Factsheet for TraesCS6D01G076600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G114200.1	Wheat	cytosol	88.56	94.11
HORVU0Hr1G015160.2	Barley	cytosol, nucleus	70.66	85.87
HORVU6Hr1G014320.2	Barley	cytosol	87.28	84.3
HORVU0Hr1G015190.1	Barley	cytosol	15.17	82.27
TraesCS6D01G399700.1	Wheat	cytosol	3.63	63.49
TraesCS6D01G399200.1	Wheat	cytosol	26.88	56.49
TraesCS6D01G399400.1	Wheat	cytosol	44.96	54.4
TraesCS5D01G492200.1	Wheat	cytosol	45.69	53.91
TraesCS7D01G086700.2	Wheat	cytosol	44.6	52.74
TraesCS6D01G386700.1	Wheat	cytosol	42.78	50.48
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	42.14	49.68
TraesCS5D01G557600.2	Wheat	cytosol	41.24	48.5
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	39.96	47.88
Os08t0372700-00	Rice	nucleus	39.51	47.85
Zm00001d007688_P002	Maize	cytosol	17.26	45.35
TraesCS6D01G398700.1	Wheat	plasma membrane	43.23	45.16
TraesCS2D01G545300.1	Wheat	cytosol	31.43	40.56
TraesCS6D01G399500.1	Wheat	plastid	32.43	39.27
TraesCS5D01G032300.1	Wheat	cytosol	30.25	39.27
TraesCS7D01G409800.1	Wheat	cytosol	31.7	39.08
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.26	35.92
TraesCS7D01G412600.1	Wheat	extracellular	14.62	35.86
TraesCS5D01G086400.1	Wheat	cytosol	17.89	35.12
TraesCS5D01G098700.1	Wheat	cytosol	30.25	35.05
TraesCS7D01G486400.1	Wheat	cytosol	29.16	34.78
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	29.25	34.37
TraesCS5D01G557700.1	Wheat	cytosol	29.61	34.35
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	29.88	34.34
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	29.16	34.33
TraesCS5D01G390500.1	Wheat	cytosol	29.34	34.29
TraesCS5D01G557500.1	Wheat	cytosol	29.34	34.18
TraesCS5D01G098800.2	Wheat	plastid	28.25	34.1
TraesCS5D01G548400.1	Wheat	cytosol	28.97	33.79
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	28.97	33.58
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	29.34	33.54
TraesCS5D01G554600.1	Wheat	cytosol	28.7	33.51
TraesCS3D01G076100.1	Wheat	cytosol	28.88	33.4
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	28.79	33.3
TraesCS5D01G548300.1	Wheat	cytosol	28.7	33.3
TraesCS7D01G540600.1	Wheat	cytosol	14.99	33.0
KXG21363	Sorghum	cytosol	35.15	32.91
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	29.43	32.86
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	28.43	32.81
TraesCS5D01G547200.1	Wheat	plastid	27.88	32.62
TraesCS1D01G045300.1	Wheat	cytosol	13.35	32.38
TraesCS1D01G090600.1	Wheat	cytosol	28.61	32.31
TraesCS1D01G019600.1	Wheat	cytosol	15.08	32.17
TraesCS6D01G372900.1	Wheat	cytosol	10.81	32.08
TraesCS1D01G416300.1	Wheat	cytosol	9.81	32.05
TraesCS7D01G116500.1	Wheat	golgi	28.7	31.89
TraesCS7D01G479800.2	Wheat	cytosol	23.07	31.63
TraesCS5D01G547800.1	Wheat	cytosol	22.8	31.49
TraesCS7D01G540500.1	Wheat	cytosol	28.25	31.48
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	28.43	30.96
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	27.43	30.38
TraesCS2D01G585700.1	Wheat	cytosol	23.71	30.03
TraesCS7D01G201200.1	Wheat	cytosol	7.63	30.0
TraesCS7D01G479900.1	Wheat	cytosol	12.9	29.83
TraesCS1D01G416200.1	Wheat	cytosol	12.26	29.74
TraesCS7D01G540000.1	Wheat	mitochondrion	5.27	29.44
TraesCS6D01G399100.1	Wheat	plasma membrane	45.41	25.19

Protein Annotations

EnsemblPlants:TraesCS6D01G076600.1	EnsemblPlantsGene:TraesCS6D01G076600	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:41239190..41243597

Molecular Weight (calculated)

123580.0 Da

IEP (calculated)

4.446

GRAVY (calculated)

-0.282

Length

1101 amino acids

Sequence
(BLAST)

