Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G204500.1 | Wheat | cytosol, mitochondrion, plastid | 76.87 | 100.0 |
| TraesCSU01G168400.1 | Wheat | cytosol | 51.49 | 57.26 |
| TraesCSU01G203600.1 | Wheat | cytosol | 40.3 | 54.55 |
| TraesCSU01G071000.1 | Wheat | endoplasmic reticulum, golgi, plastid | 43.28 | 51.56 |
| TraesCSU01G196800.1 | Wheat | cytosol, golgi, plastid | 40.92 | 50.77 |
| TraesCSU01G071100.1 | Wheat | endoplasmic reticulum, plasma membrane | 58.08 | 50.43 |
| TraesCSU01G082900.1 | Wheat | mitochondrion | 45.15 | 50.28 |
| TraesCSU01G082800.1 | Wheat | cytosol | 57.84 | 50.11 |
| TraesCSU01G168100.1 | Wheat | cytosol | 36.82 | 49.5 |
| TraesCSU01G171700.1 | Wheat | cytosol | 57.59 | 49.41 |
| TraesCSU01G081600.1 | Wheat | cytosol | 57.59 | 49.41 |
| TraesCSU01G232800.1 | Wheat | cytosol | 39.68 | 49.3 |
| TraesCSU01G179000.1 | Wheat | plasma membrane | 40.42 | 48.65 |
| TraesCSU01G165600.1 | Wheat | cytosol | 55.47 | 47.91 |
| TraesCSU01G071200.1 | Wheat | cytosol | 36.69 | 47.66 |
| TraesCSU01G235500.1 | Wheat | cytosol | 21.64 | 43.72 |
| Os08t0372700-00 | Rice | nucleus | 49.38 | 43.67 |
| Os08t0373000-00 | Rice | cytosol, endoplasmic reticulum | 49.63 | 43.42 |
| Zm00001d007688_P002 | Maize | cytosol | 20.77 | 39.86 |
| TraesCSU01G208400.1 | Wheat | cytosol | 12.44 | 37.04 |
| KXG21363 | Sorghum | cytosol | 46.02 | 31.46 |
| TraesCSU01G172000.1 | Wheat | cytosol | 36.94 | 31.0 |
| TraesCSU01G000800.1 | Wheat | cytosol | 36.94 | 30.4 |
| TraesCSU01G135400.1 | Wheat | cytosol | 34.95 | 30.25 |
Protein Annotations
| EnsemblPlants:TraesCSU01G083900.1 | EnsemblPlantsGene:TraesCSU01G083900 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| ncoils:Coil | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF9 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrUn:-:75356907..75368001
Molecular Weight (calculated)
90463.3 Da
IEP (calculated)
8.358
GRAVY (calculated)
-0.113
Length
804 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTHHRIGKE IQGLKKQIIE VGQRNARYKN REDFSSTRNA TVDPRALAIF EHASKLIGID EPKCEIIKML TQDDGVASTQ HQIKMVSIVG AGGMGKTTLT
101: NQVYQELKGQ FECHNFLSVS RNPDMMCILR TILSEVTGQK YGDTKSGSIQ QVISKINDFL ADKRYFIVVD DIWDVKTWDV IKCAFPMNTC GSILITTTRM
201: TDVARACCSS FVGHIYNMRP LDMAQSRKLF YTRLDSKEDC LEHLEEVCDQ ILEKCAGSPL AIIAISGLLA NRENTIEEWD RVKNSIGRTL ERNATVELMM
301: KILSLSYFDL PAHLKTCLLY LSIFPEDYII EKKDLIRRWI GEGFIRKEGR YTLYELGQRY FNELINRSLV QPVKSNEHGV VMSCRVHDTI LDFITSKSIE
401: ENFVTFNGLP DLNTVTQRKV RRLSLQVGNQ GNSSNSLLLS HVRSINVFGY SGEIPSLDKF KYSRVLDFGG FSQLESHHLA NIGRLFQLKH LNLRNTRINE
501: LSEQIGLLVF LQMLDIRGTY VNKLPASIAN LRRLVYLLTD TGVIFPDGIA KMQALEILKR VAVFKQSVNF LQEVGQLKNM RKLILDCEEN TAAVKEQGDA
601: TGVKEERNKA IGCSLHKLWT QNIGSVTIWN HECRISVEPK SKKLMGGAPQ VQSWMGFLIN LQELQLEVQG VDQEHICILG GLPALIVLKM KVAAKGNDLL
701: RVSGAVGFPC LRELLYHKVL FGGMDLLFEP GSMPKLEKLD LLFNAAECDS LSSEAFDLGI GNLLNLGSVK CEVRGWLNSA VSAAKAYLEK TARTHPNCPT
801: LLLA
101: NQVYQELKGQ FECHNFLSVS RNPDMMCILR TILSEVTGQK YGDTKSGSIQ QVISKINDFL ADKRYFIVVD DIWDVKTWDV IKCAFPMNTC GSILITTTRM
201: TDVARACCSS FVGHIYNMRP LDMAQSRKLF YTRLDSKEDC LEHLEEVCDQ ILEKCAGSPL AIIAISGLLA NRENTIEEWD RVKNSIGRTL ERNATVELMM
301: KILSLSYFDL PAHLKTCLLY LSIFPEDYII EKKDLIRRWI GEGFIRKEGR YTLYELGQRY FNELINRSLV QPVKSNEHGV VMSCRVHDTI LDFITSKSIE
401: ENFVTFNGLP DLNTVTQRKV RRLSLQVGNQ GNSSNSLLLS HVRSINVFGY SGEIPSLDKF KYSRVLDFGG FSQLESHHLA NIGRLFQLKH LNLRNTRINE
501: LSEQIGLLVF LQMLDIRGTY VNKLPASIAN LRRLVYLLTD TGVIFPDGIA KMQALEILKR VAVFKQSVNF LQEVGQLKNM RKLILDCEEN TAAVKEQGDA
601: TGVKEERNKA IGCSLHKLWT QNIGSVTIWN HECRISVEPK SKKLMGGAPQ VQSWMGFLIN LQELQLEVQG VDQEHICILG GLPALIVLKM KVAAKGNDLL
701: RVSGAVGFPC LRELLYHKVL FGGMDLLFEP GSMPKLEKLD LLFNAAECDS LSSEAFDLGI GNLLNLGSVK CEVRGWLNSA VSAAKAYLEK TARTHPNCPT
801: LLLA
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.