Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G000800.1 | Wheat | cytosol | 98.64 | 96.72 |
| TraesCS1D01G090600.1 | Wheat | cytosol | 93.22 | 91.59 |
| TraesCS1B01G108500.4 | Wheat | cytosol | 89.67 | 85.99 |
| Os08t0174800-01 | Rice | cytosol | 38.31 | 45.99 |
| TraesCSU01G071000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 29.02 | 41.19 |
| Zm00001d018786_P004 | Maize | cytosol | 37.27 | 39.58 |
| TraesCSU01G071200.1 | Wheat | cytosol | 25.37 | 39.26 |
| TraesCSU01G082800.1 | Wheat | cytosol | 37.06 | 38.25 |
| TraesCSU01G165600.1 | Wheat | cytosol | 37.16 | 38.24 |
| TraesCSU01G168400.1 | Wheat | cytosol | 28.39 | 37.62 |
| TraesCSU01G071100.1 | Wheat | endoplasmic reticulum, plasma membrane | 36.33 | 37.58 |
| TraesCSU01G171700.1 | Wheat | cytosol | 36.43 | 37.25 |
| TraesCSU01G081600.1 | Wheat | cytosol | 36.43 | 37.25 |
| TraesCSU01G083900.1 | Wheat | cytosol | 31.0 | 36.94 |
| TraesCSU01G204500.1 | Wheat | cytosol, mitochondrion, plastid | 23.59 | 36.57 |
| TraesCSU01G179000.1 | Wheat | plasma membrane | 25.47 | 36.53 |
| TraesCSU01G232800.1 | Wheat | cytosol | 24.63 | 36.48 |
| TraesCSU01G168100.1 | Wheat | cytosol | 22.44 | 35.95 |
| TraesCSU01G135400.1 | Wheat | cytosol | 34.76 | 35.84 |
| TraesCSU01G196800.1 | Wheat | cytosol, golgi, plastid | 24.22 | 35.8 |
| TraesCSU01G082900.1 | Wheat | mitochondrion | 26.93 | 35.73 |
| TraesCSU01G203600.1 | Wheat | cytosol | 22.13 | 35.69 |
| TraesCSU01G235500.1 | Wheat | cytosol | 12.11 | 29.15 |
| TraesCSU01G208400.1 | Wheat | cytosol | 6.47 | 22.96 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF16 | InterPro:RX-like_CC |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCSU01G172000 | EnsemblPlants:TraesCSU01G172000.1 | TIGR:cd14798 | SEG:seg |
Description
No Description!
Coordinates
chrUn:+:253483476..253487456
Molecular Weight (calculated)
108414.0 Da
IEP (calculated)
6.334
GRAVY (calculated)
-0.077
Length
958 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAALVTVST GVMKPLLSKL FKLPLDEHRK LQGVRRDAKF IGDELRSMKA ALEVLADEEQ LEPAMRIWRD DVRELSYDME DCIDVFVAHV DHEPDGRTML
101: KKFVDMLKKP KHRHQAASEI GKLKARVAEA SERHKRYNII RPTPCISSCA IDPRLPALYA EVDELVGIDG PKDDIIDWFQ WEATSTQPQV LSIVGSGGLG
201: KTTLAKQVYH ALESQFSCAA FVSVSRNPDM RKILRDIAQG VGFTDSPPDD DVQQLISKLR QHLKNERYFV VIDDVWSADV WETIRLVLLN NNNHGSRIIT
301: TTRNTEVASC CSSGGGHVYK MEPLTFDDSK RLFFRRTFGP EDLCHPHLEK VSNDILRKCS GLPLAIITVS SLLADQHAED EWKRVLAAIG SALAKDSGAD
401: KMTKILSFSY FDLPHHLRAC LLYLSIFPED STIWKQHLIH MWVAEGFIHE KQGRSRYEIG ESYFNELINR SLIQPVGATL GQVESCQVHD IVLDFITCIA
501: AEVNFVTKFS DVEHGHNSYD RVRRLIIGNT SNEKVAISTS PILSHVRSLI IYAHDPQVSL LAFPVLRVLD LGKCWWLEEH HVANIEKLLL LKYLSLANVT
601: LLPQKIGELQ YLETLDITNT RILEMPLAVT SLQWLASLNV HYHIRFTDGM IGKMQSLEEL ETFGVHSYEQ GKPLEEFSQL TKMWRLKVQL GMFELWEGPG
701: QIEDLHGYLG TLVSSCNLRH LNISKLSSNF LAVKTYFPLS LDSWCPTTPC SLQELHITYC FIDKVPNWMS LLCNLRELEI YVASVRPEDV RILGSIPTLL
801: ILKLKTFNGT DGRILIHGFS NLKYFHLELL YCGTSLEFEE GSMPRLEHLE LEFRVHQMDC LNGSPNFGIQ HLSALRKVEV CILCNFGNRD NPLAGLECCF
901: GKFIGMIIEA DIEALPNCSS FLLQYGNVPF GNVACEHYTK IVSSLPESVA FGHFSSSS
101: KKFVDMLKKP KHRHQAASEI GKLKARVAEA SERHKRYNII RPTPCISSCA IDPRLPALYA EVDELVGIDG PKDDIIDWFQ WEATSTQPQV LSIVGSGGLG
201: KTTLAKQVYH ALESQFSCAA FVSVSRNPDM RKILRDIAQG VGFTDSPPDD DVQQLISKLR QHLKNERYFV VIDDVWSADV WETIRLVLLN NNNHGSRIIT
301: TTRNTEVASC CSSGGGHVYK MEPLTFDDSK RLFFRRTFGP EDLCHPHLEK VSNDILRKCS GLPLAIITVS SLLADQHAED EWKRVLAAIG SALAKDSGAD
401: KMTKILSFSY FDLPHHLRAC LLYLSIFPED STIWKQHLIH MWVAEGFIHE KQGRSRYEIG ESYFNELINR SLIQPVGATL GQVESCQVHD IVLDFITCIA
501: AEVNFVTKFS DVEHGHNSYD RVRRLIIGNT SNEKVAISTS PILSHVRSLI IYAHDPQVSL LAFPVLRVLD LGKCWWLEEH HVANIEKLLL LKYLSLANVT
601: LLPQKIGELQ YLETLDITNT RILEMPLAVT SLQWLASLNV HYHIRFTDGM IGKMQSLEEL ETFGVHSYEQ GKPLEEFSQL TKMWRLKVQL GMFELWEGPG
701: QIEDLHGYLG TLVSSCNLRH LNISKLSSNF LAVKTYFPLS LDSWCPTTPC SLQELHITYC FIDKVPNWMS LLCNLRELEI YVASVRPEDV RILGSIPTLL
801: ILKLKTFNGT DGRILIHGFS NLKYFHLELL YCGTSLEFEE GSMPRLEHLE LEFRVHQMDC LNGSPNFGIQ HLSALRKVEV CILCNFGNRD NPLAGLECCF
901: GKFIGMIIEA DIEALPNCSS FLLQYGNVPF GNVACEHYTK IVSSLPESVA FGHFSSSS
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.