Factsheet for TraesCS6D01G373000.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G090550.1	Barley	peroxisome	62.81	86.16
TraesCS6D01G372900.1	Wheat	cytosol	30.66	83.56
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	78.64	83.51
KXG25270	Sorghum	cytosol	68.25	73.48
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	58.95	62.47
TraesCS7D01G201200.1	Wheat	cytosol	17.11	61.79
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	58.46	61.37
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	56.48	61.07
TraesCS5D01G554600.1	Wheat	cytosol	56.78	60.87
TraesCS5D01G548300.1	Wheat	cytosol	56.97	60.7
TraesCS5D01G548400.1	Wheat	cytosol	55.69	59.64
TraesCS5D01G547200.1	Wheat	plastid	55.19	59.3
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	55.59	59.16
TraesCS5D01G557500.1	Wheat	cytosol	55.09	58.94
TraesCS5D01G547800.1	Wheat	cytosol	46.09	58.47
TraesCS5D01G557700.1	Wheat	cytosol	54.7	58.27
Os10t0132700-01	Rice	cytosol	16.12	58.01
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	54.6	55.98
TraesCS6D01G399700.1	Wheat	cytosol	2.97	47.62
TraesCS7D01G412600.1	Wheat	extracellular	19.68	44.32
TraesCS1D01G416300.1	Wheat	cytosol	14.44	43.32
TraesCS5D01G086400.1	Wheat	cytosol	24.04	43.32
TraesCS7D01G540600.1	Wheat	cytosol	20.57	41.6
TraesCS5D01G098700.1	Wheat	cytosol	38.77	41.26
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	37.59	40.55
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	38.18	40.29
TraesCS5D01G098800.2	Wheat	plastid	36.3	40.24
TraesCS6D01G399200.1	Wheat	cytosol	20.67	39.89
Os10t0133000-00	Rice	cytosol	6.73	39.77
TraesCS5D01G390500.1	Wheat	cytosol	36.4	39.07
TraesCS7D01G479800.2	Wheat	cytosol	30.76	38.73
TraesCS6D01G399400.1	Wheat	cytosol	34.32	38.13
TraesCS7D01G486400.1	Wheat	cytosol	34.42	37.7
TraesCS5D01G492200.1	Wheat	cytosol	34.42	37.3
TraesCS7D01G086700.2	Wheat	cytosol	34.22	37.16
TraesCS7D01G116500.1	Wheat	golgi	36.2	36.93
TraesCS6D01G386700.1	Wheat	cytosol	33.33	36.12
TraesCS5D01G557600.2	Wheat	cytosol	33.43	36.11
TraesCS7D01G540000.1	Wheat	mitochondrion	7.02	36.04
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	33.04	35.76
TraesCS3D01G076100.1	Wheat	cytosol	33.63	35.71
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	34.72	35.31
TraesCS7D01G409800.1	Wheat	cytosol	30.96	35.05
TraesCS7D01G540500.1	Wheat	cytosol	33.93	34.72
TraesCS6D01G399500.1	Wheat	plastid	31.06	34.54
TraesCS1D01G090600.1	Wheat	cytosol	33.14	34.36
TraesCS2D01G585700.1	Wheat	cytosol	29.48	34.29
TraesCS7D01G479900.1	Wheat	cytosol	16.12	34.24
TraesCS2D01G545300.1	Wheat	cytosol	27.89	33.06
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	16.91	32.33
TraesCS6D01G398700.1	Wheat	plasma membrane	33.53	32.16
TraesCS5D01G032300.1	Wheat	cytosol	26.81	31.96
TraesCS1D01G045300.1	Wheat	cytosol	14.34	31.94
TraesCS1D01G019600.1	Wheat	cytosol	16.22	31.78
TraesCS6D01G076600.1	Wheat	cytosol	30.96	28.43
TraesCS1D01G416200.1	Wheat	cytosol	12.27	27.31
TraesCS6D01G399100.1	Wheat	plasma membrane	34.12	17.38

Protein Annotations

EnsemblPlants:TraesCS6D01G373000.2	EnsemblPlantsGene:TraesCS6D01G373000	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:458025257..458029158

Molecular Weight (calculated)

113561.0 Da

IEP (calculated)

7.338

GRAVY (calculated)

-0.222

Length

1011 amino acids

Sequence
(BLAST)

0001: MSNAAHCPQL QPWLGRAKAK TQGILQLVRT PLVSPLPCSS LHSDHTKHKP RDGFERGIER SMAVVSSSLG VLGPLVGKLT GLLANECARL KGVRREIRSL
0101: RSELTCMHGA VQKYTTLQDP DVQVKAWISL LRELAYDIED VIDKFIHQLG NEGHQHQGGF KEFFRKTARR LKTMGSRRGI ASQIEDLKIR LKEVKELKSS
0201: YKLDDIPFEH STVDPRLSAL FVEETHLVRI DGPRDDLANW MLEDKNGSIK DRKVLSIVGF GGLGKTTLAR EVYRKIRGHF DCQAFVSVSQ KPNVKKIMKD
0301: LISQMPCEKE FIEGIDTWDE AECIAKLXXX XXXXXYLIII DDIWSISAWD AIKYAFPEND FSSRIIATTR NVHVARSCSH GGNGRMYEME ALNDLHSKRL
0401: FFKRIFGSED CCPDMLKQVS NKILKKCGGL PLAIISIASL LANRPVVKDE WERVRRSVGS ALDKNRSLDG MNNILSLSYN DLSPNLKTCL LYLCIYPEDY
0501: VIERNVLVRR WIAEGFISEE RGQSKQEVAE NHFYELINKS MVQPVEIGYD GKARACQVHD MMLELIISKS VEDNFISLAG HGQTDLAKRD GLIRRLSVQH
0601: IDQELASMFR NEDLSHVRSL TVIASTCIKH LPRLILFEAL RVLEFQYCES LHEYDMNGID KLFQLKYLSL RGTHMSKLPS GIVRLYGLET LDLRDTRIKE
0701: LPVGIVQLDK LQHLLIARNP YSNVPDGEVK IPNGIGNMNN LQAISGFNII KSSLCAVEEL GNLTNLKELH LQLDGGGSQE YKRHEEMLLS SLCKLGTCKL
0801: QSLWIYSPDS TPLQLLDSWS PLPYNLQMFQ MSTSYDLPKM PKWIVPALTS LAYLNINLIE ATQEDLRMLG EMPALLSLSI TFNAVQKERL TLQGVAFPCL
0901: KEFYLIRTFR YGIAIYLTFE EGAMSKLEKL EVPLFVSVAE AYGFYLGLGH LPCLRDAEIT LCNNADTSYE SNSAAAAAIR NEANSHPNHP RLSIRCEMEE
1001: GYSYKEESYT E

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.