Factsheet for TraesCS1D01G090600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G000800.1	Wheat	cytosol	94.87	94.68
TraesCSU01G172000.1	Wheat	cytosol	91.59	93.22
TraesCS1B01G108500.4	Wheat	cytosol	89.44	87.29
TraesCS3D01G076100.1	Wheat	cytosol	56.31	57.67
TraesCS7D01G412600.1	Wheat	extracellular	20.92	45.43
TraesCS6D01G399700.1	Wheat	cytosol	2.87	44.44
TraesCS5D01G086400.1	Wheat	cytosol	24.92	43.32
TraesCS6D01G372900.1	Wheat	cytosol	16.1	42.32
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	39.79	41.41
TraesCS7D01G540600.1	Wheat	cytosol	21.23	41.4
TraesCS1D01G416300.1	Wheat	cytosol	14.15	40.95
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	39.49	40.19
Zm00001d018786_P004	Maize	cytosol	37.03	40.02
TraesCS6D01G399400.1	Wheat	cytosol	37.13	39.78
TraesCS5D01G492200.1	Wheat	cytosol	37.95	39.66
TraesCS7D01G086700.2	Wheat	cytosol	37.74	39.53
TraesCS5D01G390500.1	Wheat	cytosol	37.74	39.07
TraesCS6D01G399200.1	Wheat	cytosol	20.92	38.93
TraesCS6D01G386700.1	Wheat	cytosol	36.92	38.59
TraesCS7D01G486400.1	Wheat	cytosol	36.51	38.57
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	36.92	38.54
TraesCS5D01G098700.1	Wheat	cytosol	37.23	38.21
TraesCS5D01G098800.2	Wheat	plastid	35.69	38.16
TraesCS5D01G557600.2	Wheat	cytosol	36.1	37.61
TraesCS7D01G201200.1	Wheat	cytosol	10.56	36.79
TraesCS5D01G557700.1	Wheat	cytosol	35.49	36.46
TraesCS5D01G554600.1	Wheat	cytosol	35.18	36.37
TraesCS7D01G409800.1	Wheat	cytosol	33.23	36.28
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	35.28	36.21
TraesCS7D01G540000.1	Wheat	mitochondrion	7.28	36.04
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	35.18	36.03
TraesCS2D01G545300.1	Wheat	cytosol	31.38	35.87
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	34.26	35.72
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	36.1	35.7
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	34.87	35.64
TraesCS5D01G548400.1	Wheat	cytosol	34.46	35.59
TraesCS5D01G557500.1	Wheat	cytosol	34.46	35.56
TraesCS5D01G548300.1	Wheat	cytosol	34.46	35.41
TraesCS7D01G479800.2	Wheat	cytosol	29.03	35.24
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	34.67	35.1
TraesCS5D01G547200.1	Wheat	plastid	33.85	35.07
TraesCS6D01G398700.1	Wheat	plasma membrane	37.74	34.91
TraesCS7D01G540500.1	Wheat	cytosol	35.28	34.82
TraesCS5D01G032300.1	Wheat	cytosol	29.95	34.43
TraesCS6D01G399500.1	Wheat	plastid	32.1	34.43
TraesCS7D01G116500.1	Wheat	golgi	34.77	34.21
TraesCS5D01G547800.1	Wheat	cytosol	27.79	34.0
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	34.46	33.8
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	34.36	33.14
TraesCS1D01G019600.1	Wheat	cytosol	17.44	32.95
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.85	32.89
TraesCS2D01G585700.1	Wheat	cytosol	28.92	32.45
TraesCS1D01G045300.1	Wheat	cytosol	13.74	29.52
TraesCS6D01G076600.1	Wheat	cytosol	32.31	28.61
TraesCS7D01G479900.1	Wheat	cytosol	13.95	28.57
TraesCS1D01G416200.1	Wheat	cytosol	11.49	24.67
TraesCS6D01G399100.1	Wheat	plasma membrane	37.33	18.34

Protein Annotations

EnsemblPlants:TraesCS1D01G090600.1	EnsemblPlantsGene:TraesCS1D01G090600	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF16	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr1D:-:76976168..76980380

Molecular Weight (calculated)

110570.0 Da

IEP (calculated)

6.528

GRAVY (calculated)

-0.133

Length

975 amino acids

Sequence
(BLAST)

001: MEAALVTVST GVMKPLLSKL FKLLLDEHRK LKGVRRDAKF IGDELRSMKA ALEVLADEEQ LEPPMRIWRD DVRELSYDME DCIDGFVAHV DHELDGRTML
101: KKFVDMLKKP KHRYQAASEI GKLKARATEA SERHKRYNII RPTPCISTCA IDPRLPALYA EVDELVGIDG PKDDIIDWFQ WEATSTQPQV LSIVGSGGLG
201: KTTLAKQVYH ALESQFSCAA FVSVSRNPDM RKILRDIAQG VGFTDSPPDD DVQQLISKLR QHLKDERYFI VIDDVWSTDV WETIRLVLLN NNNHGSRIIT
301: TTRNTEVASC CSSGGGHVYK MEPLTFDDSK RLFFRRAFGP ENLCHPHLEK VSNDILRKCS GLPLAIITVS SLLADQHEDE WKRVLAAIGS ALAKDSGADK
401: MTKILSLSYF DLPHHLRACL LYLSIFPEDS AIWKRHLIHK WIAEGFIHEK QGRNRYEIGE SYFNELINRS LIQPVGATFS QVESCQVHDI ILDFITCKAA
501: EENFVTKFSD VEDGQNSCYS VRRLFVGNNS NEKVAISAPI LSHVRSLIIY AHAPQVSLLA FPVLRVLDLG KCWWLEEHHV ANIEKLLLLK YLSLANVTLL
601: PKKFGELQYL ETLDITNTRI LEMPLAVTSL QRLASLNVHY HIRFPDGMIG KMQSLEELEA FGVHSYEQGK PLEEFSQLTK MWRLKVQLGM FELWEGTGQI
701: EDLHGYLGTL VSSCNLRRLN ISKLSSNVLA VKTYFPLSLE SWCPTTPCSL QELHITYCFI DKVPNWMSLL RNLRELEIYV VSVRPEDVRI LGSIPTLLIL
801: KLKTFSSTDG RILIHGFSNL KYFHLELLHC GTSLEFEEGS MPRLEHLELE FRVHQMDCLN GSPNFGIQHL SALRKVEVCI LCNFGNRDNP LAGLECCFGK
901: FIGMIIEADI EALPNCSSFL LQYGHVPFGN VACEHYTKIV ETDCEKEDEA GRGKVGSAGA PHWHVGENYF RMSFG

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.