Factsheet for TraesCS5D01G492200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G464000.1	Wheat	cytosol	59.59	76.48
TraesCSU01G071200.1	Wheat	cytosol	46.62	70.27
TraesCS6D01G399700.1	Wheat	cytosol	4.61	68.25
TraesCS6D01G399200.1	Wheat	cytosol	34.73	61.83
TraesCS6D01G399400.1	Wheat	cytosol	60.02	61.54
TraesCS7D01G086700.2	Wheat	cytosol	60.88	61.01
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	59.16	59.1
TraesCS6D01G386700.1	Wheat	cytosol	58.09	58.09
TraesCS5D01G557600.2	Wheat	cytosol	56.27	56.09
Zm00001d007688_P002	Maize	cytosol	24.65	54.89
Os08t0373000-00	Rice	cytosol, endoplasmic reticulum	53.8	54.62
Os08t0372700-00	Rice	nucleus	52.63	54.02
TraesCS6D01G398700.1	Wheat	plasma membrane	60.66	53.7
TraesCS2D01G545300.1	Wheat	cytosol	43.09	47.13
TraesCS6D01G399500.1	Wheat	plastid	45.02	46.2
TraesCS5D01G032300.1	Wheat	cytosol	41.8	45.99
TraesCS6D01G076600.1	Wheat	cytosol	53.91	45.69
TraesCS7D01G412600.1	Wheat	extracellular	21.86	45.43
TraesCS7D01G409800.1	Wheat	cytosol	41.48	43.34
TraesCS5D01G086400.1	Wheat	cytosol	25.72	42.78
TraesCS3D01G076100.1	Wheat	cytosol	40.62	39.81
TraesCS7D01G486400.1	Wheat	cytosol	39.34	39.76
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	39.76	39.59
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	40.41	39.35
TraesCS6D01G372900.1	Wheat	cytosol	15.54	39.08
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	39.98	38.73
TraesCS5D01G098700.1	Wheat	cytosol	39.34	38.63
TraesCS7D01G540600.1	Wheat	cytosol	20.69	38.6
TraesCS1D01G416300.1	Wheat	cytosol	13.93	38.58
KXG21363	Sorghum	cytosol	48.34	38.35
TraesCS1D01G090600.1	Wheat	cytosol	39.66	37.95
TraesCS5D01G548400.1	Wheat	cytosol	38.26	37.82
TraesCS5D01G554600.1	Wheat	cytosol	38.05	37.65
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	21.33	37.62
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	37.62	37.54
TraesCS5D01G390500.1	Wheat	cytosol	37.83	37.47
TraesCS5D01G098800.2	Wheat	plastid	36.55	37.39
TraesCS5D01G557500.1	Wheat	cytosol	37.73	37.25
TraesCS5D01G557700.1	Wheat	cytosol	37.83	37.2
TraesCS5D01G547200.1	Wheat	plastid	37.51	37.19
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	37.94	37.18
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	37.94	37.11
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	37.62	36.95
TraesCS5D01G548300.1	Wheat	cytosol	37.51	36.88
TraesCS7D01G479800.2	Wheat	cytosol	31.19	36.24
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	37.41	35.4
TraesCS5D01G547800.1	Wheat	cytosol	30.23	35.38
TraesCS7D01G116500.1	Wheat	golgi	36.87	34.71
TraesCS1D01G019600.1	Wheat	cytosol	19.19	34.69
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	37.3	34.42
TraesCS7D01G540500.1	Wheat	cytosol	36.12	34.11
TraesCS7D01G201200.1	Wheat	cytosol	10.18	33.93
TraesCS1D01G045300.1	Wheat	cytosol	15.86	32.6
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	34.62	32.49
TraesCS2D01G585700.1	Wheat	cytosol	29.58	31.76
TraesCS7D01G479900.1	Wheat	cytosol	15.86	31.09
TraesCS7D01G540000.1	Wheat	mitochondrion	6.43	30.46
TraesCS6D01G399100.1	Wheat	plasma membrane	60.13	28.26
TraesCS1D01G416200.1	Wheat	cytosol	13.29	27.31

Protein Annotations

EnsemblPlants:TraesCS5D01G492200.1	EnsemblPlantsGene:TraesCS5D01G492200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
InterPro:RX-like_CC	ncoils:Coil	PANTHER:PTHR43889	PANTHER:PTHR43889:SF9	PFAM:PF00931	PRINTS:PR00364
SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52540	TIGR:cd14798	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:525587715..525591052

Molecular Weight (calculated)

105139.0 Da

IEP (calculated)

6.537

GRAVY (calculated)

-0.146

Length

933 amino acids

Sequence
(BLAST)

001: MEGILVSAAT GALDAVLEKL ATLLVNEYKL HKGVRGEIKF LIDELTAMHA FLLKMSEEED PDVQDKVWMT MVRELSYDIE DSIDDFVQGG EGGVDDKDAK
101: PDGFIKKIKH ILGKLGKRKA HHRMFEDLKK QVIEAGERNE RYKTRQVFSN TKNATVDPRA LAIFEDASKL VGMDEPKAEI TEMLTKEDGV ASTQLQQVKM
201: VSIVGSGGMG KTTLANQVYQ DLKGKFECRA FVSVSRNPDM TNILRTILSE VSCQDYAHTE AGSIQQLISK ISGYLAEKRY FIVIDDIWDV KTWNVIKYAL
301: PMTGCDSVII TTTRMSDVAC SCRSSIGGHI YNIRPLNMAH SRQLFHGRLF NSEEECPSSL EKVSDQILKK CDGLPLAIIA ISGLLANTGK TEHLWNQVKD
401: SIGRALERNP SVEWMIKILS LSYYDLPPHL KTCLLYLSIF PEDSIIEKKY LIWRWIAEGF VHKEGRYSAY ELGERCFNEL VNRSLIQPVK LGKYDKVLSC
501: RVHDTILDFI VSKSNEENFV TFVGVPSLTI GTQSRVRRLS MQVEGEGHSA IPTSLILSHV RSLNVFGNTV KIPSIMEFTH LRTLDFGGCS QLENHHLANV
601: GHLFQLRYLD ISRTEVSELP EQIGHLRCLE MLDITGTNIS DLPASIVNLG KLAHLRVSGH VRFPDGIAKM QALETLKWVH AWQSYNFLEE LGQLKNLRRL
701: DLNHMDVAQE HKEVIASSLR KLCTQNLCSL SMWNDHDSIL LNTWCTAPPL NLQKLVTFDS TLPKLPDWIG SLVNLQKLRL QLERIRHEDL CILGALPALL
801: TLGLDGMNDQ SSCEDRRLTV SPEAGFRCLR VFTYMVQEDR MMDLMFTARC MPKLEKLEII FSGNIENESL SSAGAFDFGI ENLSSLVTFR CELDCRGIKG
901: STIDAAKASV ERIVSTHPNN HLNLIFDDGI LRL

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.