Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G058640.1 | Barley | peroxisome | 47.06 | 90.57 |
| HORVU7Hr1G060040.1 | Barley | cytosol | 49.22 | 87.46 |
| Os12t0565200-00 | Rice | cytosol | 33.33 | 61.15 |
| TraesCS3D01G485300.2 | Wheat | endoplasmic reticulum | 91.57 | 49.84 |
| TraesCS3B01G541100.1 | Wheat | endoplasmic reticulum, extracellular | 91.37 | 48.19 |
| EES16173 | Sorghum | cytosol | 72.75 | 41.09 |
| HORVU1Hr1G089990.1 | Barley | cytosol | 30.39 | 36.56 |
| HORVU7Hr1G111710.2 | Barley | cytosol | 35.1 | 35.59 |
| HORVU1Hr1G005520.1 | Barley | cytosol | 40.2 | 34.05 |
| HORVU6Hr1G092680.7 | Barley | cytosol | 27.25 | 32.55 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 60.2 | 32.28 |
| HORVU1Hr1G004870.1 | Barley | cytosol | 7.06 | 32.14 |
| HORVU6Hr1G092500.1 | Barley | mitochondrion | 37.45 | 31.41 |
| HORVU7Hr1G111610.1 | Barley | cytosol | 38.04 | 30.08 |
| HORVU1Hr1G089960.1 | Barley | cytosol | 21.18 | 29.43 |
| HORVU6Hr1G092510.2 | Barley | cytosol, plasma membrane | 37.65 | 29.36 |
| HORVU7Hr1G111620.1 | Barley | cytosol, nucleus | 37.65 | 29.31 |
| HORVU7Hr1G121190.1 | Barley | cytosol | 26.27 | 28.39 |
| HORVU1Hr1G002680.2 | Barley | plasma membrane | 36.08 | 28.22 |
| Os12t0565100-01 | Rice | cytosol | 37.65 | 27.43 |
| HORVU0Hr1G017790.1 | Barley | endoplasmic reticulum, golgi | 37.06 | 27.16 |
| HORVU5Hr1G125350.1 | Barley | cytosol | 34.12 | 25.11 |
| HORVU5Hr1G093970.1 | Barley | cytosol | 46.47 | 25.11 |
| HORVU3Hr1G112930.1 | Barley | cytosol | 44.51 | 23.23 |
| HORVU1Hr1G089890.3 | Barley | cytosol | 27.25 | 22.75 |
| HORVU1Hr1G005470.2 | Barley | cytosol | 39.8 | 21.83 |
| HORVU7Hr1G115990.1 | Barley | mitochondrion | 45.69 | 21.74 |
| HORVU6Hr1G075320.1 | Barley | mitochondrion | 38.63 | 20.61 |
| HORVU7Hr1G111630.6 | Barley | cytosol | 37.65 | 20.47 |
| HORVU6Hr1G094170.1 | Barley | mitochondrion | 38.43 | 20.42 |
| HORVU0Hr1G015160.2 | Barley | cytosol, nucleus | 36.08 | 20.31 |
| HORVU7Hr1G111700.2 | Barley | cytosol, mitochondrion, plastid | 37.65 | 20.08 |
| HORVU7Hr1G096640.2 | Barley | cytosol | 35.1 | 20.04 |
| HORVU6Hr1G090470.10 | Barley | extracellular, plasma membrane | 37.06 | 19.89 |
| HORVU6Hr1G084930.1 | Barley | cytosol | 36.08 | 19.6 |
| HORVU6Hr1G094200.2 | Barley | cytosol | 31.96 | 19.38 |
| HORVU5Hr1G007040.1 | Barley | cytosol | 29.22 | 17.61 |
| HORVU5Hr1G006960.7 | Barley | cytosol | 29.02 | 17.51 |
| HORVU6Hr1G090550.1 | Barley | peroxisome | 24.9 | 17.23 |
| HORVU5Hr1G123480.1 | Barley | cytosol | 22.35 | 16.74 |
| HORVU6Hr1G014320.2 | Barley | cytosol | 36.08 | 16.14 |
| HORVU7Hr1G110630.1 | Barley | cytosol | 26.67 | 15.6 |
| HORVU7Hr1G121200.2 | Barley | plastid | 9.02 | 8.58 |
| HORVU1Hr1G089930.4 | Barley | cytosol | 0.39 | 0.71 |
| HORVU7Hr1G111650.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G006150.5 | Barley | plastid | 0.0 | 0.0 |
| HORVU5Hr1G006980.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU0Hr1G015190.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G107310.1 | EnsemblPlantsGene:HORVU3Hr1G107310 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | PANTHER:PTHR43889 | PANTHER:PTHR43889:SF5 |
| PFAM:PF00931 | SEG:seg | SUPFAM:SSF52058 | UniParc:UPI000B46EAF0 | UniProt:A0A287ML44 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr3H:+:672928614..672932121
Molecular Weight (calculated)
58421.0 Da
IEP (calculated)
6.599
GRAVY (calculated)
-0.059
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKILSLSYD DLPHHLKTCL LYLSIFPEDY EIERDRLIRR WIAEGFIDTD DGRDLEEIGE CYFNDLINRS MLEPVKIQYD GQVVSCRVHD MILDLLASKS
101: IEENFATFSG NQNEILVLRH KIRRLSLNYY AQEHTMLPST AIISHCCSLS IVGYAEKMPS LSKFRVLRVL DIENGEEMES NCFEHLRKLF QLRYLRLHVR
201: SISALPEQLG ELQHLRTLDM GWTKITKMPK SIVQLQHLTC LRVSNLELPE GIGNLQALQE LSDIKVNRHS TASCLLELGS LTKLKILGLR WSIVSTHGNE
301: DTFVVNLVSS LRKLGRSSLR SICIRSYHGY TMEFLLDSWF PSPHLMQKFH MGAYYNFPRV PPWIASLDKL TYLDINIDPV EEEALEILGE LPSLLFLWLT
401: SKSAAPKQRL VVSSSMFVRL KELHFTCWSN GQGLMFEAGA MPRLEKLWVP FDAGSGLDFG IQHLSSLTHL AVEIICVGAT ARDVEALEEA IRGAARLLPN
501: RPAVEFRTWD
101: IEENFATFSG NQNEILVLRH KIRRLSLNYY AQEHTMLPST AIISHCCSLS IVGYAEKMPS LSKFRVLRVL DIENGEEMES NCFEHLRKLF QLRYLRLHVR
201: SISALPEQLG ELQHLRTLDM GWTKITKMPK SIVQLQHLTC LRVSNLELPE GIGNLQALQE LSDIKVNRHS TASCLLELGS LTKLKILGLR WSIVSTHGNE
301: DTFVVNLVSS LRKLGRSSLR SICIRSYHGY TMEFLLDSWF PSPHLMQKFH MGAYYNFPRV PPWIASLDKL TYLDINIDPV EEEALEILGE LPSLLFLWLT
401: SKSAAPKQRL VVSSSMFVRL KELHFTCWSN GQGLMFEAGA MPRLEKLWVP FDAGSGLDFG IQHLSSLTHL AVEIICVGAT ARDVEALEEA IRGAARLLPN
501: RPAVEFRTWD
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.