Factsheet for TraesCS5D01G548200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G539700.1	Wheat	endoplasmic reticulum	89.37	91.29
TraesCS5B01G540800.1	Wheat	endoplasmic reticulum	90.63	88.67
TraesCS5D01G557700.1	Wheat	cytosol	75.47	75.55
TraesCS5D01G557500.1	Wheat	cytosol	73.05	73.44
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	67.37	64.91
TraesCS5D01G548300.1	Wheat	cytosol	64.32	64.38
TraesCS7D01G201200.1	Wheat	cytosol	18.95	64.29
TraesCS5D01G554600.1	Wheat	cytosol	63.79	64.26
TraesCS6D01G372900.1	Wheat	cytosol	25.05	64.15
TraesCS5D01G548400.1	Wheat	cytosol	62.42	62.82
TraesCS5D01G547200.1	Wheat	plastid	61.68	62.27
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	61.26	62.25
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	61.47	60.64
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	60.63	60.38
TraesCS5D01G547800.1	Wheat	cytosol	49.47	58.97
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	58.42	58.3
Os10t0132700-01	Rice	cytosol	16.84	56.94
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	59.16	55.59
TraesCS6D01G399700.1	Wheat	cytosol	3.26	49.21
TraesCS7D01G412600.1	Wheat	extracellular	23.16	49.0
TraesCS5D01G086400.1	Wheat	cytosol	25.37	42.96
TraesCS1D01G416300.1	Wheat	cytosol	15.05	42.43
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	41.58	41.23
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	40.32	40.88
TraesCS7D01G540600.1	Wheat	cytosol	21.37	40.6
TraesCS5D01G390500.1	Wheat	cytosol	40.11	40.45
TraesCS5D01G098700.1	Wheat	cytosol	40.32	40.32
TraesCS5D01G098800.2	Wheat	plastid	38.0	39.58
TraesCS7D01G479800.2	Wheat	cytosol	33.37	39.48
TraesCS7D01G486400.1	Wheat	cytosol	37.68	38.79
TraesCS6D01G399400.1	Wheat	cytosol	37.05	38.68
TraesCS6D01G399200.1	Wheat	cytosol	21.05	38.17
TraesCS5D01G492200.1	Wheat	cytosol	36.95	37.62
TraesCS6D01G386700.1	Wheat	cytosol	36.32	36.98
TraesCS7D01G086700.2	Wheat	cytosol	36.21	36.95
TraesCS7D01G409800.1	Wheat	cytosol	34.53	36.73
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	35.89	36.51
TraesCS3D01G076100.1	Wheat	cytosol	36.53	36.45
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	38.11	36.42
TraesCS5D01G557600.2	Wheat	cytosol	35.58	36.11
TraesCS5D01G032300.1	Wheat	cytosol	32.21	36.08
TraesCS7D01G116500.1	Wheat	golgi	37.58	36.02
TraesCS2D01G545300.1	Wheat	cytosol	32.0	35.64
TraesCS2D01G585700.1	Wheat	cytosol	32.53	35.56
TraesCS1D01G090600.1	Wheat	cytosol	36.21	35.28
Os10t0133000-00	Rice	cytosol	6.32	35.09
TraesCS6D01G399500.1	Wheat	plastid	33.47	34.98
TraesCS7D01G540500.1	Wheat	cytosol	36.11	34.72
TraesCS7D01G479900.1	Wheat	cytosol	16.42	32.77
TraesCS6D01G398700.1	Wheat	plasma membrane	36.21	32.64
TraesCS1D01G019600.1	Wheat	cytosol	17.68	32.56
TraesCS7D01G540000.1	Wheat	mitochondrion	6.74	32.49
TraesCS1D01G045300.1	Wheat	cytosol	14.95	31.28
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.37	31.19
TraesCS6D01G076600.1	Wheat	cytosol	33.58	28.97
TraesCS1D01G416200.1	Wheat	cytosol	12.74	26.65
TraesCS6D01G399100.1	Wheat	plasma membrane	36.32	17.38

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G548200	EnsemblPlants:TraesCS5D01G548200.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr5D:-:555913271..555916827

Molecular Weight (calculated)

106217.0 Da

IEP (calculated)

6.047

GRAVY (calculated)

-0.185

Length

950 amino acids

Sequence
(BLAST)

