Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G398700.1 | Wheat | plasma membrane | 94.81 | 60.72 |
| TraesCSU01G071200.1 | Wheat | cytosol | 52.89 | 57.67 |
| TraesCS6B01G464300.1 | Wheat | cytosol | 71.85 | 51.87 |
| Zm00001d007688_P002 | Maize | cytosol | 31.85 | 51.31 |
| TraesCSU01G071100.1 | Wheat | endoplasmic reticulum, plasma membrane | 67.26 | 49.03 |
| TraesCSU01G082800.1 | Wheat | cytosol | 66.07 | 48.06 |
| TraesCSU01G165600.1 | Wheat | cytosol | 65.93 | 47.8 |
| TraesCS6B01G465100.1 | Wheat | extracellular, mitochondrion, plasma membrane | 68.44 | 47.68 |
| TraesCSU01G171700.1 | Wheat | cytosol | 65.19 | 46.96 |
| TraesCSU01G081600.1 | Wheat | cytosol | 65.19 | 46.96 |
| TraesCSU01G083900.1 | Wheat | cytosol | 51.56 | 43.28 |
| Os08t0372700-00 | Rice | nucleus | 56.0 | 41.58 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 56.15 | 41.24 |
| TraesCSU01G168400.1 | Wheat | cytosol | 43.41 | 40.53 |
| TraesCSU01G179000.1 | Wheat | plasma membrane | 37.48 | 37.87 |
| TraesCSU01G082900.1 | Wheat | mitochondrion | 40.0 | 37.4 |
| TraesCSU01G204500.1 | Wheat | cytosol, mitochondrion, plastid | 33.78 | 36.89 |
| TraesCSU01G168100.1 | Wheat | cytosol | 32.59 | 36.79 |
| TraesCSU01G196800.1 | Wheat | cytosol, golgi, plastid | 34.81 | 36.27 |
| TraesCSU01G203600.1 | Wheat | cytosol | 31.7 | 36.03 |
| TraesCSU01G232800.1 | Wheat | cytosol | 33.93 | 35.39 |
| KXG21363 | Sorghum | cytosol | 51.11 | 29.34 |
| TraesCSU01G172000.1 | Wheat | cytosol | 41.19 | 29.02 |
| TraesCSU01G000800.1 | Wheat | cytosol | 41.19 | 28.45 |
| TraesCSU01G135400.1 | Wheat | cytosol | 38.67 | 28.09 |
| TraesCSU01G235500.1 | Wheat | cytosol | 10.81 | 18.34 |
| TraesCSU01G208400.1 | Wheat | cytosol | 1.19 | 2.96 |
Protein Annotations
| EnsemblPlants:TraesCSU01G071000.1 | EnsemblPlantsGene:TraesCSU01G071000 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| InterPro:RX-like_CC | ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF9 | PFAM:PF00931 | PRINTS:PR00364 |
| SEG:seg | SUPFAM:SSF52058 | SUPFAM:SSF52540 | TIGR:cd14798 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrUn:+:62089692..62092631
Molecular Weight (calculated)
77099.6 Da
IEP (calculated)
7.214
GRAVY (calculated)
-0.184
Length
675 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVALVSM ATGVLKPVIA KLFVLLGNEY KRFKSVRKEI KSLAHELAAM DPFLLKMSEE EDPDVRDKVW MNEVRELSYD LDDAIDDFMQ SIGDKDEKPD
101: GFIEKIKSSL GKLGKMKARG RIGREIQDLK KQIVEARNTN ARYNGRQTVN NTQNDTVNPR AVAIFEHASK LVGIDGPKAE IIKLLAQEDG RASTQQRKIV
201: SIVGSGGMGK TTLAKQVYEE LKGKFERHAF ISVSRNPDII NILRAILSEL SGQGNADTIA WNIEHMICKI TNFLGDKRYI IVVDDLWDVK TWNDLKCVFP
301: VTSSGSIIIT TTRINEVADS CLSSCHGHIY NIRHLDMVHS RELFNIRLFD SSENCPSHLE KVSGEILEKC VGLPLAIISI SGLLATKERT ENQWNQVKDS
401: IGRALERNPS IEGMMKILSL SYFDLPSHQK TCLLYLSIFP EDSIIEKKAL IWRWIAEGFI QKDDKYTSYQ LGERCFNELL NRRLIQVAWT TEEYGKVESC
501: RVHDVILDFI ISKAIEENFV TFVGVPCITS GTQRKVRRLP LQVDGKDHSI LKKGLVLSHV RSVNVFGYTV EIPSLDEFRY LRVLDFELCR QVENHHLANI
601: GNLFQLRHLN LSWTEVSELP EEIGRLYCLE MLDIRGTKVH ELPATIVNLK NWWICLLILE LSFLMELQRC KQWRC
101: GFIEKIKSSL GKLGKMKARG RIGREIQDLK KQIVEARNTN ARYNGRQTVN NTQNDTVNPR AVAIFEHASK LVGIDGPKAE IIKLLAQEDG RASTQQRKIV
201: SIVGSGGMGK TTLAKQVYEE LKGKFERHAF ISVSRNPDII NILRAILSEL SGQGNADTIA WNIEHMICKI TNFLGDKRYI IVVDDLWDVK TWNDLKCVFP
301: VTSSGSIIIT TTRINEVADS CLSSCHGHIY NIRHLDMVHS RELFNIRLFD SSENCPSHLE KVSGEILEKC VGLPLAIISI SGLLATKERT ENQWNQVKDS
401: IGRALERNPS IEGMMKILSL SYFDLPSHQK TCLLYLSIFP EDSIIEKKAL IWRWIAEGFI QKDDKYTSYQ LGERCFNELL NRRLIQVAWT TEEYGKVESC
501: RVHDVILDFI ISKAIEENFV TFVGVPCITS GTQRKVRRLP LQVDGKDHSI LKKGLVLSHV RSVNVFGYTV EIPSLDEFRY LRVLDFELCR QVENHHLANI
601: GNLFQLRHLN LSWTEVSELP EEIGRLYCLE MLDIRGTKVH ELPATIVNLK NWWICLLILE LSFLMELQRC KQWRC
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.