytosol	86.74	85.64
TraesCS4A01G327300.1	Wheat	cytosol	69.73	83.91
TraesCS5D01G548300.1	Wheat	cytosol	84.6	83.35
TraesCS5D01G547800.1	Wheat	cytosol	61.28	71.89
TraesCS6D01G372900.1	Wheat	cytosol	26.63	67.12
TraesCS7D01G201200.1	Wheat	cytosol	18.93	63.21
TraesCS5D01G554600.1	Wheat	cytosol	62.99	62.46
TraesCS5D01G557500.1	Wheat	cytosol	62.25	61.59
TraesCS5D01G557700.1	Wheat	cytosol	62.25	61.33
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	62.25	61.26
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	62.14	61.03
TraesCS5D01G547200.1	Wheat	plastid	61.39	61.0
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	61.93	60.69
TraesCS5D01G548400.1	Wheat	cytosol	61.18	60.59
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	61.82	60.02
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	61.5	58.32
Os10t0132700-01	Rice	cytosol	17.33	57.65
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	61.07	56.48
TraesCS7D01G412600.1	Wheat	extracellular	21.93	45.66
TraesCS5D01G086400.1	Wheat	cytosol	27.27	45.45
TraesCS1D01G416300.1	Wheat	cytosol	15.72	43.62
TraesCS6D01G399700.1	Wheat	cytosol	2.78	41.27
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	41.18	41.09
TraesCS7D01G540600.1	Wheat	cytosol	21.93	41.0
TraesCS5D01G098700.1	Wheat	cytosol	41.07	40.42
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	41.28	40.29
TraesCS6D01G399400.1	Wheat	cytosol	38.82	39.89
TraesCS7D01G479800.2	Wheat	cytosol	34.22	39.85
TraesCS5D01G390500.1	Wheat	cytosol	39.47	39.17
TraesCS5D01G098800.2	Wheat	plastid	38.07	39.04
TraesCS7D01G486400.1	Wheat	cytosol	38.4	38.89
TraesCS6D01G399200.1	Wheat	cytosol	21.5	38.36
Os10t0133000-00	Rice	cytosol	6.95	38.01
TraesCS5D01G492200.1	Wheat	cytosol	37.54	37.62
TraesCS5D01G557600.2	Wheat	cytosol	37.65	37.61
TraesCS6D01G386700.1	Wheat	cytosol	37.33	37.41
TraesCS7D01G086700.2	Wheat	cytosol	36.9	37.06
TraesCS7D01G409800.1	Wheat	cytosol	35.19	36.84
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	36.04	36.08
TraesCS7D01G116500.1	Wheat	golgi	38.18	36.02
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	37.97	35.71
TraesCS6D01G399500.1	Wheat	plastid	34.44	35.42
TraesCS3D01G076100.1	Wheat	cytosol	36.04	35.4
TraesCS2D01G545300.1	Wheat	cytosol	31.87	34.94
TraesCS2D01G585700.1	Wheat	cytosol	32.19	34.64
TraesCS7D01G540500.1	Wheat	cytosol	36.36	34.41
TraesCS1D01G090600.1	Wheat	cytosol	35.72	34.26
TraesCS7D01G540000.1	Wheat	mitochondrion	7.17	34.01
TraesCS7D01G479900.1	Wheat	cytosol	17.22	33.82
TraesCS5D01G032300.1	Wheat	cytosol	30.16	33.25
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	18.4	32.51
TraesCS1D01G019600.1	Wheat	cytosol	17.86	32.36
TraesCS6D01G398700.1	Wheat	plasma membrane	35.94	31.88
TraesCS1D01G045300.1	Wheat	cytosol	15.29	31.5
TraesCS1D01G416200.1	Wheat	cytosol	14.22	29.3
TraesCS6D01G076600.1	Wheat	cytosol	34.33	29.16
TraesCS6D01G399100.1	Wheat	plasma membrane	36.9	17.38

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G546600	EnsemblPlants:TraesCS5D01G546600.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr5D:-:555068318..555071582

Molecular Weight (calculated)

105300.0 Da

IEP (calculated)

7.021

GRAVY (calculated)

-0.156

Length

935 amino acids

Sequence
(BLAST)

001: MSVVSATHGV LGPLLRKLAD LLAGKFGCVR GVRKDILSLQ AELTSMHAAL QEYTMLEDPG VQVKAWISLL RELAYDTEDC IDKFIRHLGK YGRRGGFKEF
101: FRSTALLLKT LDSRCGIADQ IEELKARIKH VKELKDSYKL SETACRKTEH AAVDPRLCAL FAEEAHLVGV EGLRDDLVKW MLKEEANSST KDPKVLSIVG
201: FGGLGKTTLA NEVYRKIEGH FDCRAFVSVS QKPVIKNIIK DLIYKVPCPD EFRKDIEIWD EATSIAKLRE LLKDKRYLVV VDDIWSTQAW SNIKCAFPDN
301: NCSSRIITTT RIIDVARSCC PGSDDRVYEM AALGDLHSER LFLRRIFGSE DNCPNMLKES SNEILKKCGG LPLAIVSISS LLANRPAVKE EWEKIRRSIG
401: SALQNNQSLE GMSKILLLSY NDLPPNLKTC LLYLSVFPED YVIDRKRLVR RWIAEGFIPE ERGQSRQEVA ERYFYELVNK SMVQPEDVGY DGKARACRVH
501: DMMLEIIISK SNEDNFIVVL GGGQTSLENR QGFIRRLSIQ HIDHELAHLL AQEDLSHVRS LTVTSSACIK HLPSLAKFEA LRVVDFEGCE GLEEYDMKSI
601: GKLLQLKYLN LRCTSISKLP SEIMMLRDLE TLDFGETVVE DLPTGFAQLT KLQHLIAGGW TIIPKKIGNM RNLREISGFS ITKSPANAME DLGNLSALEE
701: IAIYLYGGES DDFKRHEEML LSSLCKLGSR KLRSLRIIGD DGSLEFLGSW SPLPICLIVF YMEISFYFTK VPEWIAPALS SLSFLDINLA ELTEEGMHTL
801: GELPALLCLK LWFKKRSDDR VIVRGFPILK QFTIDSNYAS ANVTFVKGAM PKLKELGLLI NVSVGKTYGF YLGIEHLTCL KEATARLDNR GATPSESKAA
901: EAAIRAEAGA HPNHPRITFW RKYWRNEDIG GTDEN

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.