Factsheet for TraesCS7D01G540500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G540000.1	Wheat	mitochondrion	17.81	89.34
TraesCS7B01G477700.2	Wheat	cytosol	78.95	77.69
TraesCS7D01G540600.1	Wheat	cytosol	37.55	74.2
HORVU7Hr1G121200.2	Barley	plastid	36.64	67.54
HORVU7Hr1G121190.1	Barley	cytosol	31.68	66.31
TraesCS7A01G553600.1	Wheat	nucleus	58.3	66.28
TraesCS1D01G416300.1	Wheat	cytosol	21.56	63.2
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	55.97	55.63
TraesCS2D01G585700.1	Wheat	cytosol	47.98	54.55
TraesCS1D01G416200.1	Wheat	cytosol	21.46	46.7
TraesCS6D01G372900.1	Wheat	cytosol	16.19	43.13
TraesCS7D01G412600.1	Wheat	extracellular	19.53	42.98
TraesCS6D01G399700.1	Wheat	cytosol	2.63	41.27
TraesCS5D01G086400.1	Wheat	cytosol	22.57	39.75
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	37.65	39.7
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	38.36	39.56
TraesCS5D01G098700.1	Wheat	cytosol	37.96	39.47
TraesCS5D01G554600.1	Wheat	cytosol	37.15	38.92
TraesCS5D01G098800.2	Wheat	plastid	35.43	38.38
Os11t0265900-02	Rice	cytosol	35.83	38.31
TraesCS5D01G390500.1	Wheat	cytosol	36.03	37.79
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	36.74	37.69
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	35.83	37.18
TraesCS6D01G399200.1	Wheat	cytosol	19.43	36.64
TraesCS5D01G557500.1	Wheat	cytosol	34.92	36.51
TraesCS6D01G399400.1	Wheat	cytosol	33.6	36.48
TraesCS3D01G076100.1	Wheat	cytosol	35.12	36.45
TraesCS7D01G486400.1	Wheat	cytosol	34.01	36.4
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	34.41	36.36
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	35.02	36.27
TraesCS5D01G557700.1	Wheat	cytosol	34.82	36.25
TraesCS5D01G492200.1	Wheat	cytosol	34.11	36.12
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	34.72	36.11
TraesCS5D01G548300.1	Wheat	cytosol	34.62	36.04
TraesCS7D01G479800.2	Wheat	cytosol	29.25	35.99
TraesCS5D01G547200.1	Wheat	plastid	34.11	35.81
TraesCS5D01G548400.1	Wheat	cytosol	34.11	35.7
TraesCS7D01G086700.2	Wheat	cytosol	33.3	35.34
TraesCS7D01G116500.1	Wheat	golgi	35.43	35.32
TraesCS1D01G090600.1	Wheat	cytosol	34.82	35.28
TraesCS7D01G201200.1	Wheat	cytosol	9.82	34.64
TraesCS5D01G547800.1	Wheat	cytosol	27.94	34.63
TraesCS7D01G409800.1	Wheat	cytosol	31.28	34.6
TraesCS1D01G045300.1	Wheat	cytosol	15.89	34.58
TraesCS6D01G386700.1	Wheat	cytosol	32.59	34.51
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	32.39	34.26
TraesCS5D01G557600.2	Wheat	cytosol	32.39	34.19
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	34.11	34.18
TraesCS6D01G399500.1	Wheat	plastid	31.38	34.1
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	34.72	33.93
TraesCS2D01G545300.1	Wheat	cytosol	28.74	33.29
TraesCS5D01G032300.1	Wheat	cytosol	28.04	32.67
TraesCS6D01G398700.1	Wheat	plasma membrane	34.21	32.07
TraesCS7D01G479900.1	Wheat	cytosol	15.08	31.3
TraesCS1D01G019600.1	Wheat	cytosol	16.3	31.2
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	16.6	31.0
TraesCS6D01G076600.1	Wheat	cytosol	31.48	28.25
TraesCS6D01G399100.1	Wheat	plasma membrane	33.3	16.57

Protein Annotations

EnsemblPlants:TraesCS7D01G540500.1	EnsemblPlantsGene:TraesCS7D01G540500	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF16	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr7D:+:630502889..630506077

Molecular Weight (calculated)

112637.0 Da

IEP (calculated)

7.393

GRAVY (calculated)

-0.203

Length

988 amino acids

Sequence
(BLAST)

001: MVGLGVGVGT GALGSVIGKL ATLLGDEYMM LKKVRKDIAF LERELRRMQI LVDTLADMEE LDELAKDWKG TMRDLSYDME ECIDRFMLRL GNGDAKPRFR
101: KKTVRQLKTL FERHGIGTQI KELKARVEEE NQRRQRLNLD KYIVSPTRAV AIDPRLAAFH GITKGLVAID GRRDQVISWL TEESEELKVV AIVGGGGLGK
201: TTLAMETYRK IGGNYQCRAS VSVSRTPDLE KLLKDVLSQI DEAAFSKCQA ERWEKDQLVR QIRRILTGKR YFLVIDDVWK VQDWEFIKAA FPDNYNGSRI
301: IATTRIANVA KSCCSNSCGR LYQMLPLNDG DSRILFFKRI FDSESSFPPQ LEKVSARILK KCGGLPLAII TIASLLANKP QNADEWERLQ DSIGAGLSYE
401: SDDGGKGMAH ILLLSYWDLP HHLKTCLLYL CIYPEDAEIS CEELKWKWIA EGFITSKQGN LYQEAESCFN ELVNRSMIQI VDVDSFEEKY CQVHDMVLDL
501: IISRSTEENF ATVLNGVCNS LPTKMRRLSL QSSGLEQKGA IQAIIRSKLH VRSFNVFEET KDIPPLVDFL SLRVFDIYRD YSSWENKHIR NIGSFYQLRY
601: LRMSGLGITE LPADIGKLQN LETLDLRGSR IRRLPSTIAQ LQKLVRLLID NDDFVFSADM FGNMRALEEV SDIYKVDNPE KILEEFGHLT KLRKISMSRL
701: WGWWRVSFGN VKCYREALGS SLNKLGKYSL QYLHTNGDMG NIIFRDPCCT FPHLQDLKLV HDMERIPKGM ASLTNTVKLE IAVTQFDEEG LHILMGMPSL
801: AYLQLTVGFR GTMSPMTVSS NGFKLLEVFH FHCNISYGEV GIEFAAGAMT ALRRLHLSWR ARLVRLRSSD DVGMGIQHLS SLMQLQVETW CVGATLEEVE
901: ALEGPVEKAV TLHPNRQTLQ LHLHRKDEHL MFKDEEERKR GRPAGFFVPL AMLEENALEQ EDIIRFRALP FTTALQLISR ILIVDTLY

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.