001: MAPVVSAALG ALGPLLVKLS GLLAGEYGRL KGVRREIRSL ESELTSMHAA LEEYTKLEDP SGQVKAWISL VRELAYDTKD IFDKFIHHLG KRGHRGGFKE
101: FLRKITLPLK TLGARREIAD QIDDLKDRIK QVKDLKDSYK LNDVPSSTTG HLAVDPRLHA VFAEEAHLVG VDGPRDDLAK WMVEEGNNSS KPRKVLSIVG
201: FGGLGKTTLA NEVYRKIQEQ FDCKAFVSVS QKPDIKKIMK DVISQVSCQG GSTKDTSDWD EIKSISKLRE LLQNKRYLII IDDVWSAQAW KTIKCAFPEN
301: NCSSRIIVTT RIIDVAKSCC LGGDDQMYEL KSLSDLHSRI LFFTRIFGSG KNCPDMLEEV SNNILKKCGG LPLAIISIAG LLANRPVIKE EWEKVKRSIG
401: SALEKTKSLE GMSSILSLSY NDLAPNLKTC LLYLSLFPED HVIERTRLVR LWIAEGFISE ERGQSKQEAA ENYFYELINK SMVQPVDIGF DGKVRACRVH
501: DMMLELIISK SVEDNFTTMV GGGQSLKNQQ GFIRRLSIQY IDKELASALA NLDLSHVRTL IVMPSCCIEH MPRLDLFEAL RVLDFEGYED LKDFDMNGME
601: KLVQLKYLNF RGKYISKLPS GIVMLTNLET LIFGYTRDQE SPAGFGRLTK LEHLQGYWLT LSDGIGDMKN LQLMSGLVIT SSITDVLEDL GSLTSLKELK
701: VCLRLANGIS DLVSCEDKRC EEAFLSSLCK LGTCKLRSLD ITPSGASLDF LDSWCPLPSS LQRFYTHYMD SFTKFPKWIT PALTNLADLG ICIAEMTEDD
801: LVTLGQLPSL LRLFLWPSNK LVGTIQRNSF LNLKVLDFEF KTKRAYVTFV EGSAPKLEEL TITFSVSAAK ANDFYSGIEH LSSLKEARIY LDDEDATRSE
901: CKAAAAEIRN EAGVNPNHPA LIIEREPKGE DDEEASGSNE EKSKGVSDEV

Best Arabidopsis Sequence Match ( AT1G59780.1 )
(BLAST)

001: MQDLYMVDSI VSFGVEKLWK LLSQEYERFQ GVEEQITELR DDLKMLMAFL SDADAKKQTR ALARNCLEEI KEITYDAEDI IEIFLLKGSV NMRSLACFPG
101: GRREIALQIT SISKRISKVI QVMQNLGIKS DIMDGVDSHA QLERKRELRH TFSSESESNL VGLEKNVEKL VEELVGNDSS HGVSITGLGG LGKTTLARQI
201: FDHDKVKSHF DGLAWVCVSQ EFTRKDVWKT ILGNLSPKYK DSDLPEDDIQ KKLFQLLETK KALIVFDDLW KREDWYRIAP MFPERKAGWK VLLTSRNDAI
301: HPHCVTFKPE LLTHDECWKL LQRIAFSKQK TITGYIIDKE MVKMAKEMTK HCKRLPLAVK LLGGLLDAKH TLRQWKLISE NIISHIVVGG TSSNENDSSS
401: VNHVLSLSFE GLPGYLKHCL LYLASYPEDH EIEIERLSYV WAAEGITYPG NYEGATIRDV ADLYIEELVK RNMVISERDA LTSRFEKCQL HDLMREICLL
501: KAKEENFLQI VTDPTSSSSV HSLASSRSRR LVVYNTSIFS GENDMKNSKL RSLLFIPVGY SRFSMGSNFI ELPLLRVLDL DGAKFKGGKL PSSIGKLIHL
601: KYLSLYQASV TYLPSSLRNL KSLLYLNLRI NSGQLINVPN VFKEMLELRY LSLPWERSSL TKLELGNLLK LETLINFSTK DSSVTDLHRM TKLRTLQILI
701: SGEGLHMETL SSALSMLGHL EDLTVTPSEN SVQFKHPKLI YRPMLPDVQH FPSHLTTISL VYCFLEEDPM PTLEKLLQLK VVSLWYNAYV GRRMVCTGGG
801: FPPLHRLEIW GLDALEEWIV EEGSMPLLHT LHIVDCKKLK EIPDGLRFIS SLKELAIRTN EKVFQKKVSK GGEDYYKMQH VPLIRYNWPQ EPENNEVIYS
901: FPSPII

Arabidopsis Description

Putative disease resistance protein At1g59780 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.