Factsheet for TraesCS3D01G485300.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 1
peroxisome 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, peroxisome, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G541100.1	Wheat	endoplasmic reticulum, extracellular	97.44	94.42
HORVU3Hr1G107310.1	Barley	cytosol	49.84	91.57
HORVU5Hr1G058640.1	Barley	peroxisome	24.12	85.28
HORVU7Hr1G060040.1	Barley	cytosol	25.51	83.28
TraesCS5D01G098500.1	Wheat	cytosol, peroxisome, plasma membrane	79.62	77.87
EES16173	Sorghum	cytosol	70.44	73.09
Os12t0565100-01	Rice	cytosol	53.15	71.14
Os12t0565200-00	Rice	cytosol	18.89	63.67
TraesCS5D01G098700.1	Wheat	cytosol	56.99	56.21
TraesCS5D01G098800.2	Wheat	plastid	53.47	54.93
TraesCS7D01G412600.1	Wheat	extracellular	24.87	51.89
TraesCS5D01G390500.1	Wheat	cytosol	48.77	48.51
TraesCS6D01G372900.1	Wheat	cytosol	17.82	45.01
TraesCS1D01G416300.1	Wheat	cytosol	16.01	44.51
TraesCS5D01G086400.1	Wheat	cytosol	26.47	44.21
TraesCS7D01G540600.1	Wheat	cytosol	23.27	43.6
TraesCS1D01G037500.1	Wheat	cytosol, extracellular	43.12	42.35
TraesCS1D01G037400.1	Wheat	golgi, peroxisome	42.69	41.54
TraesCS5D01G546600.1	Wheat	cytosol, golgi, plastid	41.09	41.18
TraesCS7D01G486400.1	Wheat	cytosol	40.55	41.17
TraesCS5D01G557700.1	Wheat	cytosol	41.3	40.78
TraesCS6D01G372800.1	Wheat	extracellular, plasma membrane	41.41	40.76
TraesCS5D01G548300.1	Wheat	cytosol	41.2	40.67
TraesCS6D01G399400.1	Wheat	cytosol	39.49	40.66
TraesCS5D01G554600.1	Wheat	cytosol	40.77	40.51
TraesCS5D01G548200.1	Wheat	endoplasmic reticulum	40.88	40.32
TraesCS5D01G557500.1	Wheat	cytosol	40.55	40.21
TraesCS7D01G201200.1	Wheat	cytosol	11.95	40.0
TraesCS5D01G548400.1	Wheat	cytosol	40.23	39.94
TraesCS1D01G090600.1	Wheat	cytosol	41.41	39.79
TraesCS5D01G492200.1	Wheat	cytosol	39.59	39.76
TraesCS7D01G116500.1	Wheat	golgi	42.05	39.76
TraesCS6D01G399700.1	Wheat	cytosol	2.67	39.68
TraesCS5D01G547800.1	Wheat	cytosol	33.72	39.65
TraesCS7D01G540000.1	Wheat	mitochondrion	8.32	39.59
TraesCS6D01G399200.1	Wheat	cytosol	22.09	39.5
TraesCS3D01G076100.1	Wheat	cytosol	40.13	39.5
TraesCS6D01G399500.1	Wheat	plastid	38.21	39.38
TraesCS7D01G409800.1	Wheat	cytosol	37.03	38.86
TraesCS6D01G386700.1	Wheat	cytosol	38.63	38.8
TraesCS5D01G547200.1	Wheat	plastid	38.63	38.47
TraesCS6D01G386900.1	Wheat	extracellular, plasma membrane	37.99	38.12
TraesCS5D01G548600.1	Wheat	extracellular, plasma membrane	39.91	37.93
TraesCS2D01G487900.1	Wheat	extracellular, nucleus, peroxisome	40.02	37.73
TraesCS7D01G540500.1	Wheat	cytosol	39.7	37.65
TraesCS7D01G086700.2	Wheat	cytosol	37.35	37.59
TraesCS6D01G373000.2	Wheat	cytosol, mitochondrion	40.55	37.59
TraesCS7D01G479800.2	Wheat	cytosol	31.8	37.11
TraesCS2D01G585700.1	Wheat	cytosol	33.94	36.59
TraesCS2D01G545300.1	Wheat	cytosol	33.19	36.46
TraesCS1D01G045300.1	Wheat	cytosol	17.61	36.34
TraesCS1D01G019600.1	Wheat	cytosol	19.85	36.05
TraesCS5D01G557600.2	Wheat	cytosol	35.86	35.9
TraesCS5D01G032300.1	Wheat	cytosol	32.23	35.61
TraesCS6D01G398700.1	Wheat	plasma membrane	38.42	34.16
TraesCS6D01G369800.1	Wheat	cytosol, plasma membrane	19.1	33.84
TraesCS7D01G479900.1	Wheat	cytosol	16.01	31.51
TraesCS1D01G416200.1	Wheat	cytosol	14.83	30.62
TraesCS6D01G076600.1	Wheat	cytosol	34.37	29.25
TraesCS6D01G399100.1	Wheat	plasma membrane	38.74	18.29

