Factsheet for TraesCS5D01G557700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G314400.1	Wheat	cytosol	87.14	88.54
TraesCS5D01G557500.1	Wheat	cytosol	85.04	85.4
TraesCS5B01G565500.1	Wheat	cytosol	80.19	81.92
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	75.55	75.47
TraesCS5D01G548400.1	Wheat	cytosol	66.6	66.95
TraesCS5D01G554600.1	Wheat	cytosol	65.54	65.96
TraesCS6D01G372900.1	Wheat	cytosol	25.4	64.96
TraesCS5D01G548300.1	Wheat	cytosol	63.75	63.75
TraesCS7D01G201200.1	Wheat	cytosol	18.65	63.21
TraesCS5D01G547200.1	Wheat	plastid	61.96	62.49
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	61.33	62.25
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	63.96	61.56
TraesCS5D01G547800.1	Wheat	cytosol	50.58	60.23
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	60.8	59.92
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	59.75	59.43
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	59.22	59.03
Os10t0132700-01	Rice	cytosol	16.75	56.58
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	58.27	54.7
TraesCS7D01G412600.1	Wheat	extracellular	22.34	47.22
TraesCS6D01G399700.1	Wheat	cytosol	3.06	46.03
TraesCS5D01G086400.1	Wheat	cytosol	25.4	42.96
TraesCS1D01G416300.1	Wheat	cytosol	15.07	42.43
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	40.78	41.3
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	41.41	41.02
TraesCS5D01G098700.1	Wheat	cytosol	40.78	40.74
TraesCS6D01G399200.1	Wheat	cytosol	22.44	40.65
TraesCS7D01G540600.1	Wheat	cytosol	21.29	40.4
TraesCS5D01G390500.1	Wheat	cytosol	39.73	40.02
TraesCS6D01G399400.1	Wheat	cytosol	38.15	39.78
TraesCS5D01G098800.2	Wheat	plastid	38.15	39.69
TraesCS7D01G479800.2	Wheat	cytosol	33.4	39.48
TraesCS7D01G486400.1	Wheat	cytosol	38.04	39.11
TraesCS7D01G086700.2	Wheat	cytosol	37.83	38.56
TraesCS6D01G386700.1	Wheat	cytosol	37.62	38.26
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	37.41	38.01
TraesCS5D01G492200.1	Wheat	cytosol	37.2	37.83
TraesCS5D01G557600.2	Wheat	cytosol	36.78	37.29
TraesCS7D01G409800.1	Wheat	cytosol	34.88	37.07
TraesCS3D01G076100.1	Wheat	cytosol	37.09	36.97
TraesCS2D01G545300.1	Wheat	cytosol	32.88	36.58
TraesCS5D01G032300.1	Wheat	cytosol	32.67	36.56
TraesCS7D01G116500.1	Wheat	golgi	37.62	36.02
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	37.62	35.92
TraesCS1D01G090600.1	Wheat	cytosol	36.46	35.49
TraesCS7D01G540500.1	Wheat	cytosol	36.25	34.82
TraesCS2D01G585700.1	Wheat	cytosol	31.82	34.75
TraesCS6D01G399500.1	Wheat	plastid	33.19	34.65
TraesCS7D01G540000.1	Wheat	mitochondrion	6.85	32.99
TraesCS7D01G479900.1	Wheat	cytosol	16.54	32.98
TraesCS6D01G398700.1	Wheat	plasma membrane	36.56	32.92
Os10t0133000-00	Rice	cytosol	5.9	32.75
TraesCS1D01G019600.1	Wheat	cytosol	17.6	32.36
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.6	31.57
TraesCS1D01G045300.1	Wheat	cytosol	14.65	30.62
TraesCS6D01G076600.1	Wheat	cytosol	34.35	29.61
TraesCS1D01G416200.1	Wheat	cytosol	12.96	27.09
TraesCS6D01G399100.1	Wheat	plasma membrane	37.93	18.14

Protein Annotations

EnsemblPlants:TraesCS5D01G557700.1	EnsemblPlantsGene:TraesCS5D01G557700	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:+:559981536..559984750

Molecular Weight (calculated)

105898.0 Da

IEP (calculated)

6.058

GRAVY (calculated)

-0.237

Length

949 amino acids

Sequence
(BLAST)

001: MAVVSAAHGA FGPLLGKLTA LLADECGRLK GVRREIRSLR SELASMHAAL KEYTKLDDPS DQVKAWISLV RELAYDTEDV FDKFIHHLGD SPDHGGFKEL
101: FRKAARRLKT LGARHGIAGE IHDLKDRIRQ VKELKDCYKL PNNAPSSTAG PAAVDPRLHA LFADEAHLVG IDGPRDHLAK WMLEEANTSP KHCKVLSIVG
201: FGGLGKTTLA NEVCREIQGE FDCKAFVSVS QKPDIKKIIK DVISQVSCQG GSTKDDTTDW DEMKSISELR VLLQNKRYLI IIDDVWSTQA WHAIKCAFPE
301: NDCSSRIIAT TRIIDVAKSC CLSADDRVYE LEALSDLHSR RLFFKRLFRS EEDCPEMLKE VSNKILKKCG GLPLAIISIS GLLANRPAIK EEWEKVKRSI
401: GTALEKTNSL EGMSSILSLS YNDLAPHLKT CLLYLSLFPE DHLIYRDRLV RRWIAEGFIS EERGQSKQEV AENYFYELIN KSMVQPVDIE YDGKVRACRV
501: HDMMLEIIIS KSAEDNFTTV VGGGQTSLLN HQDSIRRLSI QHIDKKLASE LANVDLSHVR TLIVMPSCCI THLPSLDRFE ALRVLDFEGC EDLKDCDMKG
601: MDKLFQLKYL SFTGTGISKL PAGIVMLGNL ETLDFTNTDV EELPAGITRL TELQHLNGYL NKHLPNGIGG MRNLQLMPKF IITSQETDVL EDLGNLTSLE
701: ELNVHLGRNV SCEDKRCEKE AFLSSLCKLG NCKLRSLLIN AYGGSLDFSD SWSPLPSSLQ RFWAANRDSF TNVPKWITPE LINLADLLIS LTELTEDGLL
801: TLGQLPSLLR LRLWPSKKFV GTVQATSFPN LKVLSFRAEQ VYVSFVKGSA PKLEEISRMP FSVSAAKANK FYLGIHHLSC LKRAHILLDD EDATPSECKA
901: AAAAIRKEAD INANHPAVTF LGEPKEEDNE ETVAGEEEKS NEDGDADED

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.