Factsheet for TraesCS5D01G098500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G093500.1	Wheat	cytosol, golgi, peroxisome	95.72	97.35
TraesCS5A01G087600.1	Wheat	cytosol	47.91	97.25
TraesCS3D01G485300.2	Wheat	endoplasmic reticulum	77.87	79.62
Os12t0565100-01	Rice	cytosol	53.55	73.29
EES16173	Sorghum	cytosol	67.64	71.76
Os12t0565200-00	Rice	cytosol	17.95	61.87
TraesCS5D01G098700.1	Wheat	cytosol	56.58	57.05
TraesCS5D01G098800.2	Wheat	plastid	53.13	55.81
TraesCS7D01G412600.1	Wheat	extracellular	24.11	51.45
TraesCS5D01G390500.1	Wheat	cytosol	47.91	48.73
TraesCS1D01G416300.1	Wheat	cytosol	16.28	46.29
TraesCS6D01G372900.1	Wheat	cytosol	17.22	44.47
TraesCS5D01G086400.1	Wheat	cytosol	25.57	43.67
TraesCS7D01G540600.1	Wheat	cytosol	22.55	43.2
TraesCS7D01G486400.1	Wheat	cytosol	40.61	42.15
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	42.07	41.85
TraesCS7D01G201200.1	Wheat	cytosol	12.21	41.79
TraesCS6D01G399400.1	Wheat	cytosol	39.67	41.76
TraesCS5D01G548300.1	Wheat	cytosol	41.34	41.73
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	41.23	41.58
TraesCS7D01G116500.1	Wheat	golgi	43.01	41.57
TraesCS5D01G557700.1	Wheat	cytosol	41.02	41.41
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	41.23	41.4
TraesCS5D01G557500.1	Wheat	cytosol	40.81	41.38
TraesCS5D01G554600.1	Wheat	cytosol	40.71	41.36
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	40.29	41.28
TraesCS6D01G399700.1	Wheat	cytosol	2.71	41.27
TraesCS5D01G548400.1	Wheat	cytosol	40.5	41.1
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	40.71	40.97
TraesCS5D01G547200.1	Wheat	plastid	39.77	40.49
TraesCS5D01G492200.1	Wheat	cytosol	39.35	40.41
TraesCS5D01G547800.1	Wheat	cytosol	33.4	40.15
TraesCS7D01G540000.1	Wheat	mitochondrion	8.25	40.1
TraesCS6D01G399200.1	Wheat	cytosol	21.71	39.69
TraesCS6D01G386700.1	Wheat	cytosol	38.62	39.66
TraesCS3D01G076100.1	Wheat	cytosol	39.35	39.6
TraesCS1D01G090600.1	Wheat	cytosol	40.19	39.49
TraesCS6D01G399500.1	Wheat	plastid	37.27	39.27
TraesCS7D01G409800.1	Wheat	cytosol	36.53	39.19
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	37.89	38.87
TraesCS7D01G086700.2	Wheat	cytosol	37.68	38.78
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	39.87	38.74
TraesCS7D01G540500.1	Wheat	cytosol	39.56	38.36
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	40.29	38.18
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	39.46	38.03
TraesCS7D01G479800.2	Wheat	cytosol	31.73	37.86
TraesCS5D01G557600.2	Wheat	cytosol	36.85	37.71
TraesCS1D01G045300.1	Wheat	cytosol	17.85	37.67
TraesCS2D01G585700.1	Wheat	cytosol	33.4	36.82
TraesCS2D01G545300.1	Wheat	cytosol	32.57	36.58
TraesCS5D01G032300.1	Wheat	cytosol	32.36	36.56
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	20.15	36.48
TraesCS1D01G019600.1	Wheat	cytosol	19.62	36.43
TraesCS6D01G398700.1	Wheat	plasma membrane	37.89	34.44
TraesCS1D01G416200.1	Wheat	cytosol	15.87	33.48
TraesCS7D01G479900.1	Wheat	cytosol	15.55	31.3
TraesCS6D01G076600.1	Wheat	cytosol	34.34	29.88
TraesCS6D01G399100.1	Wheat	plasma membrane	39.25	18.94

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF5	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS5D01G098500	EnsemblPlants:TraesCS5D01G098500.1	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr5D:-:109941852..109945445

Molecular Weight (calculated)

108634.0 Da

IEP (calculated)

6.122

GRAVY (calculated)

-0.153

Length

958 amino acids

Sequence
(BLAST)

001: MVSALAGVMT SVIGKLTTLL GEEYAKLKGV HREVEFMKDE LSSMNALLQR LAEVDRDLDV QTKQWRDQVR EMSYDIEDCI DDFMKNLGQT DIAKRAGLVQ
101: SVIQQLKALR ARHQISSQIQ GLKARVEDAS KRRMRYKLDE RTFEHGISRA IDPRLPSLYA EPDGLVGIDK PRDGLIKCLM EGVGASVQQQ KVISIVGPGG
201: LGKTTLANEV YRKLEGQFQC RAFVSLSQQP DVKKILRSIL SQVSQQEYAN IDVWDEEKLI NAIREFLKNK RYFVIIDDIW SNQAWKIIKC ALFPNDVGSK
301: IMTTTRSITI AKLCCSPQHD HVYEIMPLTE ANSKSLFLKR IFGLGDMCPP KLEEVSSEIM KKCGGSPLAI ITVASLLANK ASTNEEWERV YNSIGSTLEK
401: DPGVEEMRKI LSLSYDDLPH HLKTCLLYLS IFPEDCEIKR DQLIRRWIAE GFINTEGGQD LEEIGDGYFC DLINRSMVQP VRIQYDGRVY SCRVHDMILD
501: LLISKSIEEN FVTFFGGQNQ KLVLQHKIRR LSLNCYSREH IAVPSTAIIS HCRSLSIFGY AEQMPPLSKF RVLRVLDIEN GEDMESSFIE HVSTLCQLKY
601: LRLDVRSISA FPEQLGELQH LQTLDIRWTK IRKLPKSIVQ LQNMTCLRVN NLELPEGIGN LHALQELREI KVKWDSLASS LLELGSLTKL RILGLRWCII
701: DTHGNKEIFV ENLVSSLCKL GRLNLRSLCI KSDYGYSIPL KEMYGYSIDF LLDSWFPSPH LLQKFQMDAY YFFPRVPVWI ASLDNLSYLD ININPVEEEA
801: LEILGGLPAL LLLCLSSESS AQKQRLVISS NMFICLNDFR FTCWSNGKGL TFEAGAMPSL EKLEVPLDAG KDLDFGIQHL SSLMHVTVKI ICGGATVQEV
901: EASEDAIKSA VTHLPNHPTL EIRIWGDENM AEVGFKKNMV EEDQGKAEEE IQTSTQLI

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.