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR43889	PANTHER:PTHR43889:SF5	InterPro:RX-like_CC
SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS3D01G485300	EnsemblPlants:TraesCS3D01G485300.2	TIGR:cd14798	SEG:seg

Description

No Description!

Coordinates

chr3D:+:582016151..582019426

Molecular Weight (calculated)

106411.0 Da

IEP (calculated)

5.754

GRAVY (calculated)

-0.160

Length

937 amino acids

Sequence
(BLAST)

001: MVSALAGVMT SVIAKLTALL GEEYAKLKGV HREVEFMKDE LSSMNALLQR LAEVDRDLDV QTKEWRDQVR EMSYDIEDCI DDFMKSLAQT DSAKAAGLVQ
101: SVVQQLKALR ARHQISSQIQ GLKARVEDAS KRRMRYKLDE RAFEPSISRA IDPRLPSLYA EPDGLVGIDK PRSELIECLM EGMGASVQQQ KVISIVGPGG
201: LGKTTLANEV FRKLEGQFQC RAFVSLSQQP DVSKILRNIL SQVCQQELPS TDIQDEGKLI DTIREVLKNK RYLVVIDDIW STQAWKIIKC SLFLNDLGSR
301: IMTTTRSVDI AKSCCSRCHD HVYEIMPLTT ANSKSLFFKR IFGTEDIRPP QLEEVSSEIL KKCGGSPLAI LTIASLLANK DCTNEEWEWV YNSIGSTLGK
401: DPGVEEMRRI LSLSYDDLPH HLKTCLLYLS IFPEDYEIER DRLIRRWIAE GFIDTNGGRD LEEIGECYFN DLINRSMLQP VEIQYDGQVV SCRVHDMILD
501: LLTSKSMEEN FATFFGNQNE ILVLQHKIRR LSLSYYDQEH IMLPSTAIIS HCRSLSIVGY AEKMPSLSKF RVLRVLDIEN GEEMESNCFE HLRKLFQLKY
601: LRLHVRSISA LPEQLGELQH LKTLDMGWTK ITKMPKSIVQ LQHLTCLRVG NLELPEGIGN LQALQELSDI KVNRYSMASC LLELGSLAKL KILGLRWYIV
701: STHSNKGTFV DNLVSSLRKL GRFSLRSICI RSYHGSSTEF LLDSWFPSPH LMQKFQMGTY YNFPRVPPWI ASLDKLTYLD INIDPVDEEA LEILGELPAL
801: LFLWLMSKSA APKQRLIISS SMFVCLREFH FTCWSNGEGL MFEAGAMPRL EKLWVPFDAG SGLDFGIQHL SSLRHLAVEI ICIGATARDV EALEEAIRDA
901: AHLLPNRPAV EFRTWDDEKM VEEEGQGVTE EEIHASG

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.