Factsheet for TraesCS7D01G540000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	secretory
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G399700.1	Wheat	cytosol	13.2	41.27
TraesCS7D01G540600.1	Wheat	cytosol	59.9	23.6
HORVU7Hr1G121200.2	Barley	plastid	60.41	22.2
TraesCS7D01G201200.1	Wheat	cytosol	30.96	21.79
TraesCS7D01G540500.1	Wheat	cytosol	89.34	17.81
TraesCS1D01G416300.1	Wheat	cytosol	28.93	16.91
TraesCS7D01G412600.1	Wheat	extracellular	32.49	14.25
TraesCS7B01G477700.2	Wheat	cytosol	70.56	13.84
TraesCS6D01G372900.1	Wheat	cytosol	23.86	12.67
TraesCS7A01G553600.1	Wheat	nucleus	47.72	10.82
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	53.81	10.66
TraesCS5D01G086400.1	Wheat	cytosol	29.44	10.34
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	39.59	8.32
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	40.1	8.25
TraesCS7D01G479800.2	Wheat	cytosol	33.5	8.22
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	38.58	7.89
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	37.06	7.67
TraesCS3D01G076100.1	Wheat	cytosol	36.55	7.56
TraesCS1D01G090600.1	Wheat	cytosol	36.04	7.28
Os11t0265900-02	Rice	cytosol	34.01	7.25
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	35.03	7.23
TraesCS5D01G390500.1	Wheat	cytosol	34.52	7.22
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	34.01	7.17
TraesCS5D01G098700.1	Wheat	cytosol	34.52	7.16
TraesCS6D01G399500.1	Wheat	plastid	32.99	7.15
TraesCS7D01G086700.2	Wheat	cytosol	33.5	7.09
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	36.04	7.02
TraesCS5D01G557500.1	Wheat	cytosol	33.5	6.98
TraesCS5D01G548400.1	Wheat	cytosol	32.99	6.89
TraesCS5D01G557700.1	Wheat	cytosol	32.99	6.85
TraesCS5D01G547200.1	Wheat	plastid	32.49	6.8
TraesCS5D01G554600.1	Wheat	cytosol	32.49	6.79
TraesCS5D01G548300.1	Wheat	cytosol	32.49	6.74
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	32.49	6.74
TraesCS7D01G486400.1	Wheat	cytosol	31.47	6.72
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	31.47	6.64
TraesCS6D01G386700.1	Wheat	cytosol	30.96	6.54
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	32.49	6.49
TraesCS6D01G399400.1	Wheat	cytosol	29.95	6.48
TraesCS5D01G492200.1	Wheat	cytosol	30.46	6.43
TraesCS2D01G545300.1	Wheat	cytosol	27.41	6.33
TraesCS7D01G116500.1	Wheat	golgi	31.47	6.26
TraesCS5D01G557600.2	Wheat	cytosol	29.44	6.2
TraesCS6D01G398700.1	Wheat	plasma membrane	31.98	5.98
TraesCS5D01G032300.1	Wheat	cytosol	23.86	5.54
TraesCS7D01G409800.1	Wheat	cytosol	24.87	5.49
TraesCS6D01G076600.1	Wheat	cytosol	29.44	5.27
TraesCS5D01G098800.2	Wheat	plastid	19.29	4.17
TraesCS2D01G585700.1	Wheat	cytosol	14.72	3.34
TraesCS6D01G399100.1	Wheat	plasma membrane	30.96	3.07
TraesCS7D01G479900.1	Wheat	cytosol	6.09	2.52
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	3.55	1.32
TraesCS6D01G399200.1	Wheat	cytosol	3.05	1.15
TraesCS1D01G045300.1	Wheat	cytosol	2.03	0.88
TraesCS1D01G019600.1	Wheat	cytosol	2.03	0.78
HORVU7Hr1G121190.1	Barley	cytosol	1.52	0.64
TraesCS5D01G547800.1	Wheat	cytosol	2.54	0.63
TraesCS1D01G416200.1	Wheat	cytosol	1.02	0.44

Protein Annotations

EnsemblPlants:TraesCS7D01G540000.1	EnsemblPlantsGene:TraesCS7D01G540000	InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF4
SEG:seg	TIGR:cd14798	TMHMM:TMhelix	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7D:+:630272854..630273447

Molecular Weight (calculated)

22464.7 Da

IEP (calculated)

10.031

GRAVY (calculated)

-0.263

Length

197 amino acids

Sequence
(BLAST)

001: MVGLGVGVGT GALGSVIGKL ATLLGHEYTM LKRVRKDIAF LERELRRMQI LVDTLADMEE LDELAKDWKG TMRDLSYDME ECIHRFMLRL GNGDAKPRFR
101: KKTVRQLKTL FERHGIGSQI KELKARVEEE NRRRQRLNLD KYIVSPTRVV AIDPRLAAFH GVAKGLVAID GLRDQVISWL TEESEQLKVV GSIKCYL

Best Arabidopsis Sequence Match ( AT3G46710.1 )
(BLAST)

001: MVDAITEFVV GKIDNYLIEE APMLIGVKDD LEELKTELTC IQVYLKNVEV CDKEDEVSKE WTKLVLDIAY DVEDVLDTYF LKLEKRLHRL GLMRLTNIIS
101: DKKDAYNILD DIKTLKRRTL DVTRKLEMYG IGNFNEHRVV ASTSRVREVR RARSDDQEER VVGLTDDAKV LLTKLLDDDG DNKIYMISIF GMEGLGKTSL
201: ARKLFNSSDV KESFEYRVWT NVSGECNTRD ILMRIISSLE ETSEGELEKM AQQELEVYLH DILQEKRYLV VVDDIWESEA LESLKRALPC SYQGSRVIIT
301: TSIRVVAEGR DKRVYTHNIR FLTFKESWNL FEKKAFRYIL KVDQELQKIG KEMVQKCGGL PRTTVVLAGL MSRKKPNEWN DVWSSLRVKD DNIHVSSLFD
401: LSFKDMGHEL KLCFLYLSVF PEDYEVDVEK LIQLLVAEGF IQEDEEMTME DVARYYIEDL VYISLVEVVK RKKGKLMSFR IHDLVREFTI KKSKELNFVN
501: VYDEQHSSTT SRREVVHHLM DDNYLCDRRV NTQMRSFLFF GKRRNDITYV ETITLKLKLL RVLNLGGLHF ICQGYSPWSL PDVIGGLVHL RYLGIADTVV
601: NNLPDFISNL RFLQTLDASG NSFERMTDLS NLTSLRHLTG RFIGELLIGD AVNLQTLRSI SSYSWSKLKH ELLINLRDLE IYEFHILNDQ IKVPLDLVSL
701: SKLKNLRVLK IEVVSFSLFS EETVRFELLV KLTLHCDVRR LPRDMDLIFP SLESLTLVTN LQEDPMPTLQ KLQRLENLVL YSCVYPGAKM FINAQGFGRL
801: RKLKVIIKRL DELEIEEEAM PCLMKLNLDN KDGATKLMIP DRMRAFV

Arabidopsis Description

RPP13L2Putative disease resistance RPP13-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.