Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G125350.1 | Barley | cytosol | 53.53 | 50.36 |
| HORVU7Hr1G111620.1 | Barley | cytosol, nucleus | 48.62 | 48.4 |
| HORVU7Hr1G111610.1 | Barley | cytosol | 47.85 | 48.37 |
| TraesCS1B01G023000.2 | Wheat | cytosol | 66.41 | 47.07 |
| HORVU7Hr1G111710.2 | Barley | cytosol | 35.43 | 45.92 |
| HORVU1Hr1G089960.1 | Barley | cytosol | 21.63 | 38.42 |
| HORVU3Hr1G107310.1 | Barley | cytosol | 28.22 | 36.08 |
| HORVU6Hr1G092510.2 | Barley | cytosol, plasma membrane | 34.36 | 34.25 |
| HORVU7Hr1G111630.6 | Barley | cytosol | 49.08 | 34.12 |
| HORVU7Hr1G111700.2 | Barley | cytosol, mitochondrion, plastid | 49.39 | 33.68 |
| HORVU6Hr1G092500.1 | Barley | mitochondrion | 31.29 | 33.55 |
| HORVU1Hr1G005520.1 | Barley | cytosol | 30.52 | 33.06 |
| HORVU5Hr1G058640.1 | Barley | peroxisome | 13.34 | 32.83 |
| HORVU7Hr1G060040.1 | Barley | cytosol | 14.26 | 32.4 |
| HORVU0Hr1G017790.1 | Barley | endoplasmic reticulum, golgi | 34.2 | 32.04 |
| HORVU1Hr1G089990.1 | Barley | cytosol | 20.71 | 31.84 |
| Zm00001d007323_P001 | Maize | cytosol | 45.86 | 31.05 |
| HORVU1Hr1G004870.1 | Barley | cytosol | 5.21 | 30.36 |
| HORVU6Hr1G092680.7 | Barley | cytosol | 19.02 | 29.04 |
| HORVU7Hr1G121190.1 | Barley | cytosol | 20.4 | 28.18 |
| HORVU7Hr1G096640.2 | Barley | cytosol | 36.66 | 26.76 |
| HORVU5Hr1G022730.3 | Barley | cytosol | 37.73 | 25.87 |
| HORVU5Hr1G093970.1 | Barley | cytosol | 37.27 | 25.74 |
| HORVU6Hr1G094200.2 | Barley | cytosol | 32.21 | 24.97 |
| HORVU6Hr1G084930.1 | Barley | cytosol | 35.89 | 24.92 |
| HORVU6Hr1G075320.1 | Barley | mitochondrion | 36.35 | 24.79 |
| HORVU6Hr1G090550.1 | Barley | peroxisome | 27.91 | 24.69 |
| HORVU6Hr1G094170.1 | Barley | mitochondrion | 35.89 | 24.38 |
| HORVU6Hr1G090470.10 | Barley | extracellular, plasma membrane | 34.97 | 24.0 |
| HORVU5Hr1G123480.1 | Barley | cytosol | 25.0 | 23.94 |
| HORVU1Hr1G005470.2 | Barley | cytosol | 33.44 | 23.44 |
| HORVU5Hr1G007040.1 | Barley | cytosol | 30.37 | 23.4 |
| HORVU0Hr1G015160.2 | Barley | cytosol, nucleus | 32.52 | 23.4 |
| HORVU5Hr1G006960.7 | Barley | cytosol | 30.06 | 23.2 |
| HORVU3Hr1G112930.1 | Barley | cytosol | 34.2 | 22.82 |
| HORVU7Hr1G115990.1 | Barley | mitochondrion | 35.58 | 21.64 |
| HORVU1Hr1G089890.3 | Barley | cytosol | 20.25 | 21.6 |
| HORVU7Hr1G110630.1 | Barley | cytosol | 27.45 | 20.53 |
