Factsheet for TraesCS5D01G547200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
plastid 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G541200.1	Wheat	plastid	33.37	90.23
TraesCS5D01G554600.1	Wheat	cytosol	69.71	69.57
TraesCS5D01G548400.1	Wheat	cytosol	68.44	68.22
TraesCS6D01G372900.1	Wheat	cytosol	25.93	65.77
TraesCS7D01G201200.1	Wheat	cytosol	19.23	64.64
TraesCS5D01G548300.1	Wheat	cytosol	63.02	62.49
TraesCS5D01G557500.1	Wheat	cytosol	62.49	62.22
TraesCS5D01G557700.1	Wheat	cytosol	62.49	61.96
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	62.27	61.68
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	61.0	61.39
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	61.42	60.59
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	63.02	60.14
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	59.72	59.03
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	60.36	58.98
TraesCS5D01G547800.1	Wheat	cytosol	47.61	56.21
Os10t0132700-01	Rice	cytosol	16.68	55.87
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	59.3	55.19
TraesCS7D01G412600.1	Wheat	extracellular	22.21	46.55
TraesCS6D01G399700.1	Wheat	cytosol	3.08	46.03
TraesCS1D01G416300.1	Wheat	cytosol	15.62	43.62
TraesCS5D01G086400.1	Wheat	cytosol	25.4	42.6
TraesCS7D01G540600.1	Wheat	cytosol	22.0	41.4
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	40.49	39.77
TraesCS7D01G479800.2	Wheat	cytosol	33.58	39.35
TraesCS5D01G098700.1	Wheat	cytosol	39.53	39.16
TraesCS5D01G390500.1	Wheat	cytosol	39.0	38.96
TraesCS6D01G399400.1	Wheat	cytosol	37.51	38.79
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	38.47	38.63
TraesCS7D01G486400.1	Wheat	cytosol	37.73	38.46
TraesCS5D01G098800.2	Wheat	plastid	36.98	38.16
TraesCS5D01G492200.1	Wheat	cytosol	37.19	37.51
TraesCS5D01G557600.2	Wheat	cytosol	36.77	36.97
TraesCS6D01G386700.1	Wheat	cytosol	36.45	36.76
TraesCS7D01G086700.2	Wheat	cytosol	35.92	36.3
TraesCS6D01G399200.1	Wheat	cytosol	20.19	36.26
TraesCS7D01G409800.1	Wheat	cytosol	33.9	35.72
TraesCS7D01G116500.1	Wheat	golgi	37.62	35.72
TraesCS3D01G076100.1	Wheat	cytosol	36.13	35.71
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	35.39	35.65
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	37.3	35.31
TraesCS2D01G545300.1	Wheat	cytosol	31.56	34.82
TraesCS6D01G399500.1	Wheat	plastid	33.58	34.76
TraesCS5D01G032300.1	Wheat	cytosol	31.14	34.55
TraesCS2D01G585700.1	Wheat	cytosol	31.67	34.29
TraesCS7D01G540500.1	Wheat	cytosol	35.81	34.11
Os10t0133000-00	Rice	cytosol	6.16	33.92
TraesCS1D01G090600.1	Wheat	cytosol	35.07	33.85
TraesCS7D01G479900.1	Wheat	cytosol	16.68	32.98
TraesCS7D01G540000.1	Wheat	mitochondrion	6.8	32.49
TraesCS6D01G398700.1	Wheat	plasma membrane	35.81	31.97
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.53	31.19
TraesCS1D01G019600.1	Wheat	cytosol	17.0	31.01
TraesCS1D01G045300.1	Wheat	cytosol	14.13	29.3
TraesCS6D01G076600.1	Wheat	cytosol	32.62	27.88
TraesCS1D01G416200.1	Wheat	cytosol	12.75	26.43
TraesCS6D01G399100.1	Wheat	plasma membrane	34.75	16.47

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G547200	EnsemblPlants:TraesCS5D01G547200.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr5D:-:555447038..555456627

Molecular Weight (calculated)

106505.0 Da

IEP (calculated)

7.666

GRAVY (calculated)

-0.253

Length

941 amino acids

Sequence
(BLAST)

001: MTPVVSASLG ASGPLLVKLG TLLANECGRL KGVRREIRSL KSELTCMHAA LTKYAMIEDP DVQVKAWMSL VRELAYDTED VFDKFIHQLG DSRYHGGFKE
101: FFRKTARRLK TLGSRRGIAN QIDDLKTRIK KVQELKDSYK LNDAPSSTMD HIAMDPRLQA IFAEEAHIVG LEGPRNDLAK WMVEEGNNSR HCKVLSIVGF
201: GGLGKTTLAN EVYRKIQRDF QCRAFISVSQ KPDIKKIIKD VISQVSCGDG ATKDTSDWDA SKFIAKLREL LQDKRYLIFI DDVWSTQAWN IIKCAFPENN
301: CSSRIIATTR IIDVAKACCP TTDDRMFEMK PLSDVNSRRL FFKRIFGSDD CCPNMLNEVS NEILKRCGGL PLAIISISAL LANRPAMKEE WEKVKRSIGS
401: ALENNQSLEG MSSILSLSYN DLQPHLKTCL LYLSVFPEDY VIDRNRLVRR WVSEGFISEE RGQSQQEVAE KYFYELINKS MVQAVDIGDD GKVNACRVHD
501: MMLEIIISKS VEDNFVTIVG GSQTSLTNHH GFIRRLSVQH IDQEAVSALA NEDLSHVRSL TVTSSSCLKH FPRLVEFEAL RVLDFEDCWD LEEYDMNNMD
601: KLLQLKYLSL GSADKSKQPR RTMVIDGVNC LDPRETQTEV LPTGIERLTK LQYLITRGYH CKVPNGIGNM SSLRVISTFD ITRSSVDAVE ELGNLTRLNE
701: LRLWLDFGDG YKRHYEVLLS LLCKFSSCKL QFLHINGTKG FINFIDFWSP PPSFLQIFYM SGQLLLSNIP RWITPGLKSL AHMCLSLNEL RGEDLHTLGE
801: LPSLVILSLC LETGVKGKLT VIGFPCLKRF LIFSSDGAYV TFTKGAMPKL EKHILSGDAS VMNTQGFYLG IEHLSCLKEI EIRNWKRGSS VTHQECDAAA
901: AVIKKEARAH PNRPKFNYIS SRYQRINDTD SDEEKSKEED N

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.