Factsheet for TraesCS2D01G545300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G574400.1	Wheat	cytosol	75.03	95.67
TraesCS5D01G032300.1	Wheat	cytosol	57.8	58.14
TraesCS6D01G399700.1	Wheat	cytosol	3.75	50.79
TraesCS6D01G399200.1	Wheat	cytosol	27.2	44.27
TraesCS5D01G492200.1	Wheat	cytosol	47.13	43.09
TraesCS6D01G399400.1	Wheat	cytosol	45.6	42.75
TraesCS7D01G086700.2	Wheat	cytosol	46.54	42.64
TraesCS6D01G386700.1	Wheat	cytosol	46.54	42.55
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	46.54	42.51
TraesCS7D01G412600.1	Wheat	extracellular	21.81	41.43
TraesCS7D01G409800.1	Wheat	cytosol	43.14	41.21
TraesCS5D01G557600.2	Wheat	cytosol	44.78	40.81
TraesCS5D01G086400.1	Wheat	cytosol	26.26	39.93
TraesCS6D01G372900.1	Wheat	cytosol	16.3	37.47
TraesCS6D01G398700.1	Wheat	plasma membrane	45.96	37.19
TraesCS6D01G399500.1	Wheat	plastid	39.16	36.74
TraesCS1D01G416300.1	Wheat	cytosol	14.3	36.2
TraesCS7D01G540600.1	Wheat	cytosol	20.98	35.8
TraesCS7D01G201200.1	Wheat	cytosol	11.25	34.29
TraesCS5D01G098700.1	Wheat	cytosol	37.98	34.11
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	21.1	34.03
TraesCS3D01G076100.1	Wheat	cytosol	37.87	33.93
TraesCS7D01G486400.1	Wheat	cytosol	36.23	33.48
TraesCS5D01G390500.1	Wheat	cytosol	36.81	33.33
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	36.46	33.19
TraesCS5D01G557700.1	Wheat	cytosol	36.58	32.88
TraesCS5D01G557500.1	Wheat	cytosol	36.34	32.8
TraesCS5D01G098800.2	Wheat	plastid	35.05	32.79
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	36.81	32.61
KXG21363	Sorghum	cytosol	44.9	32.57
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	36.58	32.57
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	35.64	32.0
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	34.94	31.87
TraesCS5D01G548400.1	Wheat	cytosol	35.17	31.78
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	36.69	31.74
TraesCS5D01G548300.1	Wheat	cytosol	35.29	31.72
TraesCS5D01G554600.1	Wheat	cytosol	35.05	31.71
TraesCS5D01G547200.1	Wheat	plastid	34.82	31.56
TraesCS6D01G076600.1	Wheat	cytosol	40.56	31.43
TraesCS1D01G090600.1	Wheat	cytosol	35.87	31.38
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	34.82	31.13
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	34.35	30.78
TraesCS7D01G479800.2	Wheat	cytosol	28.96	30.76
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	34.94	29.98
TraesCS5D01G547800.1	Wheat	cytosol	27.78	29.74
TraesCS2D01G585700.1	Wheat	cytosol	29.43	28.88
TraesCS7D01G540500.1	Wheat	cytosol	33.29	28.74
TraesCS7D01G116500.1	Wheat	golgi	33.29	28.66
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	33.06	27.89
TraesCS7D01G540000.1	Wheat	mitochondrion	6.33	27.41
TraesCS1D01G045300.1	Wheat	cytosol	14.3	26.87
TraesCS1D01G019600.1	Wheat	cytosol	16.06	26.55
TraesCS7D01G479900.1	Wheat	cytosol	14.19	25.42
TraesCS1D01G416200.1	Wheat	cytosol	12.07	22.69
TraesCS6D01G399100.1	Wheat	plasma membrane	45.96	19.75

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	InterPro:RX-like_CC
SUPFAM:SSF52047	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2D01G545300	EnsemblPlants:TraesCS2D01G545300.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr2D:-:621964401..621967583

Molecular Weight (calculated)

96676.7 Da

IEP (calculated)

6.330

GRAVY (calculated)

-0.241

Length

853 amino acids

Sequence
(BLAST)

001: MEDAVVSAAT GAMGPVMGKL VALLGDEYRR LRSIHTEIKT LTRELETIDA FLENMAEAEE PNPQDKAWMK EVRELSYDVE DNLDEFMARV VADKSSKPEG
101: LVDNIKIKLK RLKARHEIAK AIEDLKKHAI EVSQRNKRYR DHAISNTSRS PKIVDPRALA IFEDVSKLVG VDGPKKELLQ RLADDQQQTK LVAIVGFGGL
201: GKTTIANQVY QELKGQFEYR AFLSVSRNPD IVNVMSNIYG QLNHGYSGGG TENLQTLIAK ILEFLQNKRY LIVVDDIWKV DDWNAIKCAF PRTSPGSKII
301: STTRINDVAE SCCSSFSGHI YNLRPLNMMQ SRQLLYTRLF NSEEKCPSDL KEIADQILQK CDGLPLAIVA ISGVLAHKAS KKDKWNQVKD SIGRALRNSS
401: VEAMVNIIAL SYLDLPRHLK TCLLYLSIFP EDHIIEKENL IKRWVGEGFI CKESSRTMYE SGEIYFNDLI NRSLIQPTGI DGKCSEVKSC RVHDTVHDFI
501: VSKAVDENFV TVIGVPGVNH DPQMKVRRLS LQNNGEIPAC LIVSNARSLH VFGRNAKIPS VSQFGLLRVM DFEDCWQLKD YDLAGIGNLL HLKYLRLKHT
601: GALKALPEEL ARLQELQIDI DGSVYEMEFP EAFQRLVCNV ALYLNGHNKV PDETASVQRL RVLEGLSVYL QSVEFLKGLG QLKNLRRLGM VLIYYHCGRD
701: WEANLKQAQS SVCELGKAGL ESLHLYIDEE VVEIFEMDSW FSVPPYALRE LVIEGKSVTR VPTWMASLDN LEKLHLRIYK MPEEEVKILG GLPSLRHLCI
801: EWADFDYDGM FDDPPMEVVE AAVRKAMEDH PNRPTLVWTT EWDPLPSFLQ LRS

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.