Factsheet for TraesCS5D01G548400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G541400.1	Wheat	cytosol	91.84	92.14
TraesCS5D01G554600.1	Wheat	cytosol	72.03	72.11
TraesCS5D01G547200.1	Wheat	plastid	68.22	68.44
TraesCS5D01G557700.1	Wheat	cytosol	66.95	66.6
TraesCS5D01G557500.1	Wheat	cytosol	65.89	65.82
TraesCS7D01G201200.1	Wheat	cytosol	18.75	63.21
TraesCS6D01G372900.1	Wheat	cytosol	24.68	62.8
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	62.82	62.42
TraesCS5D01G548300.1	Wheat	cytosol	62.39	62.07
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	60.59	61.18
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	61.44	60.23
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	60.81	60.17
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	60.28	59.77
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	61.86	59.23
TraesCS5D01G547800.1	Wheat	cytosol	49.36	58.47
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	59.64	55.69
Os10t0132700-01	Rice	cytosol	16.53	55.52
TraesCS7D01G412600.1	Wheat	extracellular	21.93	46.1
TraesCS6D01G399700.1	Wheat	cytosol	3.07	46.03
TraesCS5D01G086400.1	Wheat	cytosol	25.42	42.78
TraesCS1D01G416300.1	Wheat	cytosol	14.72	41.25
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	41.1	40.5
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	39.94	40.23
TraesCS5D01G098700.1	Wheat	cytosol	40.25	40.0
TraesCS6D01G399400.1	Wheat	cytosol	38.45	39.89
TraesCS6D01G399200.1	Wheat	cytosol	22.03	39.69
TraesCS5D01G390500.1	Wheat	cytosol	39.41	39.49
TraesCS7D01G479800.2	Wheat	cytosol	33.37	39.23
TraesCS5D01G098800.2	Wheat	plastid	37.5	38.82
TraesCS7D01G540600.1	Wheat	cytosol	20.44	38.6
TraesCS5D01G492200.1	Wheat	cytosol	37.82	38.26
TraesCS7D01G086700.2	Wheat	cytosol	37.71	38.24
Os10t0133000-00	Rice	cytosol	6.89	38.01
TraesCS6D01G386700.1	Wheat	cytosol	37.5	37.94
TraesCS7D01G486400.1	Wheat	cytosol	37.08	37.92
TraesCS5D01G557600.2	Wheat	cytosol	37.18	37.5
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	36.44	36.83
TraesCS7D01G116500.1	Wheat	golgi	38.03	36.23
TraesCS7D01G409800.1	Wheat	cytosol	34.22	36.17
TraesCS3D01G076100.1	Wheat	cytosol	36.44	36.13
TraesCS5D01G032300.1	Wheat	cytosol	32.1	35.73
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	37.39	35.51
TraesCS2D01G545300.1	Wheat	cytosol	31.78	35.17
TraesCS6D01G399500.1	Wheat	plastid	33.47	34.76
TraesCS1D01G090600.1	Wheat	cytosol	35.59	34.46
TraesCS7D01G540500.1	Wheat	cytosol	35.7	34.11
TraesCS2D01G585700.1	Wheat	cytosol	31.36	34.06
TraesCS6D01G398700.1	Wheat	plasma membrane	37.61	33.68
TraesCS7D01G540000.1	Wheat	mitochondrion	6.89	32.99
TraesCS7D01G479900.1	Wheat	cytosol	16.53	32.77
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	17.9	31.95
TraesCS1D01G019600.1	Wheat	cytosol	17.27	31.59
TraesCS1D01G045300.1	Wheat	cytosol	14.83	30.84
TraesCS6D01G076600.1	Wheat	cytosol	33.79	28.97
TraesCS1D01G416200.1	Wheat	cytosol	13.45	27.97
TraesCS6D01G399100.1	Wheat	plasma membrane	37.61	17.88

Protein Annotations

EnsemblPlants:TraesCS5D01G548400.1	EnsemblPlantsGene:TraesCS5D01G548400	Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	InterPro:RX-like_CC	PANTHER:PTHR43889	PANTHER:PTHR43889:SF19	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52058	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:556006335..556017062

Molecular Weight (calculated)

105887.0 Da

IEP (calculated)

7.891

GRAVY (calculated)

-0.222

Length

944 amino acids

Sequence
(BLAST)

001: MAVVSAAHGA FGPLLGKLTA LLAEECGRLK GVRREVRSLR SELASMHAAL KEYTKLEDPN DKVKAWISLA RELAYDTEDV FDKLIHHLGD GRDHGGFKDF
101: FRKTVRRLKT LGARRGIAGE IDDLKGRIKQ VKELKDCYKL SDAPDSTTGP TAVDPRLHAF FADEAHLVGV DSPRDDLAKW MLEEENNSSK HCKVLSIVGF
201: GVLGKTTLAN EVYRKIQGKF DCHAFVSVSQ KLDIKKIIKD LISQVSCEDE STKDRSDRDE RKCIAKLREL LQDKRYLIII DDVWSIEAWN AIKCAFPENS
301: CSSRIIATTR IVDVAKSCCP SVVDRVYGTK ALSDLHSRKL FLTRIFGSGN QCPDMLKKVS DAILNKCGGL PLAIVTISSL LANRLATKEE WEKVKRAIGS
401: TLERKQSLEG MSRILSLSYN DLPLHLKTCL LYFSTFPEDY VIDRKRLVRH WIAEGFMSEE CGLSKQEVAE NYFYELINKS MVHPVDIEYD GKVPACRVHD
501: MMLEIIISKS VEDNFVTLVG GGQKNLTNHQ DFIRQLSVQH IDQELASALE KEDLSHVRSL TVTSSVFMKH FPSLTKFEAL RVLDFEGCKG LEQYDISNVD
601: RLFQLKYLSL KDTGISKLPS SIVMLHDLEI LDLRTPSMQE LPTGIILLTK LQYLLTKAYC KVPNGIGNMR SLREAPRFDI TRSSLDTIEE LGNLSRLNKL
701: GLCLDDGDGY KRHEKVLLSL LCKLSSCKLQ SLCIKNRSYG SLDFIDSWSP LPSSLQKLCI YGKMHLANVP KWISPGLTSL AHVNIGLDEL REEDLHTLDE
801: LPSLLYLHLY LATGPKKKLT VTGFPCPRRF GLLSLDGAYI TVQKGAMPKL EKLEQPFDVS VAKAYGFYLG IEHLPCLKVI KVMPRHKGAT FSESKAAAAS
901: IRNEAGVHPN HPENIILGVQ AFLHDEDNVE TGNVEGKSKE EGNY

Best Arabidopsis Sequence Match ( AT1G53350.1 )
(BLAST)

001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH

Arabidopsis Description

RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.