0001: MMVLGRSILM PVKAKRGCDE HGLIRNAIKA QGRVIYSAYT ASASTHNTRA RTRLQFVPAM EMEAAPVSAV TGALKPVLGK LATLMGDEYK RLETARGEEI
0101: KSLADELSAM DAALLDMSGE EDPDAQDKAW MNEARELSYD MEDFIDDFMQ TIHDGDVKPD HDLFMEKMKD LLGKMKARRR TGDGFKEQIN RVSNRDGRYE
0201: TRGTFSNNVH ATVDPAAIAM FELLTKQDGP KAEVIKLLTQ DEADCEPQLA EVDCGHESLL AEEEGECGSK PAEDEDGSEL PLVEEEDGCE SPLTDKDLRE
0301: SLQVEEVEDQ CESPKVEEEE EEEVEEECES PKVEEEDVCE PAPAEEDECE SPQAEEEAPC ELRTRKQPKL VAIVGAGGTA LANRVYEELR VKDFDYWPFI
0401: SMSPNPDMTS TLTALLLELT GELKKEASVQ QLIIDINESL LDKRYLIVLD GICQKETWDV IKHAFPMTSC GIIITTSPCE DIAELCRSWF NGHIYHIRPL
0501: GMVHSRPLFH QRLFNSDDDC HPHLEEVSDK ILEKCDDLPL AILVTSGLLA NTEKTEHLWN HMADSIGCAL ETSDIVERMM KILSLCYFDL HPRVKTCLLY
0601: LSMFPKASTI KMKDLIWKWT AEGFFHGEQR NAAHELGERC FNELLNRSLI QPVKIDQYGK VKSCQVHDTV MDFIISKSAE DNFVTVVGVP CPTIDQTQMK
0701: VRRFSLQATE EGYSFPGINL VLSHARSLKV FGLLWTIPSL DEFKHLRVVD FGGFSNLGDD DLANIGRLFQ LRYLNLSWTG VCELPEEIGH LSCLEMLDLT
0801: ATGVSKLPSS IVNLEKLVHL LIGEFVKFPE GGISKMQALE TLKQVRAFKQ PIQFLQDFGK LQNLWKLNID LTNNQEDTED TKECMKAMAS SLYELGTHNL
0901: RSLTIWNCDY SLLMEEWCPT PVGLQKLTTW QSTFPRVPDW MGSLVNLQQL RFDLERVRYE DLCILGGLPA LLTLSLVGKE MSEGKLTVSG EMGFPMLRDF
1001: TYGMYPGLGI KMMFEAGSMP KLEKLRIDFT PATNGYLYST GGLTGSGPYD FGIENLPSSL TTVVCECKSF DGDCTLEATR AALERAVSTH PSCPALDFSI
1101: Y

Best Arabidopsis Sequence Match ( AT5G35450.1 )
(BLAST)

001: MAEGVVSFGV QKLWALLNRE SERLNGIDEQ VDGLKRQLRG LQSLLKDADA KKHGSDRVRN FLEDVKDLVF DAEDIIESYV LNKLRGEGKG VKNHVRRLAC
101: FLTDRHKVAS DIEGITKRIS KVIGEMQSLG IQQQIIDGGR SLSLQDIQRE IRQTFPNSSE SDLVGVEQSV EELVGPMVEI DNIQVVSISG MGGIGKTTLA
201: RQIFHHDLVR RHFDGFAWVC VSQQFTQKHV WQRILQELRP HDGEILQMDE YTIQGKLFQL LETGRYLVVL DDVWKEEDWD RIKEVFPRKR GWKMLLTSRN
301: EGVGLHADPT CLSFRARILN PKESWKLFER IVPRRNETEY EEMEAIGKEM VTYCGGLPLA VKVLGGLLAN KHTASEWKRV SENIGAQIVG KSCLDDNSLN
401: SVYRILSLSY EDLPTDLKHC FLYLAHFPED YKIKTRTLYS YWAAEGIYDG LTILDSGEDY LEELVRRNLV IAEKSNLSWR LKLCQMHDMM REVCISKAKV
501: ENFLQIIKVP TSTSTIIAQS PSRSRRLTVH SGKAFHILGH KKKVRSLLVL GLKEDLWIQS ASRFQSLPLL RVLDLSSVKF EGGKLPSSIG GLIHLRFLSL
601: HQAVVSHLPS TIRNLKLMLY LNLHVAIGVP VHVPNVLKEM LELRYLSLPL DMHDKTKLEL GDLVNLEYLW CFSTQHSSVT DLLRMTKLRF FGVSFSERCT
701: FENLSSSLRQ FRKLETLSFI YSRKTYMVDY VGEFVLDFIH LKKLSLGVHL SKIPDQHQLP PHIAHIYLLF CHMEEDPMPI LEKLLHLKSV ELRRKAFIGR
801: RMVCSKGGFP QLRALQISEQ SELEEWIVEE GSMPCLRDLI IHSCEKLEEL PDGLKYVTSL KELKIEGMKR EWKEKLVGED YYKVQHIPDV QFFNCDDEQR
901: E

Arabidopsis Description

RPP8L3Disease resistance RPP8-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.