| HORVU6Hr1G014320.2 | Barley | cytosol | 32.52 | 18.6 |
| HORVU7Hr1G121200.2 | Barley | plastid | 15.03 | 18.28 |
| HORVU7Hr1G006150.5 | Barley | plastid | 9.05 | 10.71 |
| HORVU1Hr1G089930.4 | Barley | cytosol | 0.77 | 1.77 |
| HORVU7Hr1G111650.1 | Barley | cytosol | 0.31 | 1.53 |
| HORVU5Hr1G006980.1 | Barley | cytosol | 0.31 | 0.75 |
| HORVU0Hr1G015190.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G002680.2 | EnsemblPlantsGene:HORVU1Hr1G002680 | Gene3D:1.10.8.430 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR43889 | PANTHER:PTHR43889:SF16 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF52540 | UniParc:UPI000B482834 | UniProt:A0A287EGN5 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:5275899..5279695
Molecular Weight (calculated)
73897.8 Da
IEP (calculated)
7.165
GRAVY (calculated)
-0.090
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: LQLLGVQQMP WGYLIVIDDI WDVPTWKLLE CAFVKGCHGN RLMRTTRNNN VAISCCSSSR NLVYKIKPLS HADSKRLLFK RIFGGEESCP SNLKEASTDI
101: LRKCGGLPLA INVTSSLLAT RKTEQKWNEV RSRITSAEGI GSHMKHILSM SYFYLPLYLR SCLLYLTMFP EDYEVQKECL VHRWISEGFI CGKDGEDLVE
201: LGDTYFYELV NRNLIEPVEV DYNGKASSCR VHDIMLDLLI DLSNGENFSS LLSNKANLAR RIRRLSLMGN EDEGIIEQLD VSHARSLGVF RPTKQLPSLM
301: KSDVLHVLDL SGCRGLENHH VRDIGRLVQL RYLNIHGTSI NELPKKIGDL EYLETLYVDP GMIVLPESVS RLKRLTRLYV GTGTKLPDVI GNMENLQELR
401: SINPFLQSTS FPEELGKLIN LRKLGIHWRT SRSVGSSYKE KLVSSLCKLE NFNLRTLNIS FWLDEEDDFI RDFGFPRLNS VRTIRLWVGK FCWIAKCMLS
501: HANLQDLGIM SGKIEQQDVE TAGSISTLAE FGVFPACEGP VTITSRGFQQ LQEFRFTWFN GLMFEAGAMP NLKELALTIP MYMLNYSESC FDFGIQHLAS
601: LATIHVQIDC RAVKAADVAA LVCVLKSMAV AHPNRPALKM RTICEEDMLP DE
101: LRKCGGLPLA INVTSSLLAT RKTEQKWNEV RSRITSAEGI GSHMKHILSM SYFYLPLYLR SCLLYLTMFP EDYEVQKECL VHRWISEGFI CGKDGEDLVE
201: LGDTYFYELV NRNLIEPVEV DYNGKASSCR VHDIMLDLLI DLSNGENFSS LLSNKANLAR RIRRLSLMGN EDEGIIEQLD VSHARSLGVF RPTKQLPSLM
301: KSDVLHVLDL SGCRGLENHH VRDIGRLVQL RYLNIHGTSI NELPKKIGDL EYLETLYVDP GMIVLPESVS RLKRLTRLYV GTGTKLPDVI GNMENLQELR
401: SINPFLQSTS FPEELGKLIN LRKLGIHWRT SRSVGSSYKE KLVSSLCKLE NFNLRTLNIS FWLDEEDDFI RDFGFPRLNS VRTIRLWVGK FCWIAKCMLS
501: HANLQDLGIM SGKIEQQDVE TAGSISTLAE FGVFPACEGP VTITSRGFQQ LQEFRFTWFN GLMFEAGAMP NLKELALTIP MYMLNYSESC FDFGIQHLAS
601: LATIHVQIDC RAVKAADVAA LVCVLKSMAV AHPNRPALKM RTICEEDMLP DE
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.