Factsheet for TraesCS5D01G548300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G541500.1	Wheat	cytosol	94.94	95.14
TraesCS4A01G327300.1	Wheat	cytosol	71.65	87.52
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	83.35	84.6
TraesCS5D01G547800.1	Wheat	cytosol	60.48	72.02
TraesCS6D01G372900.1	Wheat	cytosol	26.24	67.12
TraesCS5D01G554600.1	Wheat	cytosol	64.91	65.32
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	64.38	64.32
TraesCS5D01G557500.1	Wheat	cytosol	63.86	64.13
TraesCS7D01G201200.1	Wheat	cytosol	18.86	63.93
TraesCS5D01G557700.1	Wheat	cytosol	63.75	63.75
TraesCS5D01G547200.1	Wheat	plastid	62.49	63.02
TraesCS5D01G548400.1	Wheat	cytosol	62.07	62.39
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	62.17	61.97
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	61.64	61.32
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	61.54	60.64
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	61.64	59.33
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	60.7	56.97
Os10t0132700-01	Rice	cytosol	16.86	56.94
TraesCS7D01G412600.1	Wheat	extracellular	22.02	46.55
TraesCS6D01G399700.1	Wheat	cytosol	3.06	46.03
TraesCS5D01G086400.1	Wheat	cytosol	26.55	44.92
TraesCS1D01G416300.1	Wheat	cytosol	15.28	43.03
TraesCS5D01G098700.1	Wheat	cytosol	41.41	41.37
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	41.73	41.34
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	40.67	41.2
TraesCS5D01G390500.1	Wheat	cytosol	40.36	40.66
TraesCS7D01G540600.1	Wheat	cytosol	21.39	40.6
TraesCS7D01G486400.1	Wheat	cytosol	39.2	40.3
TraesCS5D01G098800.2	Wheat	plastid	38.46	40.02
TraesCS6D01G399400.1	Wheat	cytosol	37.83	39.45
Os10t0133000-00	Rice	cytosol	7.06	39.18
TraesCS7D01G479800.2	Wheat	cytosol	33.09	39.1
TraesCS5D01G557600.2	Wheat	cytosol	37.09	37.61
TraesCS6D01G399200.1	Wheat	cytosol	20.76	37.6
TraesCS5D01G492200.1	Wheat	cytosol	36.88	37.51
TraesCS7D01G086700.2	Wheat	cytosol	36.35	37.06
TraesCS7D01G116500.1	Wheat	golgi	38.67	37.03
TraesCS6D01G386700.1	Wheat	cytosol	36.35	36.98
TraesCS7D01G409800.1	Wheat	cytosol	34.56	36.73
TraesCS3D01G076100.1	Wheat	cytosol	36.67	36.55
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	37.72	36.02
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	35.3	35.87
TraesCS2D01G545300.1	Wheat	cytosol	31.72	35.29
TraesCS2D01G585700.1	Wheat	cytosol	31.93	34.87
TraesCS6D01G399500.1	Wheat	plastid	33.19	34.65
TraesCS7D01G540500.1	Wheat	cytosol	36.04	34.62
TraesCS1D01G090600.1	Wheat	cytosol	35.41	34.46
TraesCS5D01G032300.1	Wheat	cytosol	30.45	34.08
TraesCS7D01G479900.1	Wheat	cytosol	16.86	33.61
TraesCS1D01G019600.1	Wheat	cytosol	18.02	33.14
TraesCS7D01G540000.1	Wheat	mitochondrion	6.74	32.49
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.91	32.14
TraesCS6D01G398700.1	Wheat	plasma membrane	35.41	31.88
TraesCS1D01G045300.1	Wheat	cytosol	14.65	30.62
TraesCS1D01G416200.1	Wheat	cytosol	14.65	30.62
TraesCS6D01G076600.1	Wheat	cytosol	33.3	28.7
TraesCS6D01G399100.1	Wheat	plasma membrane	36.04	17.23

Protein Annotations

EnsemblPlants:TraesCS5D01G548300.1	EnsemblPlantsGene:TraesCS5D01G548300	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:555928736..555931953

Molecular Weight (calculated)

106470.0 Da

IEP (calculated)

5.961

GRAVY (calculated)

-0.197

Length

949 amino acids

Sequence
(BLAST)

001: MEVAVSASHG VMGPLLGKLA DLLAGKYGRI RGVRGEILSL QVELTSMHAA LKNYTMLEDP DVEVMTWISL LRELAYDTED CIDKFIRRLG KRGRRGGFKE
101: LLRDTTRFLK SLDSRCGIAD QIDELKARIK HVKEVKDCYK LSEIPCSKTE HAAVDPRLCA LFAEEAHLVG VEGPRDDLVK WMLKEENSST KDRKVLSIVG
201: FGGLGKTTLA NEVYRKIQGH FDCQVFVSVS QKPYIKNIIK DVISQVPCQD GSTKDTSDWD EKKSIAKLRE LLQDKRYLVI VDDIWSTQAW NNIKCAFPYN
301: NCSSRIITTT RIIDVARSCC PGSDDRVYEM TALSDLHSKR LFLKRIFGSE DHCPDMLKES SNEILKKCGG LPLAIISISS LLANRPVVKE EWEKIRRSIG
401: SALENNQSLE GMSKILLLSY NDLPPNLKTC LLYLSVFPED YVIDRERLVR RWIAEGFISE ERGQSQQEVA EIYFYELVNK SMVQPEDIGY DGKARACRVH
501: DMMLEIIISK SNEDNFIVVI GGGQTTLANR QGFIRRLSIQ QIDVELVHLL AQEDLSHVRS LTVTCSACVK HLPSLAKFEA LRVLDFQGCE GLEEYDMKSI
601: GKLLQLKYLN FPATRISKLP SEIVLLRDLE TLHFGATPVE ELPIGFAQLT KLQHLIAGGW TIIPKKIGNM RNLREISGFS ITGSPADAVE DLGSLPGLEE
701: IDIYLDGGES DEFRRHEEML LSSLCKLGSC KLRSLRIRGN DGSLEFLGSW SPLPFTLQEF YMVGDYCFTK VPECIAPALT SLSFLDINLA ELTEEGLVTL
801: GELPALLHLV LWFRTRPDDR VIVRGFPSLK QFTIYSNDAS AYVTFVKGSM PKLKKLDLLI NVSTAKTYGF HLGIEHLTCL KQATARLDNR GATPSERKAA
901: EAVIRVEAGA HPNHPAVTIC DEYQCSEEDS EDICGDEKKS KEDGGTDEN

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.