Factsheet for TraesCSU01G165600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G446700.1	Wheat	extracellular	8.81	100.0
TraesCSU01G168100.1	Wheat	cytosol	64.02	99.67
TraesCSU01G179000.1	Wheat	plasma membrane	59.51	82.93
TraesCSU01G071000.1	Wheat	endoplasmic reticulum, golgi, plastid	47.8	65.93
TraesCSU01G082800.1	Wheat	cytosol	61.44	61.64
TraesCSU01G071100.1	Wheat	endoplasmic reticulum, plasma membrane	60.47	60.8
TraesCSU01G071200.1	Wheat	cytosol	39.85	59.94
TraesCSU01G081600.1	Wheat	cytosol	59.29	58.91
TraesCSU01G171700.1	Wheat	cytosol	59.29	58.91
TraesCSU01G168400.1	Wheat	cytosol	43.82	56.43
TraesCSU01G083900.1	Wheat	cytosol	47.91	55.47
TraesCSU01G203600.1	Wheat	cytosol	34.26	53.7
Zm00001d007688_P002	Maize	cytosol	23.63	52.51
TraesCSU01G196800.1	Wheat	cytosol, golgi, plastid	35.77	51.39
TraesCSU01G204500.1	Wheat	cytosol, mitochondrion, plastid	34.05	51.29
TraesCSU01G232800.1	Wheat	cytosol	35.34	50.85
Os08t0372700-00	Rice	nucleus	49.62	50.83
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	49.84	50.49
TraesCSU01G082900.1	Wheat	mitochondrion	38.56	49.72
TraesCSU01G235500.1	Wheat	cytosol	18.26	42.71
TraesCSU01G208400.1	Wheat	cytosol	10.85	37.41
TraesCSU01G172000.1	Wheat	cytosol	38.24	37.16
TraesCSU01G000800.1	Wheat	cytosol	38.24	36.44
KXG21363	Sorghum	cytosol	45.86	36.31
TraesCSU01G135400.1	Wheat	cytosol	35.34	35.41

Protein Annotations

EnsemblPlants:TraesCSU01G165600.1	EnsemblPlantsGene:TraesCSU01G165600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrUn:+:241198052..241208084

Molecular Weight (calculated)

104675.0 Da

IEP (calculated)

6.228

GRAVY (calculated)

-0.064

Length

931 amino acids

Sequence
(BLAST)

001: MEAALVSAAT GALKPVLGKL ATILGDEYKR FKGVRGEIKS LSSELTAMEA FLLKMSEEED PDVQDKVWMN EVRELSYDME DSIDDFMQSV GSEDTKPDGF
101: LEKMKNSLGK MGKMKARRRI GNEIGDLKKQ IIEVAERNAR YKAHEAFSKA KNTTIDPRAL AIFQHASELV GIDEPKAELI KLLTQGVSTQ EKIKLVSIVG
201: SGGMGKTTLA NQVYEDLKGE FQCQAFISVS RNPEMMNIMR TIFSEVSGKD YANTEAGSIQ QLISKIADFL ADKRYFVVVD DIWDVDTWHV LKHAFPVKSS
301: GSIIITTTRI NDVAESCRST PFSGDIYCIR PLDMVHSRQL FYTRLFNVEE NCPSYLKKVS EHILRKCAGL PLAIIAISGL LANTERTEGP WKQVEDSIGR
401: ALQRNPSVEG MMKILSLSYF DLPAHLKSCL LCLSIFPEDS VISKKILIKR WIAERLIHTE AGYSTTYEFG ERCFNELINR SLIQPAETNK YGMVKYCRIH
501: DTVLDFIISK SIEENFVTLV GVPSLTVGTR VRRLSLQAGK QKELIVPKGL VLSHVRSLDV FGESVKIPSM DKFRHLRFLD FEGCKQLENH HLKNIDNLFQ
601: LRYLSLHGVK KVSNLPEQIG RLWCLEILDL TDTSVYELPA SIVNLKRLVH LLVNLYVTLP CGIPKLQALE KLKHVNVYCQ SFNFLQEFEQ MQSLKVLHLH
701: FEDYYFVEGM DAENESKKTI IATSLTNLGN LLSLTVCDGP EFVRESLCPM PLSLQKLKVL NSSIPHVPNW VGSLINLQKL RLELVRAEQE DLYILGGLPV
801: LHCLILRIDG HEIRNTSLTE ELEVTRVIVC GEVGFPCLRI FIFDSQCAVM NLTFAAGAMP LVDDLLIVFN AEETGSPGTS GDFDLGIENL LSLVKIRCVV
901: WGDEDDRVEA AEAAIREAAN AHPNRPTLRL D

Best Arabidopsis Sequence Match ( AT5G35450.1 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.